BLASTX nr result

ID: Panax24_contig00010083 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00010083
         (440 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AIZ00598.1 geranylgeranyl pyrophosphate synthase [Panax notogins...   105   2e-24
XP_016542878.1 PREDICTED: heterodimeric geranylgeranyl pyrophosp...    98   1e-21
APY22350.1 geranylgeranyl diphosphate synthase, partial [Hedera ...    95   7e-21
NP_001312125.1 heterodimeric geranylgeranyl pyrophosphate syntha...    94   2e-20
XP_017257890.1 PREDICTED: heterodimeric geranylgeranyl pyrophosp...    94   6e-20
XP_011046617.1 PREDICTED: heterodimeric geranylgeranyl pyrophosp...    93   8e-20
XP_004246572.1 PREDICTED: heterodimeric geranylgeranyl pyrophosp...    92   1e-19
XP_019250805.1 PREDICTED: heterodimeric geranylgeranyl pyrophosp...    91   4e-19
AET07432.1 geranylgeranyl pyrophosphate synthase, partial [Ipomo...    85   7e-19
KZV35923.1 geranylgeranyl pyrophosphate synthase family protein ...    91   7e-19
AMK51093.1 chloroplast geranylgeranyl pyrophosphate synthase 1 [...    90   9e-19
XP_006341179.1 PREDICTED: heterodimeric geranylgeranyl pyrophosp...    90   1e-18
XP_011045566.1 PREDICTED: heterodimeric geranylgeranyl pyrophosp...    90   1e-18
XP_002529802.1 PREDICTED: heterodimeric geranylgeranyl pyrophosp...    90   1e-18
XP_002306207.2 hypothetical protein POPTR_0004s18610g [Populus t...    90   1e-18
XP_016445326.1 PREDICTED: heterodimeric geranylgeranyl pyrophosp...    90   1e-18
XP_009589555.1 PREDICTED: heterodimeric geranylgeranyl pyrophosp...    90   1e-18
XP_011092951.1 PREDICTED: heterodimeric geranylgeranyl pyrophosp...    89   2e-18
XP_018853159.1 PREDICTED: heterodimeric geranylgeranyl pyrophosp...    89   2e-18
XP_012833776.1 PREDICTED: heterodimeric geranylgeranyl pyrophosp...    89   2e-18

>AIZ00598.1 geranylgeranyl pyrophosphate synthase [Panax notoginseng]
          Length = 343

 Score =  105 bits (262), Expect = 2e-24
 Identities = 49/56 (87%), Positives = 55/56 (98%)
 Frame = -2

Query: 439 YVSVYGVEKAMEVAEDLRKRAKRELDSFDKYGDKVLPLYNFVDYAADRGFSLGNQI 272
           YVSVYGVEKAMEVAEDLRKRAKRELDSFDKYG++VLPLY+FVDYA DRGFS+G+Q+
Sbjct: 288 YVSVYGVEKAMEVAEDLRKRAKRELDSFDKYGERVLPLYSFVDYAVDRGFSVGDQV 343


>XP_016542878.1 PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic [Capsicum annuum]
           XP_016542879.1 PREDICTED: heterodimeric geranylgeranyl
           pyrophosphate synthase small subunit, chloroplastic
           [Capsicum annuum] XP_016542880.1 PREDICTED:
           heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic [Capsicum annuum]
           XP_016542881.1 PREDICTED: heterodimeric geranylgeranyl
           pyrophosphate synthase small subunit, chloroplastic
           [Capsicum annuum] XP_016542882.1 PREDICTED:
           heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic [Capsicum annuum]
          Length = 336

 Score = 98.2 bits (243), Expect = 1e-21
 Identities = 45/56 (80%), Positives = 52/56 (92%)
 Frame = -2

Query: 439 YVSVYGVEKAMEVAEDLRKRAKRELDSFDKYGDKVLPLYNFVDYAADRGFSLGNQI 272
           YVSVYGVEKAMEVAEDLR +AKRELD F+KYGDKV+PLY+FVDYAADRGF++  Q+
Sbjct: 281 YVSVYGVEKAMEVAEDLRTQAKRELDGFEKYGDKVMPLYSFVDYAADRGFTIDTQV 336


>APY22350.1 geranylgeranyl diphosphate synthase, partial [Hedera helix]
          Length = 290

 Score = 95.1 bits (235), Expect = 7e-21
 Identities = 45/56 (80%), Positives = 51/56 (91%)
 Frame = -2

Query: 439 YVSVYGVEKAMEVAEDLRKRAKRELDSFDKYGDKVLPLYNFVDYAADRGFSLGNQI 272
           YVSVYGVEKAMEVAEDLRKRAK  L SFDKYG++VLPLY+FVDYA DRGFS+G+ +
Sbjct: 235 YVSVYGVEKAMEVAEDLRKRAKTGLVSFDKYGERVLPLYSFVDYAVDRGFSVGDHV 290


>NP_001312125.1 heterodimeric geranylgeranyl pyrophosphate synthase small subunit,
           chloroplastic-like [Nicotiana tabacum] XP_009788757.1
           PREDICTED: heterodimeric geranylgeranyl pyrophosphate
           synthase small subunit, chloroplastic-like [Nicotiana
           sylvestris] XP_009788758.1 PREDICTED: heterodimeric
           geranylgeranyl pyrophosphate synthase small subunit,
           chloroplastic-like [Nicotiana sylvestris] XP_009788759.1
           PREDICTED: heterodimeric geranylgeranyl pyrophosphate
           synthase small subunit, chloroplastic-like [Nicotiana
           sylvestris] XP_016450347.1 PREDICTED: heterodimeric
           geranylgeranyl pyrophosphate synthase small subunit,
           chloroplastic-like [Nicotiana tabacum] XP_016450348.1
           PREDICTED: heterodimeric geranylgeranyl pyrophosphate
           synthase small subunit, chloroplastic-like [Nicotiana
           tabacum] AIC77784.1 geranylgeranyl pyrophosphate
           synthase 5 [Nicotiana tabacum] AIC77785.1 geranylgeranyl
           pyrophosphate synthase 5 [Nicotiana tabacum]
          Length = 332

 Score = 94.4 bits (233), Expect = 2e-20
 Identities = 44/54 (81%), Positives = 49/54 (90%)
 Frame = -2

Query: 439 YVSVYGVEKAMEVAEDLRKRAKRELDSFDKYGDKVLPLYNFVDYAADRGFSLGN 278
           YVS+YG+EKAMEVAEDLR +AKRELD   KYGDKV+PLY+FVDYAADRGFSL N
Sbjct: 279 YVSLYGIEKAMEVAEDLRAQAKRELDGLKKYGDKVIPLYSFVDYAADRGFSLDN 332


>XP_017257890.1 PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic-like [Daucus carota subsp.
           sativus] KZM89807.1 geranylgeranyl pyrophosphate
           synthase [Daucus carota subsp. sativus]
          Length = 344

 Score = 93.6 bits (231), Expect = 6e-20
 Identities = 43/55 (78%), Positives = 51/55 (92%)
 Frame = -2

Query: 439 YVSVYGVEKAMEVAEDLRKRAKRELDSFDKYGDKVLPLYNFVDYAADRGFSLGNQ 275
           YV VYGVEKAMEVAE+LR RAKRELDSF+KYG+++LPLY+FVDYAADR F++G Q
Sbjct: 289 YVRVYGVEKAMEVAEELRGRAKRELDSFEKYGERLLPLYSFVDYAADRSFTIGGQ 343


>XP_011046617.1 PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic-like [Populus euphratica]
          Length = 347

 Score = 93.2 bits (230), Expect = 8e-20
 Identities = 43/56 (76%), Positives = 50/56 (89%)
 Frame = -2

Query: 439 YVSVYGVEKAMEVAEDLRKRAKRELDSFDKYGDKVLPLYNFVDYAADRGFSLGNQI 272
           YV+VYGVEKA EVAE+LR +AK+ELD F+KYGD V+PLY+FVDYAADRGFSLG  I
Sbjct: 292 YVAVYGVEKAAEVAEELRAKAKKELDGFEKYGDSVVPLYSFVDYAADRGFSLGESI 347


>XP_004246572.1 PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic [Solanum lycopersicum]
           XP_010325942.1 PREDICTED: heterodimeric geranylgeranyl
           pyrophosphate synthase small subunit, chloroplastic
           [Solanum lycopersicum] XP_010325943.1 PREDICTED:
           heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic [Solanum lycopersicum]
          Length = 334

 Score = 92.4 bits (228), Expect = 1e-19
 Identities = 41/56 (73%), Positives = 51/56 (91%)
 Frame = -2

Query: 439 YVSVYGVEKAMEVAEDLRKRAKRELDSFDKYGDKVLPLYNFVDYAADRGFSLGNQI 272
           YVSVYG+EKA++VAEDLR +AKRELD  +KYGDKV+PLY+F+DYAADRGFS+  Q+
Sbjct: 279 YVSVYGIEKAVKVAEDLRAQAKRELDGLEKYGDKVMPLYSFLDYAADRGFSIDGQV 334


>XP_019250805.1 PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic-like [Nicotiana attenuata]
           XP_019250806.1 PREDICTED: heterodimeric geranylgeranyl
           pyrophosphate synthase small subunit, chloroplastic-like
           [Nicotiana attenuata] XP_019250807.1 PREDICTED:
           heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic-like [Nicotiana attenuata]
           XP_019250808.1 PREDICTED: heterodimeric geranylgeranyl
           pyrophosphate synthase small subunit, chloroplastic-like
           [Nicotiana attenuata] OIT01464.1 heterodimeric
           geranylgeranyl pyrophosphate synthase small subunit,
           chloroplastic [Nicotiana attenuata]
          Length = 332

 Score = 91.3 bits (225), Expect = 4e-19
 Identities = 42/54 (77%), Positives = 49/54 (90%)
 Frame = -2

Query: 439 YVSVYGVEKAMEVAEDLRKRAKRELDSFDKYGDKVLPLYNFVDYAADRGFSLGN 278
           YVS+YG+EKA +VAEDLR +AKRELD  +KYGDKV+PLY+FVDYAADRGFSL N
Sbjct: 279 YVSLYGIEKAKKVAEDLRAQAKRELDGLEKYGDKVIPLYSFVDYAADRGFSLHN 332


>AET07432.1 geranylgeranyl pyrophosphate synthase, partial [Ipomoea batatas]
          Length = 83

 Score = 84.7 bits (208), Expect = 7e-19
 Identities = 39/52 (75%), Positives = 49/52 (94%)
 Frame = -2

Query: 439 YVSVYGVEKAMEVAEDLRKRAKRELDSFDKYGDKVLPLYNFVDYAADRGFSL 284
           YVSVYGVEKAMEVAE+LR +AK+ELD+ +KYGDKV+PL++FVDYAA RGF++
Sbjct: 29  YVSVYGVEKAMEVAEELRGQAKKELDALEKYGDKVIPLHSFVDYAAYRGFNV 80


>KZV35923.1 geranylgeranyl pyrophosphate synthase family protein [Dorcoceras
           hygrometricum]
          Length = 331

 Score = 90.5 bits (223), Expect = 7e-19
 Identities = 40/56 (71%), Positives = 49/56 (87%)
 Frame = -2

Query: 439 YVSVYGVEKAMEVAEDLRKRAKRELDSFDKYGDKVLPLYNFVDYAADRGFSLGNQI 272
           YVS YGVEKAMEVAEDL+ +AKR LD  +KYG++V+PLY+FVDYAADRGFS+G  +
Sbjct: 276 YVSAYGVEKAMEVAEDLKSQAKRALDGLEKYGERVMPLYSFVDYAADRGFSIGESV 331


>AMK51093.1 chloroplast geranylgeranyl pyrophosphate synthase 1 [Rehmannia
           glutinosa]
          Length = 328

 Score = 90.1 bits (222), Expect = 9e-19
 Identities = 41/51 (80%), Positives = 49/51 (96%)
 Frame = -2

Query: 439 YVSVYGVEKAMEVAEDLRKRAKRELDSFDKYGDKVLPLYNFVDYAADRGFS 287
           YVS+YGV+KAMEVAEDLR +AK+ELD+ +KYG+KVLPLY+FVDYAADRGFS
Sbjct: 273 YVSLYGVDKAMEVAEDLRSQAKKELDALEKYGEKVLPLYSFVDYAADRGFS 323


>XP_006341179.1 PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic-like [Solanum tuberosum]
           XP_006341180.1 PREDICTED: heterodimeric geranylgeranyl
           pyrophosphate synthase small subunit, chloroplastic-like
           [Solanum tuberosum] XP_006341181.1 PREDICTED:
           heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic-like [Solanum tuberosum]
          Length = 334

 Score = 90.1 bits (222), Expect = 1e-18
 Identities = 40/56 (71%), Positives = 51/56 (91%)
 Frame = -2

Query: 439 YVSVYGVEKAMEVAEDLRKRAKRELDSFDKYGDKVLPLYNFVDYAADRGFSLGNQI 272
           YVSVYG+EKA++VAEDL  +AKRELD  +KYGDKV+PLY+F+DYAADRGFS+ +Q+
Sbjct: 279 YVSVYGIEKAVKVAEDLGAQAKRELDGLEKYGDKVMPLYSFLDYAADRGFSIDDQV 334


>XP_011045566.1 PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic [Populus euphratica]
          Length = 345

 Score = 90.1 bits (222), Expect = 1e-18
 Identities = 41/53 (77%), Positives = 48/53 (90%)
 Frame = -2

Query: 439 YVSVYGVEKAMEVAEDLRKRAKRELDSFDKYGDKVLPLYNFVDYAADRGFSLG 281
           YV+ YGVEKA+EVAE+LR +AK+ELD F+KYGD VLPLY+FVDYAADRGFS G
Sbjct: 290 YVAFYGVEKAIEVAEELRAKAKKELDGFEKYGDSVLPLYSFVDYAADRGFSFG 342


>XP_002529802.1 PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic [Ricinus communis]
           EEF32584.1 geranyl geranyl pyrophosphate synthase,
           putative [Ricinus communis]
          Length = 345

 Score = 90.1 bits (222), Expect = 1e-18
 Identities = 40/53 (75%), Positives = 49/53 (92%)
 Frame = -2

Query: 439 YVSVYGVEKAMEVAEDLRKRAKRELDSFDKYGDKVLPLYNFVDYAADRGFSLG 281
           YVS+YG+EKAMEVAE+LR +AK+ELD F KYGD V+PLY+FVDYAADRGF++G
Sbjct: 290 YVSLYGIEKAMEVAEELRTQAKKELDGFAKYGDSVMPLYSFVDYAADRGFTIG 342


>XP_002306207.2 hypothetical protein POPTR_0004s18610g [Populus trichocarpa]
           EEE86718.2 hypothetical protein POPTR_0004s18610g
           [Populus trichocarpa]
          Length = 347

 Score = 90.1 bits (222), Expect = 1e-18
 Identities = 41/56 (73%), Positives = 49/56 (87%)
 Frame = -2

Query: 439 YVSVYGVEKAMEVAEDLRKRAKRELDSFDKYGDKVLPLYNFVDYAADRGFSLGNQI 272
           YV+VYGVEKA EVAE+LR +AK+ELD F+KYG+ V+PLY+FVDYAADRGFS G  I
Sbjct: 292 YVAVYGVEKATEVAEELRAKAKKELDGFEKYGESVVPLYSFVDYAADRGFSFGESI 347


>XP_016445326.1 PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic-like [Nicotiana tabacum]
           XP_016445327.1 PREDICTED: heterodimeric geranylgeranyl
           pyrophosphate synthase small subunit, chloroplastic-like
           [Nicotiana tabacum]
          Length = 332

 Score = 89.7 bits (221), Expect = 1e-18
 Identities = 41/54 (75%), Positives = 48/54 (88%)
 Frame = -2

Query: 439 YVSVYGVEKAMEVAEDLRKRAKRELDSFDKYGDKVLPLYNFVDYAADRGFSLGN 278
           YVS+YG+EKA ++AEDLR +AKRELD   KYGDKV+PLY+FVDYAADRGFSL N
Sbjct: 279 YVSLYGIEKAKKIAEDLRAQAKRELDGLAKYGDKVIPLYSFVDYAADRGFSLDN 332


>XP_009589555.1 PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic-like [Nicotiana
           tomentosiformis] XP_009589556.1 PREDICTED: heterodimeric
           geranylgeranyl pyrophosphate synthase small subunit,
           chloroplastic-like [Nicotiana tomentosiformis]
          Length = 332

 Score = 89.7 bits (221), Expect = 1e-18
 Identities = 41/54 (75%), Positives = 48/54 (88%)
 Frame = -2

Query: 439 YVSVYGVEKAMEVAEDLRKRAKRELDSFDKYGDKVLPLYNFVDYAADRGFSLGN 278
           YVS+YG+EKA ++AEDLR +AKRELD   KYGDKV+PLY+FVDYAADRGFSL N
Sbjct: 279 YVSLYGIEKAKKIAEDLRAQAKRELDGLAKYGDKVIPLYSFVDYAADRGFSLDN 332


>XP_011092951.1 PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic [Sesamum indicum]
          Length = 332

 Score = 89.4 bits (220), Expect = 2e-18
 Identities = 41/51 (80%), Positives = 48/51 (94%)
 Frame = -2

Query: 439 YVSVYGVEKAMEVAEDLRKRAKRELDSFDKYGDKVLPLYNFVDYAADRGFS 287
           YVSVYGVEKA+EVAEDLR +AK+ELD  ++YG+KVLPLY+FVDYAADRGFS
Sbjct: 277 YVSVYGVEKAIEVAEDLRSQAKKELDGLERYGEKVLPLYSFVDYAADRGFS 327


>XP_018853159.1 PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic-like [Juglans regia]
          Length = 334

 Score = 89.4 bits (220), Expect = 2e-18
 Identities = 40/54 (74%), Positives = 50/54 (92%)
 Frame = -2

Query: 439 YVSVYGVEKAMEVAEDLRKRAKRELDSFDKYGDKVLPLYNFVDYAADRGFSLGN 278
           YV VYGV+KAMEVAE+LR +AKREL+ F+KYG+ V+PLY+FVDYAADRGFS+G+
Sbjct: 279 YVGVYGVDKAMEVAEELRAKAKRELNGFEKYGESVVPLYSFVDYAADRGFSVGD 332


>XP_012833776.1 PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase
           small subunit, chloroplastic [Erythranthe guttata]
           EYU40459.1 hypothetical protein MIMGU_mgv1a009868mg
           [Erythranthe guttata]
          Length = 329

 Score = 89.0 bits (219), Expect = 2e-18
 Identities = 41/51 (80%), Positives = 47/51 (92%)
 Frame = -2

Query: 439 YVSVYGVEKAMEVAEDLRKRAKRELDSFDKYGDKVLPLYNFVDYAADRGFS 287
           YVS+YGVEKAMEVAE+LR  AK+ELD  +KYG+KVLPLY+FVDYAADRGFS
Sbjct: 277 YVSIYGVEKAMEVAEELRAEAKKELDCLEKYGEKVLPLYSFVDYAADRGFS 327


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