BLASTX nr result
ID: Panax24_contig00008995
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00008995
(530 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_019244907.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 85 3e-16
XP_019244906.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 85 3e-16
XP_016568333.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 83 2e-15
XP_016568332.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 82 3e-15
OIT03965.1 rna uridine synthase 2, chloroplastic [Nicotiana atte... 82 6e-15
XP_016492071.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 82 6e-15
XP_009798870.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 82 6e-15
XP_019244908.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 82 6e-15
XP_016493442.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 80 1e-14
XP_009620048.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 80 1e-14
XP_019186766.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 80 1e-14
XP_010320443.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 80 2e-14
XP_006342081.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 80 3e-14
XP_015161913.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 80 3e-14
XP_010320444.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 79 4e-14
XP_004238386.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 79 4e-14
XP_017215057.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 79 7e-14
XP_015073900.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 77 2e-13
XP_015073899.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 77 3e-13
KZM89696.1 hypothetical protein DCAR_022941 [Daucus carota subsp... 74 2e-12
>XP_019244907.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Nicotiana attenuata]
Length = 440
Score = 85.1 bits (209), Expect = 3e-16
Identities = 40/58 (68%), Positives = 46/58 (79%)
Frame = +1
Query: 1 SRLERPCLHALTLGFMHPLTGDKVSFSRLPPEDFAEVLSRLRAISTEKLINQGEGSPL 174
S +ERPCLHALTLGF HP TG+ + F+RLPP DFAEVLS LRAISTEK+ + SPL
Sbjct: 382 SGIERPCLHALTLGFKHPYTGENIHFTRLPPADFAEVLSELRAISTEKVTRLHKSSPL 439
>XP_019244906.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Nicotiana attenuata]
Length = 446
Score = 85.1 bits (209), Expect = 3e-16
Identities = 40/58 (68%), Positives = 46/58 (79%)
Frame = +1
Query: 1 SRLERPCLHALTLGFMHPLTGDKVSFSRLPPEDFAEVLSRLRAISTEKLINQGEGSPL 174
S +ERPCLHALTLGF HP TG+ + F+RLPP DFAEVLS LRAISTEK+ + SPL
Sbjct: 388 SGIERPCLHALTLGFKHPYTGENIHFTRLPPADFAEVLSELRAISTEKVTRLHKSSPL 445
>XP_016568333.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Capsicum annuum]
Length = 424
Score = 83.2 bits (204), Expect = 2e-15
Identities = 36/50 (72%), Positives = 44/50 (88%)
Frame = +1
Query: 1 SRLERPCLHALTLGFMHPLTGDKVSFSRLPPEDFAEVLSRLRAISTEKLI 150
SR+ERPCLHALTLGF HP TG+ + F+RLPP DFAE+LS LRAI+TEK++
Sbjct: 375 SRIERPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSELRAINTEKVL 424
>XP_016568332.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Capsicum annuum]
Length = 429
Score = 82.4 bits (202), Expect = 3e-15
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = +1
Query: 1 SRLERPCLHALTLGFMHPLTGDKVSFSRLPPEDFAEVLSRLRAISTEKL 147
SR+ERPCLHALTLGF HP TG+ + F+RLPP DFAE+LS LRAI+TEK+
Sbjct: 375 SRIERPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSELRAINTEKV 423
>OIT03965.1 rna uridine synthase 2, chloroplastic [Nicotiana attenuata]
Length = 431
Score = 81.6 bits (200), Expect = 6e-15
Identities = 37/50 (74%), Positives = 43/50 (86%)
Frame = +1
Query: 1 SRLERPCLHALTLGFMHPLTGDKVSFSRLPPEDFAEVLSRLRAISTEKLI 150
S +ERPCLHALTLGF HP TG+ + F+RLPP DFAEVLS LRAISTEK++
Sbjct: 382 SGIERPCLHALTLGFKHPYTGENIHFTRLPPADFAEVLSELRAISTEKVL 431
>XP_016492071.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
[Nicotiana tabacum]
Length = 431
Score = 81.6 bits (200), Expect = 6e-15
Identities = 37/50 (74%), Positives = 43/50 (86%)
Frame = +1
Query: 1 SRLERPCLHALTLGFMHPLTGDKVSFSRLPPEDFAEVLSRLRAISTEKLI 150
S +ERPCLHALTLGF HP TG+ + F+RLPP DFAEVLS LRAISTEK++
Sbjct: 382 SGIERPCLHALTLGFRHPYTGENIHFTRLPPADFAEVLSELRAISTEKVL 431
>XP_009798870.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Nicotiana
sylvestris]
Length = 431
Score = 81.6 bits (200), Expect = 6e-15
Identities = 37/50 (74%), Positives = 43/50 (86%)
Frame = +1
Query: 1 SRLERPCLHALTLGFMHPLTGDKVSFSRLPPEDFAEVLSRLRAISTEKLI 150
S +ERPCLHALTLGF HP TG+ + F+RLPP DFAEVLS LRAISTEK++
Sbjct: 382 SGIERPCLHALTLGFRHPYTGENIHFTRLPPADFAEVLSELRAISTEKVL 431
>XP_019244908.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3
[Nicotiana attenuata]
Length = 437
Score = 81.6 bits (200), Expect = 6e-15
Identities = 37/50 (74%), Positives = 43/50 (86%)
Frame = +1
Query: 1 SRLERPCLHALTLGFMHPLTGDKVSFSRLPPEDFAEVLSRLRAISTEKLI 150
S +ERPCLHALTLGF HP TG+ + F+RLPP DFAEVLS LRAISTEK++
Sbjct: 388 SGIERPCLHALTLGFKHPYTGENIHFTRLPPADFAEVLSELRAISTEKVL 437
>XP_016493442.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
[Nicotiana tabacum]
Length = 431
Score = 80.5 bits (197), Expect = 1e-14
Identities = 36/50 (72%), Positives = 43/50 (86%)
Frame = +1
Query: 1 SRLERPCLHALTLGFMHPLTGDKVSFSRLPPEDFAEVLSRLRAISTEKLI 150
S +ERPCLHALTLGF HP TG+ + F+RLPP DFAEVL+ LRAISTEK++
Sbjct: 382 SGIERPCLHALTLGFRHPYTGENIHFTRLPPADFAEVLTELRAISTEKVL 431
>XP_009620048.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Nicotiana
tomentosiformis]
Length = 431
Score = 80.5 bits (197), Expect = 1e-14
Identities = 36/50 (72%), Positives = 43/50 (86%)
Frame = +1
Query: 1 SRLERPCLHALTLGFMHPLTGDKVSFSRLPPEDFAEVLSRLRAISTEKLI 150
S +ERPCLHALTLGF HP TG+ + F+RLPP DFAEVL+ LRAISTEK++
Sbjct: 382 SGIERPCLHALTLGFRHPYTGENIHFTRLPPADFAEVLTELRAISTEKVL 431
>XP_019186766.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Ipomoea nil]
Length = 453
Score = 80.5 bits (197), Expect = 1e-14
Identities = 38/49 (77%), Positives = 42/49 (85%)
Frame = +1
Query: 1 SRLERPCLHALTLGFMHPLTGDKVSFSRLPPEDFAEVLSRLRAISTEKL 147
SRLERPCLHALTLGF HP TG+ V F++LPP DFAEVLS LR ISTEK+
Sbjct: 404 SRLERPCLHALTLGFRHPKTGENVHFTQLPPTDFAEVLSDLRTISTEKV 452
>XP_010320443.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Solanum lycopersicum]
Length = 431
Score = 80.1 bits (196), Expect = 2e-14
Identities = 34/50 (68%), Positives = 43/50 (86%)
Frame = +1
Query: 1 SRLERPCLHALTLGFMHPLTGDKVSFSRLPPEDFAEVLSRLRAISTEKLI 150
S+++RPCLHALTLGF HP TG+ + F+RLPP DFAE+LS LRAI TEK++
Sbjct: 382 SQIDRPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSELRAIKTEKVL 431
>XP_006342081.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Solanum tuberosum]
Length = 431
Score = 79.7 bits (195), Expect = 3e-14
Identities = 34/50 (68%), Positives = 44/50 (88%)
Frame = +1
Query: 1 SRLERPCLHALTLGFMHPLTGDKVSFSRLPPEDFAEVLSRLRAISTEKLI 150
S+++RPCLHALTLGF HP TG+ + F+RLPP DFAE+LS LRAI+TEK++
Sbjct: 382 SQIDRPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSYLRAINTEKVL 431
>XP_015161913.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Solanum tuberosum]
Length = 460
Score = 79.7 bits (195), Expect = 3e-14
Identities = 34/50 (68%), Positives = 44/50 (88%)
Frame = +1
Query: 1 SRLERPCLHALTLGFMHPLTGDKVSFSRLPPEDFAEVLSRLRAISTEKLI 150
S+++RPCLHALTLGF HP TG+ + F+RLPP DFAE+LS LRAI+TEK++
Sbjct: 411 SQIDRPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSYLRAINTEKVL 460
>XP_010320444.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3
[Solanum lycopersicum]
Length = 430
Score = 79.3 bits (194), Expect = 4e-14
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +1
Query: 1 SRLERPCLHALTLGFMHPLTGDKVSFSRLPPEDFAEVLSRLRAISTEKL 147
S+++RPCLHALTLGF HP TG+ + F+RLPP DFAE+LS LRAI TEK+
Sbjct: 376 SQIDRPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSELRAIKTEKV 424
>XP_004238386.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Solanum lycopersicum]
Length = 436
Score = 79.3 bits (194), Expect = 4e-14
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = +1
Query: 1 SRLERPCLHALTLGFMHPLTGDKVSFSRLPPEDFAEVLSRLRAISTEKL 147
S+++RPCLHALTLGF HP TG+ + F+RLPP DFAE+LS LRAI TEK+
Sbjct: 382 SQIDRPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSELRAIKTEKV 430
>XP_017215057.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Daucus
carota subsp. sativus]
Length = 431
Score = 78.6 bits (192), Expect = 7e-14
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = +1
Query: 1 SRLERPCLHALTLGFMHPLTGDKVSFSRLPPEDFAEVLSRLRAISTEKLINQGE 162
S LERPCLHALTLGFMHP T +V FS LPP DFAEVLS LR+++TEK++N E
Sbjct: 375 SNLERPCLHALTLGFMHPHTRKQVHFSCLPPVDFAEVLSVLRSVNTEKIMNMEE 428
>XP_015073900.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Solanum pennellii]
Length = 431
Score = 77.4 bits (189), Expect = 2e-13
Identities = 33/50 (66%), Positives = 43/50 (86%)
Frame = +1
Query: 1 SRLERPCLHALTLGFMHPLTGDKVSFSRLPPEDFAEVLSRLRAISTEKLI 150
S+++RPCLHALTLGF HP TG+ + +RLPP DFAE+LS LRAI+TEK++
Sbjct: 382 SQIDRPCLHALTLGFRHPFTGENLHITRLPPPDFAEILSELRAINTEKVL 431
>XP_015073899.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Solanum pennellii]
Length = 436
Score = 76.6 bits (187), Expect = 3e-13
Identities = 33/49 (67%), Positives = 42/49 (85%)
Frame = +1
Query: 1 SRLERPCLHALTLGFMHPLTGDKVSFSRLPPEDFAEVLSRLRAISTEKL 147
S+++RPCLHALTLGF HP TG+ + +RLPP DFAE+LS LRAI+TEK+
Sbjct: 382 SQIDRPCLHALTLGFRHPFTGENLHITRLPPPDFAEILSELRAINTEKV 430
>KZM89696.1 hypothetical protein DCAR_022941 [Daucus carota subsp. sativus]
Length = 429
Score = 74.3 bits (181), Expect = 2e-12
Identities = 36/49 (73%), Positives = 41/49 (83%)
Frame = +1
Query: 1 SRLERPCLHALTLGFMHPLTGDKVSFSRLPPEDFAEVLSRLRAISTEKL 147
S LERPCLHALTLGFMHP T +V FS LPP DFAEVLS LR+++TEK+
Sbjct: 371 SNLERPCLHALTLGFMHPHTRKQVHFSCLPPVDFAEVLSVLRSVNTEKV 419