BLASTX nr result

ID: Panax24_contig00008749 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00008749
         (422 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017254674.1 PREDICTED: F-box protein SKIP23-like [Daucus caro...    80   4e-15
KZM89806.1 hypothetical protein DCAR_022831 [Daucus carota subsp...    74   1e-12
XP_019165204.1 PREDICTED: F-box protein SKIP23-like [Ipomoea nil]      67   2e-10
CDP21531.1 unnamed protein product, partial [Coffea canephora]         65   9e-10
XP_017612417.1 PREDICTED: F-box protein SKIP23-like isoform X2 [...    65   2e-09
XP_017612416.1 PREDICTED: F-box protein SKIP23-like isoform X1 [...    65   2e-09
XP_016679526.1 PREDICTED: F-box protein SKIP23-like [Gossypium h...    65   2e-09
XP_012458799.1 PREDICTED: F-box protein SKIP23-like isoform X2 [...    64   2e-09
XP_012458798.1 PREDICTED: F-box protein SKIP23-like isoform X1 [...    64   2e-09
XP_010266938.1 PREDICTED: F-box protein SKIP23-like [Nelumbo nuc...    64   2e-09
XP_016739336.1 PREDICTED: F-box protein SKIP23-like isoform X2 [...    64   4e-09
XP_016739335.1 PREDICTED: F-box protein SKIP23-like isoform X1 [...    64   4e-09
OIT34361.1 f-box protein skip23 [Nicotiana attenuata]                  62   1e-08
XP_019267471.1 PREDICTED: F-box protein SKIP23 isoform X2 [Nicot...    62   1e-08
XP_007041715.2 PREDICTED: F-box protein SKIP23 [Theobroma cacao]       62   1e-08
EOX97546.1 F-box family protein, putative isoform 1 [Theobroma c...    62   1e-08
XP_009609928.1 PREDICTED: F-box protein SKIP23 isoform X2 [Nicot...    62   2e-08
CBI37758.3 unnamed protein product, partial [Vitis vinifera]           57   2e-08
XP_010028793.1 PREDICTED: F-box protein SKIP23 [Eucalyptus grand...    62   2e-08
XP_011088661.1 PREDICTED: F-box protein SKIP23-like [Sesamum ind...    61   3e-08

>XP_017254674.1 PREDICTED: F-box protein SKIP23-like [Daucus carota subsp. sativus]
          Length = 401

 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 35/47 (74%), Positives = 39/47 (82%)
 Frame = -2

Query: 421 IGVFDLESGSIGPLVNYPGFSELFWPPPAWISSPLTMLEVGLNQLSV 281
           I VFDLESGSIGPL +YPG SELFWPPPAWISSP  ++E GLN L +
Sbjct: 355 ISVFDLESGSIGPLADYPGLSELFWPPPAWISSPPNLVEAGLNHLRI 401


>KZM89806.1 hypothetical protein DCAR_022831 [Daucus carota subsp. sativus]
          Length = 410

 Score = 73.6 bits (179), Expect = 1e-12
 Identities = 32/40 (80%), Positives = 35/40 (87%)
 Frame = -2

Query: 421 IGVFDLESGSIGPLVNYPGFSELFWPPPAWISSPLTMLEV 302
           I VFDLESGSIGPL +YPG SELFWPPPAWISSP  ++EV
Sbjct: 355 ISVFDLESGSIGPLADYPGLSELFWPPPAWISSPPNLVEV 394


>XP_019165204.1 PREDICTED: F-box protein SKIP23-like [Ipomoea nil]
          Length = 402

 Score = 67.4 bits (163), Expect = 2e-10
 Identities = 31/47 (65%), Positives = 40/47 (85%)
 Frame = -2

Query: 421 IGVFDLESGSIGPLVNYPGFSELFWPPPAWISSPLTMLEVGLNQLSV 281
           IGV +LESGSIGP+ +Y G+SELFWPPP+WISS  + +E G+NQLS+
Sbjct: 357 IGVSNLESGSIGPINSYIGYSELFWPPPSWISS-ASQIEDGMNQLSI 402


>CDP21531.1 unnamed protein product, partial [Coffea canephora]
          Length = 450

 Score = 65.5 bits (158), Expect = 9e-10
 Identities = 30/47 (63%), Positives = 37/47 (78%)
 Frame = -2

Query: 421 IGVFDLESGSIGPLVNYPGFSELFWPPPAWISSPLTMLEVGLNQLSV 281
           IGVFDLESGSIGP+ +Y G+SE FWPPPAW+  P + +E  L +LSV
Sbjct: 405 IGVFDLESGSIGPITSYQGYSESFWPPPAWVYPP-SAVEDWLEELSV 450


>XP_017612417.1 PREDICTED: F-box protein SKIP23-like isoform X2 [Gossypium
           arboreum]
          Length = 404

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 28/33 (84%), Positives = 29/33 (87%)
 Frame = -2

Query: 421 IGVFDLESGSIGPLVNYPGFSELFWPPPAWISS 323
           IGVFDLESGSIGPL  +P FSELFWPPP WISS
Sbjct: 360 IGVFDLESGSIGPLTKFPQFSELFWPPPHWISS 392


>XP_017612416.1 PREDICTED: F-box protein SKIP23-like isoform X1 [Gossypium
           arboreum]
          Length = 406

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 28/33 (84%), Positives = 29/33 (87%)
 Frame = -2

Query: 421 IGVFDLESGSIGPLVNYPGFSELFWPPPAWISS 323
           IGVFDLESGSIGPL  +P FSELFWPPP WISS
Sbjct: 360 IGVFDLESGSIGPLTKFPQFSELFWPPPHWISS 392


>XP_016679526.1 PREDICTED: F-box protein SKIP23-like [Gossypium hirsutum]
          Length = 406

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = -2

Query: 421 IGVFDLESGSIGPLVNYPGFSELFWPPPAWISS 323
           +GVFDLESGSIGPL  +P FSELFWPPP WISS
Sbjct: 360 VGVFDLESGSIGPLTKFPQFSELFWPPPLWISS 392


>XP_012458799.1 PREDICTED: F-box protein SKIP23-like isoform X2 [Gossypium
           raimondii] KJB77790.1 hypothetical protein
           B456_012G157500 [Gossypium raimondii]
          Length = 404

 Score = 64.3 bits (155), Expect = 2e-09
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = -2

Query: 421 IGVFDLESGSIGPLVNYPGFSELFWPPPAWISS 323
           +GVFDLESGSIGPL  +P FSELFWPPP WISS
Sbjct: 360 VGVFDLESGSIGPLTKFPQFSELFWPPPHWISS 392


>XP_012458798.1 PREDICTED: F-box protein SKIP23-like isoform X1 [Gossypium
           raimondii] KJB77789.1 hypothetical protein
           B456_012G157500 [Gossypium raimondii]
          Length = 406

 Score = 64.3 bits (155), Expect = 2e-09
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = -2

Query: 421 IGVFDLESGSIGPLVNYPGFSELFWPPPAWISS 323
           +GVFDLESGSIGPL  +P FSELFWPPP WISS
Sbjct: 360 VGVFDLESGSIGPLTKFPQFSELFWPPPHWISS 392


>XP_010266938.1 PREDICTED: F-box protein SKIP23-like [Nelumbo nucifera]
          Length = 409

 Score = 64.3 bits (155), Expect = 2e-09
 Identities = 25/36 (69%), Positives = 33/36 (91%)
 Frame = -2

Query: 421 IGVFDLESGSIGPLVNYPGFSELFWPPPAWISSPLT 314
           IGVF+LE GSIGPL +YPG+S+LFWPPP+WI+S ++
Sbjct: 363 IGVFNLEDGSIGPLASYPGYSKLFWPPPSWIASTMS 398


>XP_016739336.1 PREDICTED: F-box protein SKIP23-like isoform X2 [Gossypium
           hirsutum]
          Length = 404

 Score = 63.5 bits (153), Expect = 4e-09
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = -2

Query: 421 IGVFDLESGSIGPLVNYPGFSELFWPPPAWISS 323
           IGVFDLESGSIGPL  +P FS+LFWPPP WISS
Sbjct: 360 IGVFDLESGSIGPLTKFPQFSQLFWPPPHWISS 392


>XP_016739335.1 PREDICTED: F-box protein SKIP23-like isoform X1 [Gossypium
           hirsutum]
          Length = 406

 Score = 63.5 bits (153), Expect = 4e-09
 Identities = 27/33 (81%), Positives = 29/33 (87%)
 Frame = -2

Query: 421 IGVFDLESGSIGPLVNYPGFSELFWPPPAWISS 323
           IGVFDLESGSIGPL  +P FS+LFWPPP WISS
Sbjct: 360 IGVFDLESGSIGPLTKFPQFSQLFWPPPHWISS 392


>OIT34361.1 f-box protein skip23 [Nicotiana attenuata]
          Length = 411

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 26/47 (55%), Positives = 38/47 (80%)
 Frame = -2

Query: 421 IGVFDLESGSIGPLVNYPGFSELFWPPPAWISSPLTMLEVGLNQLSV 281
           IGVF+L++GSIGP+ +Y G++ELFWPPP+WI SP   ++  LN+L +
Sbjct: 366 IGVFNLDNGSIGPISSYNGYAELFWPPPSWICSP-QPIDAELNELKI 411


>XP_019267471.1 PREDICTED: F-box protein SKIP23 isoform X2 [Nicotiana attenuata]
          Length = 453

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 26/47 (55%), Positives = 38/47 (80%)
 Frame = -2

Query: 421 IGVFDLESGSIGPLVNYPGFSELFWPPPAWISSPLTMLEVGLNQLSV 281
           IGVF+L++GSIGP+ +Y G++ELFWPPP+WI SP   ++  LN+L +
Sbjct: 408 IGVFNLDNGSIGPISSYNGYAELFWPPPSWICSP-QPIDAELNELKI 453


>XP_007041715.2 PREDICTED: F-box protein SKIP23 [Theobroma cacao]
          Length = 411

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = -2

Query: 421 IGVFDLESGSIGPLVNYPGFSELFWPPPAWISSPLTMLEVGLN 293
           +GVFDLE+GSIGPL  +P FS+LFWPPP WISS  T L+  +N
Sbjct: 366 VGVFDLENGSIGPLGKFPQFSKLFWPPPRWISS--TTLDAQIN 406


>EOX97546.1 F-box family protein, putative isoform 1 [Theobroma cacao]
          Length = 411

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = -2

Query: 421 IGVFDLESGSIGPLVNYPGFSELFWPPPAWISSPLTMLEVGLN 293
           +GVFDLE+GSIGPL  +P FS+LFWPPP WISS  T L+  +N
Sbjct: 366 VGVFDLENGSIGPLGKFPQFSKLFWPPPRWISS--TTLDAQIN 406


>XP_009609928.1 PREDICTED: F-box protein SKIP23 isoform X2 [Nicotiana
           tomentosiformis]
          Length = 452

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 26/47 (55%), Positives = 37/47 (78%)
 Frame = -2

Query: 421 IGVFDLESGSIGPLVNYPGFSELFWPPPAWISSPLTMLEVGLNQLSV 281
           IGVF L++GSIGP+ +Y G++ELFWPPP+WI SP   ++  LN+L +
Sbjct: 407 IGVFSLDNGSIGPISSYNGYAELFWPPPSWICSP-QPIDAELNELKI 452


>CBI37758.3 unnamed protein product, partial [Vitis vinifera]
          Length = 71

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 23/33 (69%), Positives = 28/33 (84%)
 Frame = -2

Query: 421 IGVFDLESGSIGPLVNYPGFSELFWPPPAWISS 323
           IGVFDL+SGSIGPL +Y  +S+  WPPPAW+SS
Sbjct: 34  IGVFDLDSGSIGPLSSYANYSKTIWPPPAWVSS 66


>XP_010028793.1 PREDICTED: F-box protein SKIP23 [Eucalyptus grandis] KCW55604.1
           hypothetical protein EUGRSUZ_I01474 [Eucalyptus grandis]
          Length = 397

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = -2

Query: 421 IGVFDLESGSIGPLVNYPGFSELFWPPPAWISSPLTMLEVGLNQLSV 281
           IGV+D++SG IGPL +Y G+SELFWPPP WI+S  + ++  L  L+V
Sbjct: 351 IGVYDMDSGKIGPLEDYAGYSELFWPPPDWIASTTSEVQNQLEALAV 397


>XP_011088661.1 PREDICTED: F-box protein SKIP23-like [Sesamum indicum]
          Length = 401

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 26/47 (55%), Positives = 38/47 (80%)
 Frame = -2

Query: 421 IGVFDLESGSIGPLVNYPGFSELFWPPPAWISSPLTMLEVGLNQLSV 281
           +GVFDLESGSIGP+ N+ G+S++FWPPP W+ S  + +E GL +L++
Sbjct: 356 VGVFDLESGSIGPIGNHVGYSKMFWPPPDWVCSTAS-IEDGLYRLNI 401


Top