BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00008530
         (1091 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM91855.1 hypothetical protein DCAR_020780 [Daucus carota subsp...    67   3e-09
XP_017258326.1 PREDICTED: splicing factor U2af small subunit B-l...    67   7e-09
KVH99924.1 Nucleotide-binding, alpha-beta plait [Cynara carduncu...    64   7e-08
XP_002277445.2 PREDICTED: splicing factor U2af small subunit B [...    64   1e-07

>KZM91855.1 hypothetical protein DCAR_020780 [Daucus carota subsp. sativus]
          Length = 252

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 37/71 (52%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
 Frame = -2

Query: 1021 VREGSAERRAKIEQWNREKEQAE----SXXXXXXXXXXXXXXXXXXXXNEEQYYDDPHQQ 854
            VREGSAERRAKIEQWNRE++QAE    S                    N+EQYY +PHQQ
Sbjct: 182  VREGSAERRAKIEQWNRERDQAETGNKSANNYSNDDRNSDGNGNGNAHNKEQYY-EPHQQ 240

Query: 853  QEHLPDDGGYN 821
            ++++PDDGGY+
Sbjct: 241  RQNVPDDGGYS 251


>XP_017258326.1 PREDICTED: splicing factor U2af small subunit B-like [Daucus carota
            subsp. sativus] XP_017258327.1 PREDICTED: splicing factor
            U2af small subunit B-like [Daucus carota subsp. sativus]
            XP_017258328.1 PREDICTED: splicing factor U2af small
            subunit B-like [Daucus carota subsp. sativus]
          Length = 329

 Score = 67.4 bits (163), Expect = 7e-09
 Identities = 37/71 (52%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
 Frame = -2

Query: 1021 VREGSAERRAKIEQWNREKEQAE----SXXXXXXXXXXXXXXXXXXXXNEEQYYDDPHQQ 854
            VREGSAERRAKIEQWNRE++QAE    S                    N+EQYY +PHQQ
Sbjct: 259  VREGSAERRAKIEQWNRERDQAETGNKSANNYSNDDRNSDGNGNGNAHNKEQYY-EPHQQ 317

Query: 853  QEHLPDDGGYN 821
            ++++PDDGGY+
Sbjct: 318  RQNVPDDGGYS 328


>KVH99924.1 Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
            scolymus]
          Length = 327

 Score = 64.3 bits (155), Expect = 7e-08
 Identities = 31/68 (45%), Positives = 40/68 (58%)
 Frame = -2

Query: 1021 VREGSAERRAKIEQWNREKEQAESXXXXXXXXXXXXXXXXXXXXNEEQYYDDPHQQQEHL 842
            VREGSAERRAKIEQWNREKEQ+++                        +Y +PHQ+++  
Sbjct: 260  VREGSAERRAKIEQWNREKEQSKTGPKTASSNENNDGINDDGAPQNGDHYYEPHQEKQPQ 319

Query: 841  PDDGGYNY 818
             DDGGY+Y
Sbjct: 320  QDDGGYDY 327


>XP_002277445.2 PREDICTED: splicing factor U2af small subunit B [Vitis vinifera]
            XP_010654034.1 PREDICTED: splicing factor U2af small
            subunit B [Vitis vinifera]
          Length = 343

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
 Frame = -2

Query: 1021 VREGSAERRAKIEQWNREKEQAESXXXXXXXXXXXXXXXXXXXXNEEQYYDDPHQQ--QE 848
            VREGSAERRAKIEQWNRE+EQAE+                    +++QYY+  HQ+  Q+
Sbjct: 274  VREGSAERRAKIEQWNREREQAEATNKNDNSHSDNGNNNNDFEQDDQQYYNPQHQEEDQQ 333

Query: 847  HLPDDGGYNY 818
                 GGYNY
Sbjct: 334  QQQQHGGYNY 343