BLASTX nr result
ID: Panax24_contig00008500
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00008500
(1118 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN68272.1 hypothetical protein VITISV_029913 [Vitis vinifera] 214 3e-65
XP_015893878.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C... 216 4e-65
OMO85554.1 hypothetical protein CCACVL1_10103 [Corchorus capsula... 214 1e-64
XP_017244716.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C... 215 1e-64
XP_007032034.2 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C... 216 1e-64
EEF49330.1 conserved hypothetical protein [Ricinus communis] 215 2e-64
XP_012067360.1 PREDICTED: uncharacterized protein LOC105630219 [... 215 2e-64
XP_010249255.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C... 214 3e-64
XP_002276522.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C... 214 4e-64
KYP51161.1 hypothetical protein KK1_026969, partial [Cajanus cajan] 213 4e-64
OMO99303.1 hypothetical protein COLO4_13379 [Corchorus olitorius] 214 4e-64
OAY37114.1 hypothetical protein MANES_11G076200 [Manihot esculenta] 214 7e-64
EOY02960.1 Cofactor assembly of complex C isoform 1 [Theobroma c... 213 1e-63
XP_010315530.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C... 212 2e-63
XP_016695144.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C... 211 5e-63
XP_012489468.1 PREDICTED: uncharacterized protein LOC105802407 [... 211 5e-63
XP_016557929.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C... 210 1e-62
XP_015066920.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C... 209 2e-62
XP_006350373.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C... 209 2e-62
XP_003624513.1 cofactor assembly of complex protein C, putative ... 209 2e-62
>CAN68272.1 hypothetical protein VITISV_029913 [Vitis vinifera]
Length = 190
Score = 214 bits (545), Expect = 3e-65
Identities = 108/130 (83%), Positives = 112/130 (86%)
Frame = +1
Query: 1 LSFFTRNNFVVLDKGETITFEGVMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 180
LSFF+RNNFVV D+GETITFEG+MVPSRGQAALLTFCTCISLASV LVLTIT PDVGNNW
Sbjct: 61 LSFFSRNNFVVSDRGETITFEGMMVPSRGQAALLTFCTCISLASVGLVLTITFPDVGNNW 120
Query: 181 FWLTILSPLAGVYYWKRASRTELIKVKMIVAEDGTLSEXXXXXXXXXXXXMRKELQLSEK 360
FWLTILSPLAG YYWKRASR E IKVKMIVA+DGTLSE MRKELQLSEK
Sbjct: 121 FWLTILSPLAGAYYWKRASRKEQIKVKMIVADDGTLSEIIVQGDDQQVEQMRKELQLSEK 180
Query: 361 GMVYVKGIFE 390
GMVYVKGIFE
Sbjct: 181 GMVYVKGIFE 190
>XP_015893878.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1,
chloroplastic [Ziziphus jujuba]
Length = 260
Score = 216 bits (551), Expect = 4e-65
Identities = 109/131 (83%), Positives = 112/131 (85%)
Frame = +1
Query: 1 LSFFTRNNFVVLDKGETITFEGVMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 180
LSFFTRNNF V D+GETITFEG+MVPSRGQAALLTFCTCISLASVALVLTI VPD GNNW
Sbjct: 130 LSFFTRNNFAVTDRGETITFEGMMVPSRGQAALLTFCTCISLASVALVLTIAVPDFGNNW 189
Query: 181 FWLTILSPLAGVYYWKRASRTELIKVKMIVAEDGTLSEXXXXXXXXXXXXMRKELQLSEK 360
FWLTILSPLAG YYWKRASR E IKVKMIVAEDGTLSE MRKELQLSEK
Sbjct: 190 FWLTILSPLAGAYYWKRASRKEQIKVKMIVAEDGTLSEIVVQGDDQQVEQMRKELQLSEK 249
Query: 361 GMVYVKGIFER 393
GMVYVKG+FER
Sbjct: 250 GMVYVKGLFER 260
>OMO85554.1 hypothetical protein CCACVL1_10103 [Corchorus capsularis]
Length = 224
Score = 214 bits (545), Expect = 1e-64
Identities = 107/131 (81%), Positives = 112/131 (85%)
Frame = +1
Query: 1 LSFFTRNNFVVLDKGETITFEGVMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 180
LSFFTRNNF V D+GETITFEG+M PSRGQAALLTFCTCISLASVALVLTIT+PDVGNNW
Sbjct: 94 LSFFTRNNFTVTDRGETITFEGMMTPSRGQAALLTFCTCISLASVALVLTITLPDVGNNW 153
Query: 181 FWLTILSPLAGVYYWKRASRTELIKVKMIVAEDGTLSEXXXXXXXXXXXXMRKELQLSEK 360
FWLT LSPLAG YYWKRASR E IKVKM+VAEDGTLSE MRKEL+LSEK
Sbjct: 154 FWLTALSPLAGAYYWKRASRKEQIKVKMLVAEDGTLSEIVVQGDDQQVDEMRKELKLSEK 213
Query: 361 GMVYVKGIFER 393
GMVYVKGIFER
Sbjct: 214 GMVYVKGIFER 224
>XP_017244716.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1,
chloroplastic [Daucus carota subsp. sativus] KZM98172.1
hypothetical protein DCAR_014466 [Daucus carota subsp.
sativus]
Length = 259
Score = 215 bits (548), Expect = 1e-64
Identities = 108/131 (82%), Positives = 113/131 (86%)
Frame = +1
Query: 1 LSFFTRNNFVVLDKGETITFEGVMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 180
LSFFTRN+F VLDKGETITFEG+M PSRGQAALLTFCTCISL SVALVLTIT P+VGNNW
Sbjct: 128 LSFFTRNSFAVLDKGETITFEGMMAPSRGQAALLTFCTCISLGSVALVLTITNPEVGNNW 187
Query: 181 FWLTILSPLAGVYYWKRASRTELIKVKMIVAEDGTLSEXXXXXXXXXXXXMRKELQLSEK 360
FWLTILSPLAG YYWKRASRTE IKVKMI+AEDGTLSE MRKELQLSEK
Sbjct: 188 FWLTILSPLAGAYYWKRASRTEQIKVKMILAEDGTLSEIVVQGDDQQVEQMRKELQLSEK 247
Query: 361 GMVYVKGIFER 393
GMVYVKG+FER
Sbjct: 248 GMVYVKGLFER 258
>XP_007032034.2 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1,
chloroplastic [Theobroma cacao]
Length = 275
Score = 216 bits (549), Expect = 1e-64
Identities = 107/131 (81%), Positives = 114/131 (87%)
Frame = +1
Query: 1 LSFFTRNNFVVLDKGETITFEGVMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 180
LSFFTRNNFVV D+GETITFEG+MVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW
Sbjct: 145 LSFFTRNNFVVTDRGETITFEGMMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 204
Query: 181 FWLTILSPLAGVYYWKRASRTELIKVKMIVAEDGTLSEXXXXXXXXXXXXMRKELQLSEK 360
FW+T+LSPLAG YYWKRASR E IKVK++VA DGTLSE MRKEL+LSEK
Sbjct: 205 FWITVLSPLAGAYYWKRASRKEQIKVKVLVANDGTLSEIVVQGDDQQVDQMRKELKLSEK 264
Query: 361 GMVYVKGIFER 393
GMVYVKGIFER
Sbjct: 265 GMVYVKGIFER 275
>EEF49330.1 conserved hypothetical protein [Ricinus communis]
Length = 266
Score = 215 bits (547), Expect = 2e-64
Identities = 106/131 (80%), Positives = 114/131 (87%)
Frame = +1
Query: 1 LSFFTRNNFVVLDKGETITFEGVMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 180
LSFFTRNNFVV D+GETITFEG+M+PSRGQAALLTFCTCISLASVALVLTIT+PD GNNW
Sbjct: 136 LSFFTRNNFVVTDRGETITFEGMMIPSRGQAALLTFCTCISLASVALVLTITLPDFGNNW 195
Query: 181 FWLTILSPLAGVYYWKRASRTELIKVKMIVAEDGTLSEXXXXXXXXXXXXMRKELQLSEK 360
FW+TILSPLAG YYWKRASR E IKVKM+V++DGTLSE MRKELQLSEK
Sbjct: 196 FWITILSPLAGAYYWKRASRKEQIKVKMMVSDDGTLSEIVVQGDDQQVEQMRKELQLSEK 255
Query: 361 GMVYVKGIFER 393
GMVYVKGIFER
Sbjct: 256 GMVYVKGIFER 266
>XP_012067360.1 PREDICTED: uncharacterized protein LOC105630219 [Jatropha curcas]
KDP41863.1 hypothetical protein JCGZ_26881 [Jatropha
curcas]
Length = 274
Score = 215 bits (547), Expect = 2e-64
Identities = 108/131 (82%), Positives = 112/131 (85%)
Frame = +1
Query: 1 LSFFTRNNFVVLDKGETITFEGVMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 180
LSFFTRNNF V D+GETITFEG+MVPSRGQAALLTFCTCISLASVALVLTIT PD GNNW
Sbjct: 144 LSFFTRNNFAVADRGETITFEGMMVPSRGQAALLTFCTCISLASVALVLTITFPDFGNNW 203
Query: 181 FWLTILSPLAGVYYWKRASRTELIKVKMIVAEDGTLSEXXXXXXXXXXXXMRKELQLSEK 360
FW+TILSPLAG YYWK+ASR E IKVKMIVAEDGTLSE MRKELQLSEK
Sbjct: 204 FWITILSPLAGAYYWKQASRKEQIKVKMIVAEDGTLSEIIVQGDDQQVEEMRKELQLSEK 263
Query: 361 GMVYVKGIFER 393
GMVYVKGIFER
Sbjct: 264 GMVYVKGIFER 274
>XP_010249255.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1,
chloroplastic [Nelumbo nucifera]
Length = 267
Score = 214 bits (546), Expect = 3e-64
Identities = 108/131 (82%), Positives = 114/131 (87%)
Frame = +1
Query: 1 LSFFTRNNFVVLDKGETITFEGVMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 180
LSFFTRNNF V D+GETITFEG+MVPSRGQAALLTFCTCISLASVALVLTITVPDVG+NW
Sbjct: 137 LSFFTRNNFTVSDRGETITFEGMMVPSRGQAALLTFCTCISLASVALVLTITVPDVGDNW 196
Query: 181 FWLTILSPLAGVYYWKRASRTELIKVKMIVAEDGTLSEXXXXXXXXXXXXMRKELQLSEK 360
+WLTILSPLAGVYYW RASR E IKVKMIVA+DGTLSE MRKELQL+EK
Sbjct: 197 YWLTILSPLAGVYYWTRASRKEQIKVKMIVADDGTLSEIIVQGDDQQIEQMRKELQLNEK 256
Query: 361 GMVYVKGIFER 393
GMVYVKGIFER
Sbjct: 257 GMVYVKGIFER 267
>XP_002276522.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1,
chloroplastic [Vitis vinifera] CBI21268.3 unnamed
protein product, partial [Vitis vinifera]
Length = 267
Score = 214 bits (545), Expect = 4e-64
Identities = 108/130 (83%), Positives = 112/130 (86%)
Frame = +1
Query: 1 LSFFTRNNFVVLDKGETITFEGVMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 180
LSFF+RNNFVV D+GETITFEG+MVPSRGQAALLTFCTCISLASV LVLTIT PDVGNNW
Sbjct: 138 LSFFSRNNFVVSDRGETITFEGMMVPSRGQAALLTFCTCISLASVGLVLTITFPDVGNNW 197
Query: 181 FWLTILSPLAGVYYWKRASRTELIKVKMIVAEDGTLSEXXXXXXXXXXXXMRKELQLSEK 360
FWLTILSPLAG YYWKRASR E IKVKMIVA+DGTLSE MRKELQLSEK
Sbjct: 198 FWLTILSPLAGAYYWKRASRKEQIKVKMIVADDGTLSEIIVQGDDQQVEQMRKELQLSEK 257
Query: 361 GMVYVKGIFE 390
GMVYVKGIFE
Sbjct: 258 GMVYVKGIFE 267
>KYP51161.1 hypothetical protein KK1_026969, partial [Cajanus cajan]
Length = 228
Score = 213 bits (541), Expect = 4e-64
Identities = 105/131 (80%), Positives = 113/131 (86%)
Frame = +1
Query: 1 LSFFTRNNFVVLDKGETITFEGVMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 180
LSFFTRNNF V D+GETITFEG+MVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW
Sbjct: 98 LSFFTRNNFAVTDRGETITFEGMMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 157
Query: 181 FWLTILSPLAGVYYWKRASRTELIKVKMIVAEDGTLSEXXXXXXXXXXXXMRKELQLSEK 360
FW+TILSPLAGVYYW RASR E IKVKMIVA+DGTL+E MRK+L+ SEK
Sbjct: 158 FWITILSPLAGVYYWTRASRKEQIKVKMIVADDGTLTEIIVQGDDQQVEQMRKDLKFSEK 217
Query: 361 GMVYVKGIFER 393
GMVYVKG+FER
Sbjct: 218 GMVYVKGVFER 228
>OMO99303.1 hypothetical protein COLO4_13379 [Corchorus olitorius]
Length = 273
Score = 214 bits (545), Expect = 4e-64
Identities = 107/131 (81%), Positives = 112/131 (85%)
Frame = +1
Query: 1 LSFFTRNNFVVLDKGETITFEGVMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 180
LSFFTRNNF V D+GETITFEG+M PSRGQAALLTFCTCISLASVALVLTIT+PDVGNNW
Sbjct: 143 LSFFTRNNFAVTDRGETITFEGMMTPSRGQAALLTFCTCISLASVALVLTITLPDVGNNW 202
Query: 181 FWLTILSPLAGVYYWKRASRTELIKVKMIVAEDGTLSEXXXXXXXXXXXXMRKELQLSEK 360
FWLT LSPLAG YYWKRASR E IKVKM+VAEDGTLSE MRKEL+LSEK
Sbjct: 203 FWLTALSPLAGAYYWKRASRKEQIKVKMLVAEDGTLSEIVVQGDDQQVDEMRKELKLSEK 262
Query: 361 GMVYVKGIFER 393
GMVYVKGIFER
Sbjct: 263 GMVYVKGIFER 273
>OAY37114.1 hypothetical protein MANES_11G076200 [Manihot esculenta]
Length = 278
Score = 214 bits (544), Expect = 7e-64
Identities = 106/131 (80%), Positives = 113/131 (86%)
Frame = +1
Query: 1 LSFFTRNNFVVLDKGETITFEGVMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 180
LSFFTRNNFVV D+GETITFEG+MVPSRGQAALLTFCTCISLASVALVLTIT PD GNNW
Sbjct: 148 LSFFTRNNFVVTDRGETITFEGMMVPSRGQAALLTFCTCISLASVALVLTITFPDFGNNW 207
Query: 181 FWLTILSPLAGVYYWKRASRTELIKVKMIVAEDGTLSEXXXXXXXXXXXXMRKELQLSEK 360
FW+TILSPLAG YYWKRASR E IKVKM+VA+DGTL+E MRKELQLSEK
Sbjct: 208 FWITILSPLAGAYYWKRASRKEQIKVKMMVADDGTLTEIVVQGDDQQVDQMRKELQLSEK 267
Query: 361 GMVYVKGIFER 393
GMVYVKG+FER
Sbjct: 268 GMVYVKGLFER 278
>EOY02960.1 Cofactor assembly of complex C isoform 1 [Theobroma cacao]
Length = 275
Score = 213 bits (543), Expect = 1e-63
Identities = 106/131 (80%), Positives = 113/131 (86%)
Frame = +1
Query: 1 LSFFTRNNFVVLDKGETITFEGVMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 180
LSFFTRNNFVV D+GETITFEG+MVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW
Sbjct: 145 LSFFTRNNFVVTDRGETITFEGMMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 204
Query: 181 FWLTILSPLAGVYYWKRASRTELIKVKMIVAEDGTLSEXXXXXXXXXXXXMRKELQLSEK 360
FW+T+LSP AG YYWKRASR E IKVK++VA DGTLSE MRKEL+LSEK
Sbjct: 205 FWITVLSPSAGAYYWKRASRKEQIKVKVLVANDGTLSEIVVQGDDQQVDQMRKELKLSEK 264
Query: 361 GMVYVKGIFER 393
GMVYVKGIFER
Sbjct: 265 GMVYVKGIFER 275
>XP_010315530.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1,
chloroplastic [Solanum lycopersicum]
Length = 258
Score = 212 bits (539), Expect = 2e-63
Identities = 105/131 (80%), Positives = 112/131 (85%)
Frame = +1
Query: 1 LSFFTRNNFVVLDKGETITFEGVMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 180
LSFFTRNNF VLD+GETITFEG+MVPSRGQAALLTFCTC+SL SVALVLTITVPDVGNNW
Sbjct: 128 LSFFTRNNFAVLDRGETITFEGMMVPSRGQAALLTFCTCVSLGSVALVLTITVPDVGNNW 187
Query: 181 FWLTILSPLAGVYYWKRASRTELIKVKMIVAEDGTLSEXXXXXXXXXXXXMRKELQLSEK 360
FW+T LSPLAGVYYW RASR E IKVKMIVA+DG+LSE MRKELQLSEK
Sbjct: 188 FWITALSPLAGVYYWTRASRKEQIKVKMIVADDGSLSEIVVQGDDQEVEKMRKELQLSEK 247
Query: 361 GMVYVKGIFER 393
GMVYVKG+ ER
Sbjct: 248 GMVYVKGLLER 258
>XP_016695144.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1,
chloroplastic-like [Gossypium hirsutum]
Length = 271
Score = 211 bits (538), Expect = 5e-63
Identities = 103/131 (78%), Positives = 113/131 (86%)
Frame = +1
Query: 1 LSFFTRNNFVVLDKGETITFEGVMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 180
LSFFTRNNFVV D+GETITFEG+MVPSRGQAALLTFCTCISLASVALVLTIT PDVGNNW
Sbjct: 141 LSFFTRNNFVVTDRGETITFEGMMVPSRGQAALLTFCTCISLASVALVLTITFPDVGNNW 200
Query: 181 FWLTILSPLAGVYYWKRASRTELIKVKMIVAEDGTLSEXXXXXXXXXXXXMRKELQLSEK 360
FW+T+LSPLAG YYWKRASR E IKVKM+V +DGT++E MRKEL+LSEK
Sbjct: 201 FWITVLSPLAGAYYWKRASRKEQIKVKMLVTDDGTVNEIVVQGDDQQVDQMRKELKLSEK 260
Query: 361 GMVYVKGIFER 393
GMVYVKG+FER
Sbjct: 261 GMVYVKGLFER 271
>XP_012489468.1 PREDICTED: uncharacterized protein LOC105802407 [Gossypium
raimondii] KJB40654.1 hypothetical protein
B456_007G072900 [Gossypium raimondii]
Length = 271
Score = 211 bits (538), Expect = 5e-63
Identities = 103/131 (78%), Positives = 113/131 (86%)
Frame = +1
Query: 1 LSFFTRNNFVVLDKGETITFEGVMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 180
LSFFTRNNFVV D+GETITFEG+MVPSRGQAALLTFCTCISLASVALVLTIT PDVGNNW
Sbjct: 141 LSFFTRNNFVVTDRGETITFEGMMVPSRGQAALLTFCTCISLASVALVLTITFPDVGNNW 200
Query: 181 FWLTILSPLAGVYYWKRASRTELIKVKMIVAEDGTLSEXXXXXXXXXXXXMRKELQLSEK 360
FW+T+LSPLAG YYWKRASR E IKVKM+V +DGT++E MRKEL+LSEK
Sbjct: 201 FWITVLSPLAGAYYWKRASRKEQIKVKMLVTDDGTVNEIVVQGDDQQVDQMRKELKLSEK 260
Query: 361 GMVYVKGIFER 393
GMVYVKG+FER
Sbjct: 261 GMVYVKGLFER 271
>XP_016557929.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1,
chloroplastic [Capsicum annuum]
Length = 259
Score = 210 bits (534), Expect = 1e-62
Identities = 104/131 (79%), Positives = 111/131 (84%)
Frame = +1
Query: 1 LSFFTRNNFVVLDKGETITFEGVMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 180
LSFFTRNNF VLD+GETITFEG+MVPSRGQAALLTFCTCISL S+ALVLTITVPDVGNNW
Sbjct: 129 LSFFTRNNFAVLDRGETITFEGMMVPSRGQAALLTFCTCISLGSIALVLTITVPDVGNNW 188
Query: 181 FWLTILSPLAGVYYWKRASRTELIKVKMIVAEDGTLSEXXXXXXXXXXXXMRKELQLSEK 360
FW+T LSPLAGVYYW RASR E IKVKM+VA DG+LSE MRKELQLSEK
Sbjct: 189 FWITALSPLAGVYYWTRASRKEQIKVKMMVANDGSLSEIVVQGDDQEVEKMRKELQLSEK 248
Query: 361 GMVYVKGIFER 393
GMVYVKG+ ER
Sbjct: 249 GMVYVKGLLER 259
>XP_015066920.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1,
chloroplastic [Solanum pennellii]
Length = 258
Score = 209 bits (533), Expect = 2e-62
Identities = 104/131 (79%), Positives = 111/131 (84%)
Frame = +1
Query: 1 LSFFTRNNFVVLDKGETITFEGVMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 180
LSFFTRNNF VLD+GETITFEG+MVPSRGQAALLTFCTC+SL SVALVLTITVPDVGNNW
Sbjct: 128 LSFFTRNNFAVLDRGETITFEGMMVPSRGQAALLTFCTCVSLGSVALVLTITVPDVGNNW 187
Query: 181 FWLTILSPLAGVYYWKRASRTELIKVKMIVAEDGTLSEXXXXXXXXXXXXMRKELQLSEK 360
FW+ LSPLAGVYYW RASR E IKVKMIVA+DG+LSE MRKELQLSEK
Sbjct: 188 FWIIALSPLAGVYYWTRASRKEQIKVKMIVADDGSLSEIVVQGDDQEVEKMRKELQLSEK 247
Query: 361 GMVYVKGIFER 393
GMVYVKG+ ER
Sbjct: 248 GMVYVKGLLER 258
>XP_006350373.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1,
chloroplastic [Solanum tuberosum]
Length = 259
Score = 209 bits (533), Expect = 2e-62
Identities = 104/131 (79%), Positives = 111/131 (84%)
Frame = +1
Query: 1 LSFFTRNNFVVLDKGETITFEGVMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 180
LSFFTRNNF VLD+GETITFEG+MVPSRGQAALLTFCTC+SL SVALVLTITVPDVGNNW
Sbjct: 129 LSFFTRNNFAVLDRGETITFEGMMVPSRGQAALLTFCTCVSLGSVALVLTITVPDVGNNW 188
Query: 181 FWLTILSPLAGVYYWKRASRTELIKVKMIVAEDGTLSEXXXXXXXXXXXXMRKELQLSEK 360
FW+ LSPLAGVYYW RASR E IKVKMIVA+DG+LSE MRKELQLSEK
Sbjct: 189 FWIIALSPLAGVYYWTRASRKEQIKVKMIVADDGSLSEIVVQGDDQEVEKMRKELQLSEK 248
Query: 361 GMVYVKGIFER 393
GMVYVKG+ ER
Sbjct: 249 GMVYVKGLLER 259
>XP_003624513.1 cofactor assembly of complex protein C, putative [Medicago
truncatula] AES80731.1 cofactor assembly of complex
protein C, putative [Medicago truncatula]
Length = 259
Score = 209 bits (533), Expect = 2e-62
Identities = 103/130 (79%), Positives = 111/130 (85%)
Frame = +1
Query: 1 LSFFTRNNFVVLDKGETITFEGVMVPSRGQAALLTFCTCISLASVALVLTITVPDVGNNW 180
LSFFTRNNF V+D+GETITFEGVMVPSRGQAALLTFCTCISLASV+LVLTITVPD+GNNW
Sbjct: 129 LSFFTRNNFAVVDRGETITFEGVMVPSRGQAALLTFCTCISLASVSLVLTITVPDIGNNW 188
Query: 181 FWLTILSPLAGVYYWKRASRTELIKVKMIVAEDGTLSEXXXXXXXXXXXXMRKELQLSEK 360
FWLTILSPLAG YYW RASR E ++VKMIV EDGTLSE MRKEL+ SEK
Sbjct: 189 FWLTILSPLAGAYYWTRASRKEQVQVKMIVKEDGTLSEIVVQGDDQQVEQMRKELKFSEK 248
Query: 361 GMVYVKGIFE 390
GMVYVKG+FE
Sbjct: 249 GMVYVKGLFE 258
Database: ./nr
Posted date: Mar 21, 2017 10:06 AM
Number of letters in database: 42,171,959,267
Number of sequences in database: 115,041,592
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 115041592
Number of Hits to DB: 605,602,188,395,902
Number of extensions: 673883433
Number of successful extensions: -1342920016
Number of sequences better than 1.0e-05: 135250529
Number of HSP's gapped: -1818474317
Number of HSP's successfully gapped: 180018989
Length of database: 42,171,959,267
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 33 (17.3 bits)