BLASTX nr result
ID: Panax24_contig00008458
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00008458
(681 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_019200580.1 PREDICTED: mediator of RNA polymerase II transcri... 107 2e-25
XP_019196264.1 PREDICTED: mediator of RNA polymerase II transcri... 105 2e-24
CDP19848.1 unnamed protein product [Coffea canephora] 104 3e-24
XP_017244740.1 PREDICTED: mediator of RNA polymerase II transcri... 102 2e-23
XP_008234028.1 PREDICTED: mediator of RNA polymerase II transcri... 100 2e-22
XP_007218430.1 hypothetical protein PRUPE_ppa011632mg [Prunus pe... 97 2e-21
XP_006437035.1 hypothetical protein CICLE_v10032791mg [Citrus cl... 96 4e-21
XP_010676922.1 PREDICTED: mediator of RNA polymerase II transcri... 95 2e-20
XP_007218431.1 hypothetical protein PRUPE_ppa011632mg [Prunus pe... 93 1e-19
XP_008376355.1 PREDICTED: mediator of RNA polymerase II transcri... 91 5e-19
XP_010676923.1 PREDICTED: mediator of RNA polymerase II transcri... 90 1e-18
KVI04511.1 hypothetical protein Ccrd_017171 [Cynara cardunculus ... 91 2e-18
KNA19186.1 hypothetical protein SOVF_063710 [Spinacia oleracea] 89 4e-18
XP_015877717.1 PREDICTED: mediator of RNA polymerase II transcri... 89 4e-18
XP_015877715.1 PREDICTED: mediator of RNA polymerase II transcri... 89 6e-18
KNA13364.1 hypothetical protein SOVF_117610 [Spinacia oleracea] 87 1e-17
XP_011003574.1 PREDICTED: mediator of RNA polymerase II transcri... 89 1e-17
XP_009363740.1 PREDICTED: mediator of RNA polymerase II transcri... 86 3e-17
XP_008376354.1 PREDICTED: mediator of RNA polymerase II transcri... 86 3e-17
XP_011040328.1 PREDICTED: mediator of RNA polymerase II transcri... 86 6e-17
>XP_019200580.1 PREDICTED: mediator of RNA polymerase II transcription subunit
31-like [Ipomoea nil]
Length = 198
Score = 107 bits (267), Expect = 2e-25
Identities = 56/102 (54%), Positives = 61/102 (59%)
Frame = -3
Query: 595 ELAHRQQFYFWKNYRNNRLKHILPRPLXXXXXXXXXXXXXXXXXXXXPLMANXXXXXXXX 416
ELAHRQQFYFWKNYRNNRLKHILPRPL +
Sbjct: 112 ELAHRQQFYFWKNYRNNRLKHILPRPLPEPESAPP---------------TSAPPIPLPP 156
Query: 415 XXXXXAGSLPSPMQYAIPSGSALAKNDPRNSAVDRRKRKKDG 290
G +PSPMQYAIP+GS++AKNDPRN A DRRKRKKDG
Sbjct: 157 TAATATGPVPSPMQYAIPTGSSIAKNDPRNPAADRRKRKKDG 198
>XP_019196264.1 PREDICTED: mediator of RNA polymerase II transcription subunit
31-like [Ipomoea nil]
Length = 197
Score = 105 bits (261), Expect = 2e-24
Identities = 56/102 (54%), Positives = 60/102 (58%)
Frame = -3
Query: 595 ELAHRQQFYFWKNYRNNRLKHILPRPLXXXXXXXXXXXXXXXXXXXXPLMANXXXXXXXX 416
ELAHRQQFYFWKNYRNNRLKHILPRPL
Sbjct: 112 ELAHRQQFYFWKNYRNNRLKHILPRPLPEPASAPP----------------TSAPPVPLP 155
Query: 415 XXXXXAGSLPSPMQYAIPSGSALAKNDPRNSAVDRRKRKKDG 290
AG +PSPMQYAIP+GS++AKNDPRN DRRKRKKDG
Sbjct: 156 PTGAAAGPVPSPMQYAIPTGSSIAKNDPRNPGADRRKRKKDG 197
>CDP19848.1 unnamed protein product [Coffea canephora]
Length = 206
Score = 104 bits (260), Expect = 3e-24
Identities = 58/102 (56%), Positives = 60/102 (58%)
Frame = -3
Query: 595 ELAHRQQFYFWKNYRNNRLKHILPRPLXXXXXXXXXXXXXXXXXXXXPLMANXXXXXXXX 416
ELAHRQQFYFWKNYRNNRLKHILPRPL ++
Sbjct: 109 ELAHRQQFYFWKNYRNNRLKHILPRPLPEPSAAPSIPTPVPPPPGPPTTLS----APSPG 164
Query: 415 XXXXXAGSLPSPMQYAIPSGSALAKNDPRNSAVDRRKRKKDG 290
A S SPMQYAIPSGSA KNDPRNS VDRRKRKKDG
Sbjct: 165 PVPSPAASALSPMQYAIPSGSAFPKNDPRNSGVDRRKRKKDG 206
>XP_017244740.1 PREDICTED: mediator of RNA polymerase II transcription subunit 31
[Daucus carota subsp. sativus] KZM97991.1 hypothetical
protein DCAR_014647 [Daucus carota subsp. sativus]
Length = 202
Score = 102 bits (254), Expect = 2e-23
Identities = 56/99 (56%), Positives = 59/99 (59%)
Frame = -3
Query: 595 ELAHRQQFYFWKNYRNNRLKHILPRPLXXXXXXXXXXXXXXXXXXXXPLMANXXXXXXXX 416
ELAHRQQFYFWKNYRNNRLKHILPRPL
Sbjct: 108 ELAHRQQFYFWKNYRNNRLKHILPRPLPESVATPQAAAPPPAPATSRA----STIASSTP 163
Query: 415 XXXXXAGSLPSPMQYAIPSGSALAKNDPRNSAVDRRKRK 299
AGS+PSPM YAIPSGS+LAKNDPRNS VDRRK+K
Sbjct: 164 IPTSAAGSIPSPMPYAIPSGSSLAKNDPRNSGVDRRKKK 202
>XP_008234028.1 PREDICTED: mediator of RNA polymerase II transcription subunit 31
[Prunus mume] XP_008234029.1 PREDICTED: mediator of RNA
polymerase II transcription subunit 31 [Prunus mume]
XP_008234030.1 PREDICTED: mediator of RNA polymerase II
transcription subunit 31 [Prunus mume]
Length = 200
Score = 100 bits (248), Expect = 2e-22
Identities = 55/102 (53%), Positives = 58/102 (56%)
Frame = -3
Query: 595 ELAHRQQFYFWKNYRNNRLKHILPRPLXXXXXXXXXXXXXXXXXXXXPLMANXXXXXXXX 416
ELAHRQQFYFWKNYRNNRLKHILPRPL P
Sbjct: 108 ELAHRQQFYFWKNYRNNRLKHILPRPLPEPVAAPPTPAPPQQPVPPVPATT--------- 158
Query: 415 XXXXXAGSLPSPMQYAIPSGSALAKNDPRNSAVDRRKRKKDG 290
PSPMQYA+P GSALAKN+ RNS VDRRKRKK+G
Sbjct: 159 VSVTANAPAPSPMQYAVPPGSALAKNEARNSGVDRRKRKKEG 200
>XP_007218430.1 hypothetical protein PRUPE_ppa011632mg [Prunus persica] ONI24931.1
hypothetical protein PRUPE_2G269700 [Prunus persica]
ONI24932.1 hypothetical protein PRUPE_2G269700 [Prunus
persica] ONI24933.1 hypothetical protein PRUPE_2G269700
[Prunus persica]
Length = 200
Score = 97.1 bits (240), Expect = 2e-21
Identities = 54/102 (52%), Positives = 56/102 (54%)
Frame = -3
Query: 595 ELAHRQQFYFWKNYRNNRLKHILPRPLXXXXXXXXXXXXXXXXXXXXPLMANXXXXXXXX 416
ELAHRQQFYFWKNYRNNRLKHILPRPL P
Sbjct: 108 ELAHRQQFYFWKNYRNNRLKHILPRPLPEPVAAPPTPAPPQQPVPPVPATT--------- 158
Query: 415 XXXXXAGSLPSPMQYAIPSGSALAKNDPRNSAVDRRKRKKDG 290
PSPMQY P GSALAKN+ RNS VDRRKRKK+G
Sbjct: 159 VSVTANAPAPSPMQYVAPPGSALAKNEARNSGVDRRKRKKEG 200
>XP_006437035.1 hypothetical protein CICLE_v10032791mg [Citrus clementina]
XP_006437036.1 hypothetical protein CICLE_v10032791mg
[Citrus clementina] XP_006485032.1 PREDICTED: mediator
of RNA polymerase II transcription subunit 31 [Citrus
sinensis] ESR50275.1 hypothetical protein
CICLE_v10032791mg [Citrus clementina] ESR50276.1
hypothetical protein CICLE_v10032791mg [Citrus
clementina]
Length = 199
Score = 96.3 bits (238), Expect = 4e-21
Identities = 53/102 (51%), Positives = 57/102 (55%)
Frame = -3
Query: 595 ELAHRQQFYFWKNYRNNRLKHILPRPLXXXXXXXXXXXXXXXXXXXXPLMANXXXXXXXX 416
ELAHRQQF+FWKNYRNNRLKHILPRPL L
Sbjct: 108 ELAHRQQFFFWKNYRNNRLKHILPRPLPEPSEAPPPAAAPPLPPAPPVL----------T 157
Query: 415 XXXXXAGSLPSPMQYAIPSGSALAKNDPRNSAVDRRKRKKDG 290
G SPMQY IP GSAL KND R+S++DRRKRKKDG
Sbjct: 158 PVTAAPGPALSPMQYGIPPGSALMKNDMRSSSIDRRKRKKDG 199
>XP_010676922.1 PREDICTED: mediator of RNA polymerase II transcription subunit 31
isoform X1 [Beta vulgaris subsp. vulgaris] KMT12492.1
hypothetical protein BVRB_5g104190 [Beta vulgaris subsp.
vulgaris]
Length = 197
Score = 94.7 bits (234), Expect = 2e-20
Identities = 53/102 (51%), Positives = 56/102 (54%)
Frame = -3
Query: 595 ELAHRQQFYFWKNYRNNRLKHILPRPLXXXXXXXXXXXXXXXXXXXXPLMANXXXXXXXX 416
ELAHRQQFYFWKNYRNNRLKHILPRPL A
Sbjct: 108 ELAHRQQFYFWKNYRNNRLKHILPRPLPEPDPAPPAS------------TAAPPPLPPAI 155
Query: 415 XXXXXAGSLPSPMQYAIPSGSALAKNDPRNSAVDRRKRKKDG 290
+ SPMQYAIP GS +AKND RNS DRRKRKK+G
Sbjct: 156 PATSASSPALSPMQYAIPPGSGVAKNDMRNSGTDRRKRKKEG 197
>XP_007218431.1 hypothetical protein PRUPE_ppa011632mg [Prunus persica] ONI24930.1
hypothetical protein PRUPE_2G269700 [Prunus persica]
Length = 202
Score = 92.8 bits (229), Expect = 1e-19
Identities = 52/100 (52%), Positives = 54/100 (54%)
Frame = -3
Query: 595 ELAHRQQFYFWKNYRNNRLKHILPRPLXXXXXXXXXXXXXXXXXXXXPLMANXXXXXXXX 416
ELAHRQQFYFWKNYRNNRLKHILPRPL P
Sbjct: 108 ELAHRQQFYFWKNYRNNRLKHILPRPLPEPVAAPPTPAPPQQPVPPVPATT--------- 158
Query: 415 XXXXXAGSLPSPMQYAIPSGSALAKNDPRNSAVDRRKRKK 296
PSPMQY P GSALAKN+ RNS VDRRKRK+
Sbjct: 159 VSVTANAPAPSPMQYVAPPGSALAKNEARNSGVDRRKRKR 198
>XP_008376355.1 PREDICTED: mediator of RNA polymerase II transcription subunit 31
isoform X2 [Malus domestica] XP_008357018.1 PREDICTED:
mediator of RNA polymerase II transcription subunit
31-like isoform X2 [Malus domestica] XP_008364856.1
PREDICTED: mediator of RNA polymerase II transcription
subunit 31-like isoform X2 [Malus domestica]
XP_009363741.1 PREDICTED: mediator of RNA polymerase II
transcription subunit 31 isoform X2 [Pyrus x
bretschneideri]
Length = 202
Score = 90.9 bits (224), Expect = 5e-19
Identities = 51/102 (50%), Positives = 57/102 (55%)
Frame = -3
Query: 595 ELAHRQQFYFWKNYRNNRLKHILPRPLXXXXXXXXXXXXXXXXXXXXPLMANXXXXXXXX 416
ELAHRQQFYFWKNYRNNRLKHILPRPL ++
Sbjct: 108 ELAHRQQFYFWKNYRNNRLKHILPRPL------PEPVPALPPPAPPQQVVPPVPPVPATT 161
Query: 415 XXXXXAGSLPSPMQYAIPSGSALAKNDPRNSAVDRRKRKKDG 290
PSPMQY++P GSA K +PRN+ VDRRKRKKDG
Sbjct: 162 VSVTATAPAPSPMQYSMPPGSA-PKVEPRNTGVDRRKRKKDG 202
>XP_010676923.1 PREDICTED: mediator of RNA polymerase II transcription subunit 31
isoform X2 [Beta vulgaris subsp. vulgaris]
Length = 194
Score = 89.7 bits (221), Expect = 1e-18
Identities = 51/99 (51%), Positives = 53/99 (53%)
Frame = -3
Query: 595 ELAHRQQFYFWKNYRNNRLKHILPRPLXXXXXXXXXXXXXXXXXXXXPLMANXXXXXXXX 416
ELAHRQQFYFWKNYRNNRLKHILPRPL A
Sbjct: 108 ELAHRQQFYFWKNYRNNRLKHILPRPLPEPDPAPPAS------------TAAPPPLPPAI 155
Query: 415 XXXXXAGSLPSPMQYAIPSGSALAKNDPRNSAVDRRKRK 299
+ SPMQYAIP GS +AKND RNS DRRKRK
Sbjct: 156 PATSASSPALSPMQYAIPPGSGVAKNDMRNSGTDRRKRK 194
>KVI04511.1 hypothetical protein Ccrd_017171 [Cynara cardunculus var. scolymus]
Length = 291
Score = 91.3 bits (225), Expect = 2e-18
Identities = 53/105 (50%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Frame = -3
Query: 595 ELAHRQQFYFWKNYRNNRLKHILPRPLXXXXXXXXXXXXXXXXXXXXPLMANXXXXXXXX 416
EL HRQQFY+WKNYRNNRLKH+LPRPL L
Sbjct: 198 ELTHRQQFYYWKNYRNNRLKHMLPRPL----------PETTAAPPSNALPPPIPPSTSTI 247
Query: 415 XXXXXAGSLP---SPMQYAIPSGSALAKNDPRNSAVDRRKRKKDG 290
GS P SPMQY +PSG LAKNDPR S +DRRKRKKDG
Sbjct: 248 TAASAPGSAPPVHSPMQYGVPSGPPLAKNDPR-SGIDRRKRKKDG 291
>KNA19186.1 hypothetical protein SOVF_063710 [Spinacia oleracea]
Length = 197
Score = 88.6 bits (218), Expect = 4e-18
Identities = 50/102 (49%), Positives = 53/102 (51%)
Frame = -3
Query: 595 ELAHRQQFYFWKNYRNNRLKHILPRPLXXXXXXXXXXXXXXXXXXXXPLMANXXXXXXXX 416
ELAHRQQFYFWKNYRNNRLKHILPRPL A
Sbjct: 108 ELAHRQQFYFWKNYRNNRLKHILPRPLPESAPDPPAP------------TAAPLRLPPAI 155
Query: 415 XXXXXAGSLPSPMQYAIPSGSALAKNDPRNSAVDRRKRKKDG 290
PMQ+A GS +AKND RNS +DRRKRKKDG
Sbjct: 156 PPTSGPSVAVPPMQFANAPGSVVAKNDTRNSGIDRRKRKKDG 197
>XP_015877717.1 PREDICTED: mediator of RNA polymerase II transcription subunit 31
isoform X2 [Ziziphus jujuba]
Length = 201
Score = 88.6 bits (218), Expect = 4e-18
Identities = 52/102 (50%), Positives = 54/102 (52%)
Frame = -3
Query: 595 ELAHRQQFYFWKNYRNNRLKHILPRPLXXXXXXXXXXXXXXXXXXXXPLMANXXXXXXXX 416
ELAHRQQFYFWKNYRNNRLKHILPRPL +
Sbjct: 108 ELAHRQQFYFWKNYRNNRLKHILPRPLPEPVATPATSAPPQQQPMPPVTPS--------I 159
Query: 415 XXXXXAGSLPSPMQYAIPSGSALAKNDPRNSAVDRRKRKKDG 290
S SPMQYA GS LAK D RNS VDRRKRKK+G
Sbjct: 160 PGTAAPASALSPMQYANNPGSTLAKVDMRNSGVDRRKRKKEG 201
>XP_015877715.1 PREDICTED: mediator of RNA polymerase II transcription subunit 31
isoform X1 [Ziziphus jujuba] XP_015877716.1 PREDICTED:
mediator of RNA polymerase II transcription subunit 31
isoform X1 [Ziziphus jujuba]
Length = 221
Score = 88.6 bits (218), Expect = 6e-18
Identities = 52/102 (50%), Positives = 54/102 (52%)
Frame = -3
Query: 595 ELAHRQQFYFWKNYRNNRLKHILPRPLXXXXXXXXXXXXXXXXXXXXPLMANXXXXXXXX 416
ELAHRQQFYFWKNYRNNRLKHILPRPL +
Sbjct: 128 ELAHRQQFYFWKNYRNNRLKHILPRPLPEPVATPATSAPPQQQPMPPVTPS--------I 179
Query: 415 XXXXXAGSLPSPMQYAIPSGSALAKNDPRNSAVDRRKRKKDG 290
S SPMQYA GS LAK D RNS VDRRKRKK+G
Sbjct: 180 PGTAAPASALSPMQYANNPGSTLAKVDMRNSGVDRRKRKKEG 221
>KNA13364.1 hypothetical protein SOVF_117610 [Spinacia oleracea]
Length = 197
Score = 87.4 bits (215), Expect = 1e-17
Identities = 51/106 (48%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Frame = -3
Query: 595 ELAHRQQFYFWKNYRNNRLKHILPRPLXXXXXXXXXXXXXXXXXXXXPLMANXXXXXXXX 416
ELAHRQQFYFWKNYRNNRLKHILPR L
Sbjct: 108 ELAHRQQFYFWKNYRNNRLKHILPRSLPEPGPEPPA----------------STAAPPLL 151
Query: 415 XXXXXAGSLPSP----MQYAIPSGSALAKNDPRNSAVDRRKRKKDG 290
S PSP MQY+IP S +AKND RNS +DRRKRKK+G
Sbjct: 152 PPAVPPTSAPSPALSAMQYSIPPASGVAKNDTRNSGIDRRKRKKEG 197
>XP_011003574.1 PREDICTED: mediator of RNA polymerase II transcription subunit
31-like [Populus euphratica]
Length = 254
Score = 88.6 bits (218), Expect = 1e-17
Identities = 48/101 (47%), Positives = 55/101 (54%)
Frame = -3
Query: 595 ELAHRQQFYFWKNYRNNRLKHILPRPLXXXXXXXXXXXXXXXXXXXXPLMANXXXXXXXX 416
ELAHRQQF+FWKNYRNNRLKHILPRPL A
Sbjct: 160 ELAHRQQFFFWKNYRNNRLKHILPRPLPEHVTAPPAPVQPPVQPAPPVSAAT-------L 212
Query: 415 XXXXXAGSLPSPMQYAIPSGSALAKNDPRNSAVDRRKRKKD 293
G++PSPM Y +P GSA K+D R+S DRRKRKK+
Sbjct: 213 GMPSAPGAVPSPMPYGMPPGSAFGKSDIRSSGSDRRKRKKE 253
>XP_009363740.1 PREDICTED: mediator of RNA polymerase II transcription subunit 31
isoform X1 [Pyrus x bretschneideri]
Length = 204
Score = 86.3 bits (212), Expect = 3e-17
Identities = 49/100 (49%), Positives = 55/100 (55%)
Frame = -3
Query: 595 ELAHRQQFYFWKNYRNNRLKHILPRPLXXXXXXXXXXXXXXXXXXXXPLMANXXXXXXXX 416
ELAHRQQFYFWKNYRNNRLKHILPRPL ++
Sbjct: 108 ELAHRQQFYFWKNYRNNRLKHILPRPL------PEPVPALPPPAPPQQVVPPVPPVPATT 161
Query: 415 XXXXXAGSLPSPMQYAIPSGSALAKNDPRNSAVDRRKRKK 296
PSPMQY++P GSA K +PRN+ VDRRKRKK
Sbjct: 162 VSVTATAPAPSPMQYSMPPGSA-PKVEPRNTGVDRRKRKK 200
>XP_008376354.1 PREDICTED: mediator of RNA polymerase II transcription subunit 31
isoform X1 [Malus domestica] XP_008357017.1 PREDICTED:
mediator of RNA polymerase II transcription subunit
31-like isoform X1 [Malus domestica] XP_008364855.1
PREDICTED: mediator of RNA polymerase II transcription
subunit 31-like isoform X1 [Malus domestica]
Length = 204
Score = 86.3 bits (212), Expect = 3e-17
Identities = 49/100 (49%), Positives = 55/100 (55%)
Frame = -3
Query: 595 ELAHRQQFYFWKNYRNNRLKHILPRPLXXXXXXXXXXXXXXXXXXXXPLMANXXXXXXXX 416
ELAHRQQFYFWKNYRNNRLKHILPRPL ++
Sbjct: 108 ELAHRQQFYFWKNYRNNRLKHILPRPL------PEPVPALPPPAPPQQVVPPVPPVPATT 161
Query: 415 XXXXXAGSLPSPMQYAIPSGSALAKNDPRNSAVDRRKRKK 296
PSPMQY++P GSA K +PRN+ VDRRKRKK
Sbjct: 162 VSVTATAPAPSPMQYSMPPGSA-PKVEPRNTGVDRRKRKK 200
>XP_011040328.1 PREDICTED: mediator of RNA polymerase II transcription subunit
31-like [Populus euphratica]
Length = 205
Score = 85.5 bits (210), Expect = 6e-17
Identities = 47/101 (46%), Positives = 57/101 (56%)
Frame = -3
Query: 595 ELAHRQQFYFWKNYRNNRLKHILPRPLXXXXXXXXXXXXXXXXXXXXPLMANXXXXXXXX 416
ELAHRQQF+FWKNYRNNRLKHILPRPL P+
Sbjct: 108 ELAHRQQFFFWKNYRNNRLKHILPRPL----PEPAAAPPAPAPPPPLPVQPVPPVPAATH 163
Query: 415 XXXXXAGSLPSPMQYAIPSGSALAKNDPRNSAVDRRKRKKD 293
+G++PSPM Y +P GSA K+D R+S +RRKRKK+
Sbjct: 164 GMLAASGAVPSPMPYGMPPGSAFGKSDIRSSGSERRKRKKE 204