BLASTX nr result
ID: Panax24_contig00007499
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00007499
(635 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KZM98779.1 hypothetical protein DCAR_013859 [Daucus carota subsp... 127 3e-30
XP_017246988.1 PREDICTED: 5'-3' exoribonuclease 3 [Daucus carota... 127 3e-30
XP_017253271.1 PREDICTED: 5'-3' exoribonuclease 3-like [Daucus c... 110 3e-24
CDP07414.1 unnamed protein product [Coffea canephora] 87 3e-16
XP_009591848.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 84 2e-15
XP_009591840.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 84 2e-15
XP_009591834.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 84 2e-15
XP_016513878.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 82 1e-14
XP_016513870.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 82 1e-14
XP_016513861.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 82 1e-14
XP_019223658.1 PREDICTED: 5'-3' exoribonuclease 3-like [Nicotian... 82 1e-14
XP_016485897.1 PREDICTED: 5'-3' exoribonuclease 3-like [Nicotian... 79 4e-14
XP_002280236.2 PREDICTED: 5'-3' exoribonuclease 3 [Vitis vinifera] 78 3e-13
CAN82967.1 hypothetical protein VITISV_021856 [Vitis vinifera] 76 2e-12
XP_016506516.1 PREDICTED: 5'-3' exoribonuclease 3-like [Nicotian... 74 5e-12
XP_016568375.1 PREDICTED: 5'-3' exoribonuclease 3 [Capsicum annuum] 73 2e-11
XP_019263961.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 72 3e-11
XP_019263960.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 72 3e-11
XP_016499023.1 PREDICTED: 5'-3' exoribonuclease 3-like, partial ... 70 2e-10
XP_019174495.1 PREDICTED: 5'-3' exoribonuclease 3 isoform X2 [Ip... 69 5e-10
>KZM98779.1 hypothetical protein DCAR_013859 [Daucus carota subsp. sativus]
Length = 1001
Score = 127 bits (319), Expect = 3e-30
Identities = 62/99 (62%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
Frame = -2
Query: 607 DQSRDYLSHGHYAPGLQQNGYVYQPRGPHHVAQ-TPPIPAGAQFYQQGGYNNRGSFQSYG 431
D +R Y S G+YA G NG+VYQPRGPHH Q PP PAGA +YQQGGYNNRGS+QS+
Sbjct: 892 DNNRGYSSQGYYAQGSHSNGHVYQPRGPHHAIQGRPPSPAGAPYYQQGGYNNRGSYQSHN 951
Query: 430 ATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSALD 314
NYHHQ+ G PP N RDY RPQ FGN FSALD
Sbjct: 952 VGNYHHQNGG---PPTGNQR-GRDYVRPQPFGNKFSALD 986
>XP_017246988.1 PREDICTED: 5'-3' exoribonuclease 3 [Daucus carota subsp. sativus]
Length = 1018
Score = 127 bits (319), Expect = 3e-30
Identities = 62/99 (62%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
Frame = -2
Query: 607 DQSRDYLSHGHYAPGLQQNGYVYQPRGPHHVAQ-TPPIPAGAQFYQQGGYNNRGSFQSYG 431
D +R Y S G+YA G NG+VYQPRGPHH Q PP PAGA +YQQGGYNNRGS+QS+
Sbjct: 909 DNNRGYSSQGYYAQGSHSNGHVYQPRGPHHAIQGRPPSPAGAPYYQQGGYNNRGSYQSHN 968
Query: 430 ATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSALD 314
NYHHQ+ G PP N RDY RPQ FGN FSALD
Sbjct: 969 VGNYHHQNGG---PPTGNQR-GRDYVRPQPFGNKFSALD 1003
>XP_017253271.1 PREDICTED: 5'-3' exoribonuclease 3-like [Daucus carota subsp.
sativus] KZM94234.1 hypothetical protein DCAR_017477
[Daucus carota subsp. sativus]
Length = 967
Score = 110 bits (274), Expect = 3e-24
Identities = 57/99 (57%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Frame = -2
Query: 607 DQSRDYLSHGHYAPGLQQNGYVYQPRGPHHVAQT-PPIPAGAQFYQQGGYNNRGSFQSYG 431
DQSRDY +++ G QN +VYQPRGP H Q PPI AG FYQQ GY Q+YG
Sbjct: 862 DQSRDYPPQVYHSQGSHQNRHVYQPRGPLHAVQAPPPIAAGVPFYQQVGY------QAYG 915
Query: 430 ATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSALD 314
NYHHQ+ G PP NP RDYGR QQFGN FSALD
Sbjct: 916 GANYHHQNGG---PPTVNPRVGRDYGRHQQFGNQFSALD 951
>CDP07414.1 unnamed protein product [Coffea canephora]
Length = 1086
Score = 87.0 bits (214), Expect = 3e-16
Identities = 48/106 (45%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Frame = -2
Query: 628 ERSELLTDQSRDYLSHGHYAPGLQQNGYVYQPRGPHHVAQTPPIPAGAQFYQQGG-YNNR 452
ERS+ + SR++ HG+Y GL Q G P P HV + P +P GA FYQQGG Y++
Sbjct: 974 ERSDRSVNGSREFPQHGYYQAGLHQTGGFGYPMHPQHVGRAP-LPPGATFYQQGGGYSSY 1032
Query: 451 GSFQSYGATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSALD 314
SFQ Y A NY+H + Q +PN R+Y P+ GN FSALD
Sbjct: 1033 ESFQPYEAGNYNHWAR------QVDPNVGREYRHPRHSGNQFSALD 1072
>XP_009591848.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X3 [Nicotiana
tomentosiformis]
Length = 945
Score = 84.3 bits (207), Expect = 2e-15
Identities = 48/99 (48%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Frame = -2
Query: 604 QSRDYLSHGHYAPGLQQNG-YVYQPRGPH--HVAQTPPIPAGAQFYQQGGYNNRGSFQSY 434
+SRDY S GH+ G+Q NG Y Y H HV Q P +P A F+QQ GYN S++ Y
Sbjct: 836 RSRDYRSRGHHTDGMQHNGGYSYSSHATHPQHVGQVP-VPPTANFHQQSGYNTSTSYEPY 894
Query: 433 GATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSAL 317
GA NY+ + G GR PQ N N R Y P GN FSAL
Sbjct: 895 GAGNYNQR--GAGRAPQTNQN-VRGYHHPHPSGNQFSAL 930
>XP_009591840.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X2 [Nicotiana
tomentosiformis]
Length = 1107
Score = 84.3 bits (207), Expect = 2e-15
Identities = 48/99 (48%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Frame = -2
Query: 604 QSRDYLSHGHYAPGLQQNG-YVYQPRGPH--HVAQTPPIPAGAQFYQQGGYNNRGSFQSY 434
+SRDY S GH+ G+Q NG Y Y H HV Q P +P A F+QQ GYN S++ Y
Sbjct: 998 RSRDYRSRGHHTDGMQHNGGYSYSSHATHPQHVGQVP-VPPTANFHQQSGYNTSTSYEPY 1056
Query: 433 GATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSAL 317
GA NY+ + G GR PQ N N R Y P GN FSAL
Sbjct: 1057 GAGNYNQR--GAGRAPQTNQN-VRGYHHPHPSGNQFSAL 1092
>XP_009591834.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Nicotiana
tomentosiformis]
Length = 1111
Score = 84.3 bits (207), Expect = 2e-15
Identities = 48/99 (48%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Frame = -2
Query: 604 QSRDYLSHGHYAPGLQQNG-YVYQPRGPH--HVAQTPPIPAGAQFYQQGGYNNRGSFQSY 434
+SRDY S GH+ G+Q NG Y Y H HV Q P +P A F+QQ GYN S++ Y
Sbjct: 1002 RSRDYRSRGHHTDGMQHNGGYSYSSHATHPQHVGQVP-VPPTANFHQQSGYNTSTSYEPY 1060
Query: 433 GATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSAL 317
GA NY+ + G GR PQ N N R Y P GN FSAL
Sbjct: 1061 GAGNYNQR--GAGRAPQTNQN-VRGYHHPHPSGNQFSAL 1096
>XP_016513878.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X3 [Nicotiana
tabacum]
Length = 945
Score = 82.4 bits (202), Expect = 1e-14
Identities = 47/99 (47%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Frame = -2
Query: 604 QSRDYLSHGHYAPGLQQNG-YVYQPRGPH--HVAQTPPIPAGAQFYQQGGYNNRGSFQSY 434
+SRDY S GH+ G+Q NG Y Y H HV Q P +P A F+QQ GYN S++ Y
Sbjct: 836 RSRDYRSRGHHTDGMQHNGGYSYSSHASHPQHVGQVP-VPPTANFHQQSGYNTSTSYEPY 894
Query: 433 GATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSAL 317
GA +Y+ + G GR PQ N N R Y P GN FSAL
Sbjct: 895 GAGSYNQR--GAGRAPQTNQN-VRGYHHPHPSGNQFSAL 930
>XP_016513870.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X2 [Nicotiana
tabacum]
Length = 1107
Score = 82.4 bits (202), Expect = 1e-14
Identities = 47/99 (47%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Frame = -2
Query: 604 QSRDYLSHGHYAPGLQQNG-YVYQPRGPH--HVAQTPPIPAGAQFYQQGGYNNRGSFQSY 434
+SRDY S GH+ G+Q NG Y Y H HV Q P +P A F+QQ GYN S++ Y
Sbjct: 998 RSRDYRSRGHHTDGMQHNGGYSYSSHASHPQHVGQVP-VPPTANFHQQSGYNTSTSYEPY 1056
Query: 433 GATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSAL 317
GA +Y+ + G GR PQ N N R Y P GN FSAL
Sbjct: 1057 GAGSYNQR--GAGRAPQTNQN-VRGYHHPHPSGNQFSAL 1092
>XP_016513861.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Nicotiana
tabacum]
Length = 1111
Score = 82.4 bits (202), Expect = 1e-14
Identities = 47/99 (47%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Frame = -2
Query: 604 QSRDYLSHGHYAPGLQQNG-YVYQPRGPH--HVAQTPPIPAGAQFYQQGGYNNRGSFQSY 434
+SRDY S GH+ G+Q NG Y Y H HV Q P +P A F+QQ GYN S++ Y
Sbjct: 1002 RSRDYRSRGHHTDGMQHNGGYSYSSHASHPQHVGQVP-VPPTANFHQQSGYNTSTSYEPY 1060
Query: 433 GATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSAL 317
GA +Y+ + G GR PQ N N R Y P GN FSAL
Sbjct: 1061 GAGSYNQR--GAGRAPQTNQN-VRGYHHPHPSGNQFSAL 1096
>XP_019223658.1 PREDICTED: 5'-3' exoribonuclease 3-like [Nicotiana attenuata]
OIT33908.1 5'-3' exoribonuclease 3 [Nicotiana attenuata]
Length = 1111
Score = 82.0 bits (201), Expect = 1e-14
Identities = 47/98 (47%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Frame = -2
Query: 601 SRDYLSHGHYAPGLQQNG-YVYQPRGPH--HVAQTPPIPAGAQFYQQGGYNNRGSFQSYG 431
SRDY S GH+ G+QQ+G Y Y H HV Q P +P F+QQ GYN S++ YG
Sbjct: 1003 SRDYRSRGHHTDGMQQSGGYSYSSHASHPQHVDQVP-VPPSTNFHQQSGYNTSTSYEPYG 1061
Query: 430 ATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSAL 317
A NY+ + GGG PQ N N R Y P GN FSAL
Sbjct: 1062 AGNYNQR--GGGGAPQTNQN-VRGYHHPHPSGNQFSAL 1096
>XP_016485897.1 PREDICTED: 5'-3' exoribonuclease 3-like [Nicotiana tabacum]
Length = 276
Score = 79.0 bits (193), Expect = 4e-14
Identities = 46/98 (46%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Frame = -2
Query: 601 SRDYLSHGHYAPGLQQNG-YVYQPRGPH--HVAQTPPIPAGAQFYQQGGYNNRGSFQSYG 431
SRDY + GH+ G+QQNG Y Y H HV Q P +P A F+QQ GY+ S++ YG
Sbjct: 168 SRDYRTRGHHTDGMQQNGGYSYSSHASHPQHVDQVP-VPPTANFHQQSGYSTSTSYEPYG 226
Query: 430 ATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSAL 317
NY+ + GGG PQ N N R Y P GN FSAL
Sbjct: 227 DGNYNQR--GGGWAPQTNQN-VRGYHHPHPSGNQFSAL 261
>XP_002280236.2 PREDICTED: 5'-3' exoribonuclease 3 [Vitis vinifera]
Length = 1065
Score = 78.2 bits (191), Expect = 3e-13
Identities = 49/103 (47%), Positives = 57/103 (55%), Gaps = 13/103 (12%)
Frame = -2
Query: 583 HGHYAPGLQQN-GYVYQPRGPHHVAQTPPIPAGAQFYQQGGYNNRGSFQSYGATNYHHQS 407
HG+Y PG QN G Y PR AQT IPAGAQ QGG+N+ +QSYGA++YH +
Sbjct: 955 HGYYQPGFHQNDGPGYHPR---QEAQTH-IPAGAQLPGQGGHNSHHGYQSYGASSYHEWA 1010
Query: 406 SG------------GGRPPQANPNPSRDYGRPQQFGNTFSALD 314
SG G PQ NP R YG PQQ GN +S LD
Sbjct: 1011 SGWPPEGNNQSNPRGHGHPQGNP---RGYGHPQQLGNQYSVLD 1050
>CAN82967.1 hypothetical protein VITISV_021856 [Vitis vinifera]
Length = 500
Score = 75.9 bits (185), Expect = 2e-12
Identities = 48/103 (46%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Frame = -2
Query: 583 HGHYAPGLQQN-GYVYQPRGPHHVAQTPPIPAGAQFYQQGGYNNRGSFQSYGATNYHHQS 407
HG+Y PG QN G Y PR AQT IPAGA QGG+N+ +QSYGA++YH +
Sbjct: 390 HGYYQPGFHQNDGPGYHPR---QEAQTH-IPAGAXLPGQGGHNSHHGYQSYGASSYHEWA 445
Query: 406 SG------------GGRPPQANPNPSRDYGRPQQFGNTFSALD 314
SG G PQ NP R YG PQQ GN +S LD
Sbjct: 446 SGWPPEGNNQSNPRGHGHPQGNP---RGYGHPQQLGNQYSVLD 485
>XP_016506516.1 PREDICTED: 5'-3' exoribonuclease 3-like [Nicotiana tabacum]
Length = 500
Score = 74.3 bits (181), Expect = 5e-12
Identities = 47/108 (43%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Frame = -2
Query: 628 ERSELLTDQSRDYLSHGHYAPGLQQN---GYVYQPRGPHHVAQTPPIPAGAQFYQQ-GGY 461
ER SRDY HGH++ + QN GY HV+QTP IP A F+QQ GY
Sbjct: 381 ERGGRPVPPSRDYHRHGHHSAVVPQNVGYGYSSHATRAQHVSQTP-IPPDAHFHQQQSGY 439
Query: 460 NNRGSFQSYGATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSAL 317
+N S+Q Y A +Y+ Q GGG PQ + N +R Y P+ N FSAL
Sbjct: 440 DNYTSYQPYVAGSYNQQ--GGGWTPQVSQNVARGYSNPRPSSNHFSAL 485
>XP_016568375.1 PREDICTED: 5'-3' exoribonuclease 3 [Capsicum annuum]
Length = 1091
Score = 73.2 bits (178), Expect = 2e-11
Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Frame = -2
Query: 628 ERSELLTDQSRDYLSHGHYAPGLQQN---GYVYQPRGPHHVAQTPPIPAGAQFYQQGGYN 458
ER +RDY HGH+A G QN GY P H++++P +P F+QQ GY+
Sbjct: 972 ERGGQPAPPNRDYHRHGHHASGTHQNVGYGYSSHANRPQHLSRSP-VPPIDHFHQQSGYS 1030
Query: 457 NRGSF-QSYGATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSAL 317
N S+ Q Y +Y+ + GGG PQ N N +R YG P+ N FSAL
Sbjct: 1031 NYPSYHQPYEPGSYNPR--GGGWTPQVNQNVARGYGNPRPSSNHFSAL 1076
>XP_019263961.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X2 [Nicotiana
attenuata]
Length = 973
Score = 72.4 bits (176), Expect = 3e-11
Identities = 46/108 (42%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Frame = -2
Query: 628 ERSELLTDQSRDYLSHGHYAPGLQQN---GYVYQPRGPHHVAQTPPIPAGAQFYQQ-GGY 461
ER SRDY HGH+ + QN GY HV+QTP IP A F+QQ GY
Sbjct: 854 ERGGRPVPPSRDYHRHGHHTAVVPQNVGYGYSSHATRAQHVSQTP-IPPDAHFHQQQSGY 912
Query: 460 NNRGSFQSYGATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSAL 317
+N S+Q Y A +Y+ + GGG PQ + N +R Y P+ N FSAL
Sbjct: 913 DNYTSYQPYVAGSYNQR--GGGWTPQVSQNVARGYSNPRPSSNHFSAL 958
>XP_019263960.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Nicotiana
attenuata] OIT36768.1 5'-3' exoribonuclease 3 [Nicotiana
attenuata]
Length = 1083
Score = 72.4 bits (176), Expect = 3e-11
Identities = 46/108 (42%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Frame = -2
Query: 628 ERSELLTDQSRDYLSHGHYAPGLQQN---GYVYQPRGPHHVAQTPPIPAGAQFYQQ-GGY 461
ER SRDY HGH+ + QN GY HV+QTP IP A F+QQ GY
Sbjct: 964 ERGGRPVPPSRDYHRHGHHTAVVPQNVGYGYSSHATRAQHVSQTP-IPPDAHFHQQQSGY 1022
Query: 460 NNRGSFQSYGATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSAL 317
+N S+Q Y A +Y+ + GGG PQ + N +R Y P+ N FSAL
Sbjct: 1023 DNYTSYQPYVAGSYNQR--GGGWTPQVSQNVARGYSNPRPSSNHFSAL 1068
>XP_016499023.1 PREDICTED: 5'-3' exoribonuclease 3-like, partial [Nicotiana tabacum]
Length = 1079
Score = 70.1 bits (170), Expect = 2e-10
Identities = 44/105 (41%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Frame = -2
Query: 628 ERSELLTDQSRDYLSHGHYAPGLQQN---GYVYQPRGPHHVAQTPPIPAGAQFYQQ-GGY 461
ER SRDY HGH++ + QN GY HV+QTP IP A F+QQ GY
Sbjct: 964 ERGGRPVPPSRDYHRHGHHSAVVPQNVGYGYSSHATRAQHVSQTP-IPPDAHFHQQQSGY 1022
Query: 460 NNRGSFQSYGATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTF 326
+N S+Q Y A +Y+ Q GGG PQ + N +R Y P+ N F
Sbjct: 1023 DNYTSYQPYVAGSYNQQ--GGGWTPQVSQNVARGYSNPRPSSNLF 1065
>XP_019174495.1 PREDICTED: 5'-3' exoribonuclease 3 isoform X2 [Ipomoea nil]
Length = 912
Score = 68.9 bits (167), Expect = 5e-10
Identities = 42/107 (39%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = -2
Query: 628 ERSELLTDQSRDYLSHGHYAPGLQQN-GYVYQPRGPHHV-AQTPPIPAGAQFYQQGGYNN 455
ER + QSRDY HG+YAPGLQ N G+ Y HH P P GYN+
Sbjct: 799 ERIDQSVAQSRDYHRHGYYAPGLQHNGGHSYHSGATHHQHVHLTPHPPPTHIPNHRGYNH 858
Query: 454 RGSFQSYGATNYHHQSSGGGRPPQANPNPSRDYGRPQQFGNTFSALD 314
Q Y + +Y+H SG G P +NP R Y P Q N ++AL+
Sbjct: 859 ----QPYESGSYNHLGSGQG--PHSNPGGGRGYNYPHQSSNQYAALN 899