BLASTX nr result
ID: Panax24_contig00007498
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00007498
(644 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KZM98779.1 hypothetical protein DCAR_013859 [Daucus carota subsp... 126 5e-30
XP_017246988.1 PREDICTED: 5'-3' exoribonuclease 3 [Daucus carota... 126 5e-30
XP_017253271.1 PREDICTED: 5'-3' exoribonuclease 3-like [Daucus c... 112 4e-25
XP_016485897.1 PREDICTED: 5'-3' exoribonuclease 3-like [Nicotian... 86 2e-16
CDP07414.1 unnamed protein product [Coffea canephora] 87 2e-16
XP_009591848.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 87 3e-16
XP_009591840.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 87 3e-16
XP_009591834.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 87 3e-16
XP_016513878.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 85 1e-15
XP_016513870.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 85 1e-15
XP_016513861.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 85 1e-15
XP_016568375.1 PREDICTED: 5'-3' exoribonuclease 3 [Capsicum annuum] 85 2e-15
XP_019223658.1 PREDICTED: 5'-3' exoribonuclease 3-like [Nicotian... 85 2e-15
XP_002280236.2 PREDICTED: 5'-3' exoribonuclease 3 [Vitis vinifera] 79 1e-13
XP_016506516.1 PREDICTED: 5'-3' exoribonuclease 3-like [Nicotian... 79 2e-13
CAN82967.1 hypothetical protein VITISV_021856 [Vitis vinifera] 77 7e-13
XP_019263961.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 77 8e-13
XP_019263960.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X... 77 8e-13
XP_011083516.1 PREDICTED: 5'-3' exoribonuclease 3 isoform X4 [Se... 75 4e-12
XP_011083517.1 PREDICTED: 5'-3' exoribonuclease 3 isoform X5 [Se... 75 4e-12
>KZM98779.1 hypothetical protein DCAR_013859 [Daucus carota subsp. sativus]
Length = 1001
Score = 126 bits (317), Expect = 5e-30
Identities = 60/101 (59%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Frame = -2
Query: 622 PADQSRDYLTHGHYAPGLHQNGYVYQPRGPHHVAQ-TPPIPVGAQFYQQGGYNNRGSFQS 446
P D +R Y + G+YA G H NG+VYQPRGPHH Q PP P GA +YQQGGYNNRGS+QS
Sbjct: 890 PLDNNRGYSSQGYYAQGSHSNGHVYQPRGPHHAIQGRPPSPAGAPYYQQGGYNNRGSYQS 949
Query: 445 YGGTNYHHQSGGGGRAPQANPNPSRGYGRPQQFGNTFSALD 323
+ NYHHQ+GG P R Y RPQ FGN FSALD
Sbjct: 950 HNVGNYHHQNGG----PPTGNQRGRDYVRPQPFGNKFSALD 986
>XP_017246988.1 PREDICTED: 5'-3' exoribonuclease 3 [Daucus carota subsp. sativus]
Length = 1018
Score = 126 bits (317), Expect = 5e-30
Identities = 60/101 (59%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Frame = -2
Query: 622 PADQSRDYLTHGHYAPGLHQNGYVYQPRGPHHVAQ-TPPIPVGAQFYQQGGYNNRGSFQS 446
P D +R Y + G+YA G H NG+VYQPRGPHH Q PP P GA +YQQGGYNNRGS+QS
Sbjct: 907 PLDNNRGYSSQGYYAQGSHSNGHVYQPRGPHHAIQGRPPSPAGAPYYQQGGYNNRGSYQS 966
Query: 445 YGGTNYHHQSGGGGRAPQANPNPSRGYGRPQQFGNTFSALD 323
+ NYHHQ+GG P R Y RPQ FGN FSALD
Sbjct: 967 HNVGNYHHQNGG----PPTGNQRGRDYVRPQPFGNKFSALD 1003
>XP_017253271.1 PREDICTED: 5'-3' exoribonuclease 3-like [Daucus carota subsp.
sativus] KZM94234.1 hypothetical protein DCAR_017477
[Daucus carota subsp. sativus]
Length = 967
Score = 112 bits (281), Expect = 4e-25
Identities = 58/101 (57%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Frame = -2
Query: 622 PADQSRDYLTHGHYAPGLHQNGYVYQPRGPHHVAQT-PPIPVGAQFYQQGGYNNRGSFQS 446
P DQSRDY +++ G HQN +VYQPRGP H Q PPI G FYQQ GY Q+
Sbjct: 860 PLDQSRDYPPQVYHSQGSHQNRHVYQPRGPLHAVQAPPPIAAGVPFYQQVGY------QA 913
Query: 445 YGGTNYHHQSGGGGRAPQANPNPSRGYGRPQQFGNTFSALD 323
YGG NYHHQ+GG P NP R YGR QQFGN FSALD
Sbjct: 914 YGGANYHHQNGG---PPTVNPRVGRDYGRHQQFGNQFSALD 951
>XP_016485897.1 PREDICTED: 5'-3' exoribonuclease 3-like [Nicotiana tabacum]
Length = 276
Score = 85.5 bits (210), Expect = 2e-16
Identities = 49/102 (48%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Frame = -2
Query: 622 PADQSRDYLTHGHYAPGLHQNG-YVYQPRGPH--HVAQTPPIPVGAQFYQQGGYNNRGSF 452
P SRDY T GH+ G+ QNG Y Y H HV Q P +P A F+QQ GY+ S+
Sbjct: 164 PVTHSRDYRTRGHHTDGMQQNGGYSYSSHASHPQHVDQVP-VPPTANFHQQSGYSTSTSY 222
Query: 451 QSYGGTNYHHQSGGGGRAPQANPNPSRGYGRPQQFGNTFSAL 326
+ YG NY+ + GGG APQ N N RGY P GN FSAL
Sbjct: 223 EPYGDGNYNQR--GGGWAPQTNQN-VRGYHHPHPSGNQFSAL 261
>CDP07414.1 unnamed protein product [Coffea canephora]
Length = 1086
Score = 87.4 bits (215), Expect = 2e-16
Identities = 49/106 (46%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Frame = -2
Query: 637 ERSELPADQSRDYLTHGHYAPGLHQNGYVYQPRGPHHVAQTPPIPVGAQFYQQ-GGYNNR 461
ERS+ + SR++ HG+Y GLHQ G P P HV + P+P GA FYQQ GGY++
Sbjct: 974 ERSDRSVNGSREFPQHGYYQAGLHQTGGFGYPMHPQHVGRA-PLPPGATFYQQGGGYSSY 1032
Query: 460 GSFQSYGGTNYHHQSGGGGRAPQANPNPSRGYGRPQQFGNTFSALD 323
SFQ Y NY+H A Q +PN R Y P+ GN FSALD
Sbjct: 1033 ESFQPYEAGNYNHW------ARQVDPNVGREYRHPRHSGNQFSALD 1072
>XP_009591848.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X3 [Nicotiana
tomentosiformis]
Length = 945
Score = 87.0 bits (214), Expect = 3e-16
Identities = 48/102 (47%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Frame = -2
Query: 622 PADQSRDYLTHGHYAPGL-HQNGYVYQPRGPH--HVAQTPPIPVGAQFYQQGGYNNRGSF 452
P +SRDY + GH+ G+ H GY Y H HV Q P +P A F+QQ GYN S+
Sbjct: 833 PVTRSRDYRSRGHHTDGMQHNGGYSYSSHATHPQHVGQVP-VPPTANFHQQSGYNTSTSY 891
Query: 451 QSYGGTNYHHQSGGGGRAPQANPNPSRGYGRPQQFGNTFSAL 326
+ YG NY+ + G GRAPQ N N RGY P GN FSAL
Sbjct: 892 EPYGAGNYNQR--GAGRAPQTNQN-VRGYHHPHPSGNQFSAL 930
>XP_009591840.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X2 [Nicotiana
tomentosiformis]
Length = 1107
Score = 87.0 bits (214), Expect = 3e-16
Identities = 48/102 (47%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Frame = -2
Query: 622 PADQSRDYLTHGHYAPGL-HQNGYVYQPRGPH--HVAQTPPIPVGAQFYQQGGYNNRGSF 452
P +SRDY + GH+ G+ H GY Y H HV Q P +P A F+QQ GYN S+
Sbjct: 995 PVTRSRDYRSRGHHTDGMQHNGGYSYSSHATHPQHVGQVP-VPPTANFHQQSGYNTSTSY 1053
Query: 451 QSYGGTNYHHQSGGGGRAPQANPNPSRGYGRPQQFGNTFSAL 326
+ YG NY+ + G GRAPQ N N RGY P GN FSAL
Sbjct: 1054 EPYGAGNYNQR--GAGRAPQTNQN-VRGYHHPHPSGNQFSAL 1092
>XP_009591834.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Nicotiana
tomentosiformis]
Length = 1111
Score = 87.0 bits (214), Expect = 3e-16
Identities = 48/102 (47%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Frame = -2
Query: 622 PADQSRDYLTHGHYAPGL-HQNGYVYQPRGPH--HVAQTPPIPVGAQFYQQGGYNNRGSF 452
P +SRDY + GH+ G+ H GY Y H HV Q P +P A F+QQ GYN S+
Sbjct: 999 PVTRSRDYRSRGHHTDGMQHNGGYSYSSHATHPQHVGQVP-VPPTANFHQQSGYNTSTSY 1057
Query: 451 QSYGGTNYHHQSGGGGRAPQANPNPSRGYGRPQQFGNTFSAL 326
+ YG NY+ + G GRAPQ N N RGY P GN FSAL
Sbjct: 1058 EPYGAGNYNQR--GAGRAPQTNQN-VRGYHHPHPSGNQFSAL 1096
>XP_016513878.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X3 [Nicotiana
tabacum]
Length = 945
Score = 85.1 bits (209), Expect = 1e-15
Identities = 47/102 (46%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Frame = -2
Query: 622 PADQSRDYLTHGHYAPGL-HQNGYVYQPRGPH--HVAQTPPIPVGAQFYQQGGYNNRGSF 452
P +SRDY + GH+ G+ H GY Y H HV Q P +P A F+QQ GYN S+
Sbjct: 833 PVTRSRDYRSRGHHTDGMQHNGGYSYSSHASHPQHVGQVP-VPPTANFHQQSGYNTSTSY 891
Query: 451 QSYGGTNYHHQSGGGGRAPQANPNPSRGYGRPQQFGNTFSAL 326
+ YG +Y+ + G GRAPQ N N RGY P GN FSAL
Sbjct: 892 EPYGAGSYNQR--GAGRAPQTNQN-VRGYHHPHPSGNQFSAL 930
>XP_016513870.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X2 [Nicotiana
tabacum]
Length = 1107
Score = 85.1 bits (209), Expect = 1e-15
Identities = 47/102 (46%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Frame = -2
Query: 622 PADQSRDYLTHGHYAPGL-HQNGYVYQPRGPH--HVAQTPPIPVGAQFYQQGGYNNRGSF 452
P +SRDY + GH+ G+ H GY Y H HV Q P +P A F+QQ GYN S+
Sbjct: 995 PVTRSRDYRSRGHHTDGMQHNGGYSYSSHASHPQHVGQVP-VPPTANFHQQSGYNTSTSY 1053
Query: 451 QSYGGTNYHHQSGGGGRAPQANPNPSRGYGRPQQFGNTFSAL 326
+ YG +Y+ + G GRAPQ N N RGY P GN FSAL
Sbjct: 1054 EPYGAGSYNQR--GAGRAPQTNQN-VRGYHHPHPSGNQFSAL 1092
>XP_016513861.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Nicotiana
tabacum]
Length = 1111
Score = 85.1 bits (209), Expect = 1e-15
Identities = 47/102 (46%), Positives = 58/102 (56%), Gaps = 3/102 (2%)
Frame = -2
Query: 622 PADQSRDYLTHGHYAPGL-HQNGYVYQPRGPH--HVAQTPPIPVGAQFYQQGGYNNRGSF 452
P +SRDY + GH+ G+ H GY Y H HV Q P +P A F+QQ GYN S+
Sbjct: 999 PVTRSRDYRSRGHHTDGMQHNGGYSYSSHASHPQHVGQVP-VPPTANFHQQSGYNTSTSY 1057
Query: 451 QSYGGTNYHHQSGGGGRAPQANPNPSRGYGRPQQFGNTFSAL 326
+ YG +Y+ + G GRAPQ N N RGY P GN FSAL
Sbjct: 1058 EPYGAGSYNQR--GAGRAPQTNQN-VRGYHHPHPSGNQFSAL 1096
>XP_016568375.1 PREDICTED: 5'-3' exoribonuclease 3 [Capsicum annuum]
Length = 1091
Score = 84.7 bits (208), Expect = 2e-15
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 4/108 (3%)
Frame = -2
Query: 637 ERSELPADQSRDYLTHGHYAPGLHQN---GYVYQPRGPHHVAQTPPIPVGAQFYQQGGYN 467
ER PA +RDY HGH+A G HQN GY P H++++P P+ F+QQ GY+
Sbjct: 972 ERGGQPAPPNRDYHRHGHHASGTHQNVGYGYSSHANRPQHLSRSPVPPID-HFHQQSGYS 1030
Query: 466 NRGSF-QSYGGTNYHHQSGGGGRAPQANPNPSRGYGRPQQFGNTFSAL 326
N S+ Q Y +Y+ + GGG PQ N N +RGYG P+ N FSAL
Sbjct: 1031 NYPSYHQPYEPGSYNPR--GGGWTPQVNQNVARGYGNPRPSSNHFSAL 1076
>XP_019223658.1 PREDICTED: 5'-3' exoribonuclease 3-like [Nicotiana attenuata]
OIT33908.1 5'-3' exoribonuclease 3 [Nicotiana attenuata]
Length = 1111
Score = 84.7 bits (208), Expect = 2e-15
Identities = 47/102 (46%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Frame = -2
Query: 622 PADQSRDYLTHGHYAPGLHQNG-YVYQPRGPH--HVAQTPPIPVGAQFYQQGGYNNRGSF 452
P SRDY + GH+ G+ Q+G Y Y H HV Q P +P F+QQ GYN S+
Sbjct: 999 PVTHSRDYRSRGHHTDGMQQSGGYSYSSHASHPQHVDQVP-VPPSTNFHQQSGYNTSTSY 1057
Query: 451 QSYGGTNYHHQSGGGGRAPQANPNPSRGYGRPQQFGNTFSAL 326
+ YG NY+ + GGG APQ N N RGY P GN FSAL
Sbjct: 1058 EPYGAGNYNQRGGGG--APQTNQN-VRGYHHPHPSGNQFSAL 1096
>XP_002280236.2 PREDICTED: 5'-3' exoribonuclease 3 [Vitis vinifera]
Length = 1065
Score = 79.3 bits (194), Expect = 1e-13
Identities = 48/103 (46%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Frame = -2
Query: 592 HGHYAPGLHQN-GYVYQPRGPHHVAQTPPIPVGAQFYQQGGYNNRGSFQSYGGTNYHHQS 416
HG+Y PG HQN G Y PR AQT IP GAQ QGG+N+ +QSYG ++YH +
Sbjct: 955 HGYYQPGFHQNDGPGYHPR---QEAQTH-IPAGAQLPGQGGHNSHHGYQSYGASSYHEWA 1010
Query: 415 GG------------GGRAPQANPNPSRGYGRPQQFGNTFSALD 323
G G PQ NP RGYG PQQ GN +S LD
Sbjct: 1011 SGWPPEGNNQSNPRGHGHPQGNP---RGYGHPQQLGNQYSVLD 1050
>XP_016506516.1 PREDICTED: 5'-3' exoribonuclease 3-like [Nicotiana tabacum]
Length = 500
Score = 79.0 bits (193), Expect = 2e-13
Identities = 48/108 (44%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Frame = -2
Query: 637 ERSELPADQSRDYLTHGHYAPGLHQN---GYVYQPRGPHHVAQTPPIPVGAQFYQQ-GGY 470
ER P SRDY HGH++ + QN GY HV+QTP IP A F+QQ GY
Sbjct: 381 ERGGRPVPPSRDYHRHGHHSAVVPQNVGYGYSSHATRAQHVSQTP-IPPDAHFHQQQSGY 439
Query: 469 NNRGSFQSYGGTNYHHQSGGGGRAPQANPNPSRGYGRPQQFGNTFSAL 326
+N S+Q Y +Y+ Q GGG PQ + N +RGY P+ N FSAL
Sbjct: 440 DNYTSYQPYVAGSYNQQ--GGGWTPQVSQNVARGYSNPRPSSNHFSAL 485
>CAN82967.1 hypothetical protein VITISV_021856 [Vitis vinifera]
Length = 500
Score = 77.0 bits (188), Expect = 7e-13
Identities = 47/103 (45%), Positives = 55/103 (53%), Gaps = 13/103 (12%)
Frame = -2
Query: 592 HGHYAPGLHQN-GYVYQPRGPHHVAQTPPIPVGAQFYQQGGYNNRGSFQSYGGTNYHHQS 416
HG+Y PG HQN G Y PR AQT IP GA QGG+N+ +QSYG ++YH +
Sbjct: 390 HGYYQPGFHQNDGPGYHPR---QEAQTH-IPAGAXLPGQGGHNSHHGYQSYGASSYHEWA 445
Query: 415 GG------------GGRAPQANPNPSRGYGRPQQFGNTFSALD 323
G G PQ NP RGYG PQQ GN +S LD
Sbjct: 446 SGWPPEGNNQSNPRGHGHPQGNP---RGYGHPQQLGNQYSVLD 485
>XP_019263961.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X2 [Nicotiana
attenuata]
Length = 973
Score = 77.0 bits (188), Expect = 8e-13
Identities = 47/108 (43%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Frame = -2
Query: 637 ERSELPADQSRDYLTHGHYAPGLHQN---GYVYQPRGPHHVAQTPPIPVGAQFYQQ-GGY 470
ER P SRDY HGH+ + QN GY HV+QTP IP A F+QQ GY
Sbjct: 854 ERGGRPVPPSRDYHRHGHHTAVVPQNVGYGYSSHATRAQHVSQTP-IPPDAHFHQQQSGY 912
Query: 469 NNRGSFQSYGGTNYHHQSGGGGRAPQANPNPSRGYGRPQQFGNTFSAL 326
+N S+Q Y +Y+ + GGG PQ + N +RGY P+ N FSAL
Sbjct: 913 DNYTSYQPYVAGSYNQR--GGGWTPQVSQNVARGYSNPRPSSNHFSAL 958
>XP_019263960.1 PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Nicotiana
attenuata] OIT36768.1 5'-3' exoribonuclease 3 [Nicotiana
attenuata]
Length = 1083
Score = 77.0 bits (188), Expect = 8e-13
Identities = 47/108 (43%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Frame = -2
Query: 637 ERSELPADQSRDYLTHGHYAPGLHQN---GYVYQPRGPHHVAQTPPIPVGAQFYQQ-GGY 470
ER P SRDY HGH+ + QN GY HV+QTP IP A F+QQ GY
Sbjct: 964 ERGGRPVPPSRDYHRHGHHTAVVPQNVGYGYSSHATRAQHVSQTP-IPPDAHFHQQQSGY 1022
Query: 469 NNRGSFQSYGGTNYHHQSGGGGRAPQANPNPSRGYGRPQQFGNTFSAL 326
+N S+Q Y +Y+ + GGG PQ + N +RGY P+ N FSAL
Sbjct: 1023 DNYTSYQPYVAGSYNQR--GGGWTPQVSQNVARGYSNPRPSSNHFSAL 1068
>XP_011083516.1 PREDICTED: 5'-3' exoribonuclease 3 isoform X4 [Sesamum indicum]
Length = 894
Score = 75.1 bits (183), Expect = 4e-12
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Frame = -2
Query: 637 ERSELPADQSRDYLTHGHYAPGLHQNGYVYQPRGPHHVAQTPPIPV--GAQFYQQGGYNN 464
E + PA RD G+YA G Q+G G + P +P+ GA ++Q GYNN
Sbjct: 783 ESNNRPAPHVRDNPRPGYYAQGPPQHG------GRDYSPYPPQVPIRQGAYYHQSSGYNN 836
Query: 463 RGSFQSYGGTNYHHQSGGGGRAPQANPNPSRGYGRPQQFGNTFSAL 326
+ +SYGG+ HHQ GGG AP N N RG+ P+Q GN FSAL
Sbjct: 837 AEADRSYGGS--HHQ-GGGSWAPPVNSNAGRGFNHPRQSGNQFSAL 879
>XP_011083517.1 PREDICTED: 5'-3' exoribonuclease 3 isoform X5 [Sesamum indicum]
Length = 1058
Score = 75.1 bits (183), Expect = 4e-12
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Frame = -2
Query: 637 ERSELPADQSRDYLTHGHYAPGLHQNGYVYQPRGPHHVAQTPPIPV--GAQFYQQGGYNN 464
E + PA RD G+YA G Q+G G + P +P+ GA ++Q GYNN
Sbjct: 947 ESNNRPAPHVRDNPRPGYYAQGPPQHG------GRDYSPYPPQVPIRQGAYYHQSSGYNN 1000
Query: 463 RGSFQSYGGTNYHHQSGGGGRAPQANPNPSRGYGRPQQFGNTFSAL 326
+ +SYGG+ HHQ GGG AP N N RG+ P+Q GN FSAL
Sbjct: 1001 AEADRSYGGS--HHQ-GGGSWAPPVNSNAGRGFNHPRQSGNQFSAL 1043