BLASTX nr result

ID: Panax24_contig00007450 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00007450
         (352 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_007049059.1 PREDICTED: transcription initiation factor IIE su...    54   5e-06
XP_003633196.1 PREDICTED: general transcription factor IIE subun...    54   5e-06
EOX93214.1 General transcription factor IIE subunit 1 isoform 1 ...    54   5e-06
EOX93215.1 General transcription factor IIE subunit 1 isoform 2 ...    54   5e-06
XP_019078622.1 PREDICTED: general transcription factor IIE subun...    54   5e-06
CAN74369.1 hypothetical protein VITISV_037867 [Vitis vinifera]         54   5e-06
XP_018825017.1 PREDICTED: general transcription factor IIE subun...    53   9e-06
XP_018825015.1 PREDICTED: general transcription factor IIE subun...    53   9e-06

>XP_007049059.1 PREDICTED: transcription initiation factor IIE subunit alpha
           [Theobroma cacao] XP_017984141.1 PREDICTED:
           transcription initiation factor IIE subunit alpha
           [Theobroma cacao] EOX93216.1 General transcription
           factor IIE subunit 1 isoform 3 [Theobroma cacao]
          Length = 473

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 24/32 (75%), Positives = 29/32 (90%), Gaps = 2/32 (6%)
 Frame = -2

Query: 348 AGNTNENFKVNDLNVEADASGD--DDIDWEDG 259
           AGNT E++KVNDLNVEA+ASGD  DD+DWE+G
Sbjct: 442 AGNTTESYKVNDLNVEAEASGDDEDDVDWEEG 473


>XP_003633196.1 PREDICTED: general transcription factor IIE subunit 1 isoform X2
           [Vitis vinifera] CBI17757.3 unnamed protein product,
           partial [Vitis vinifera]
          Length = 475

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 25/32 (78%), Positives = 29/32 (90%), Gaps = 2/32 (6%)
 Frame = -2

Query: 348 AGNTNENFKVNDLNVEADASGD--DDIDWEDG 259
           AGN +E+FKVNDLNV+ADASGD  DDIDWE+G
Sbjct: 444 AGNKSESFKVNDLNVQADASGDDEDDIDWEEG 475


>EOX93214.1 General transcription factor IIE subunit 1 isoform 1 [Theobroma
           cacao]
          Length = 475

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 24/32 (75%), Positives = 29/32 (90%), Gaps = 2/32 (6%)
 Frame = -2

Query: 348 AGNTNENFKVNDLNVEADASGD--DDIDWEDG 259
           AGNT E++KVNDLNVEA+ASGD  DD+DWE+G
Sbjct: 444 AGNTTESYKVNDLNVEAEASGDDEDDVDWEEG 475


>EOX93215.1 General transcription factor IIE subunit 1 isoform 2 [Theobroma
           cacao]
          Length = 480

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 24/32 (75%), Positives = 29/32 (90%), Gaps = 2/32 (6%)
 Frame = -2

Query: 348 AGNTNENFKVNDLNVEADASGD--DDIDWEDG 259
           AGNT E++KVNDLNVEA+ASGD  DD+DWE+G
Sbjct: 449 AGNTTESYKVNDLNVEAEASGDDEDDVDWEEG 480


>XP_019078622.1 PREDICTED: general transcription factor IIE subunit 1 isoform X1
           [Vitis vinifera] XP_019078623.1 PREDICTED: general
           transcription factor IIE subunit 1 isoform X1 [Vitis
           vinifera]
          Length = 481

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 25/32 (78%), Positives = 29/32 (90%), Gaps = 2/32 (6%)
 Frame = -2

Query: 348 AGNTNENFKVNDLNVEADASGD--DDIDWEDG 259
           AGN +E+FKVNDLNV+ADASGD  DDIDWE+G
Sbjct: 450 AGNKSESFKVNDLNVQADASGDDEDDIDWEEG 481


>CAN74369.1 hypothetical protein VITISV_037867 [Vitis vinifera]
          Length = 896

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 25/32 (78%), Positives = 29/32 (90%), Gaps = 2/32 (6%)
 Frame = -2

Query: 348 AGNTNENFKVNDLNVEADASGD--DDIDWEDG 259
           AGN +E+FKVNDLNV+ADASGD  DDIDWE+G
Sbjct: 865 AGNRSESFKVNDLNVQADASGDDEDDIDWEEG 896


>XP_018825017.1 PREDICTED: general transcription factor IIE subunit 1-like isoform
           X2 [Juglans regia]
          Length = 478

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 23/32 (71%), Positives = 29/32 (90%), Gaps = 2/32 (6%)
 Frame = -2

Query: 348 AGNTNENFKVNDLNVEADASGD--DDIDWEDG 259
           AGN NEN++V+DLN++ADASGD  DDIDWE+G
Sbjct: 444 AGNANENYEVHDLNIQADASGDDGDDIDWEEG 475


>XP_018825015.1 PREDICTED: general transcription factor IIE subunit 1-like isoform
           X1 [Juglans regia] XP_018825016.1 PREDICTED: general
           transcription factor IIE subunit 1-like isoform X1
           [Juglans regia]
          Length = 485

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 23/32 (71%), Positives = 29/32 (90%), Gaps = 2/32 (6%)
 Frame = -2

Query: 348 AGNTNENFKVNDLNVEADASGD--DDIDWEDG 259
           AGN NEN++V+DLN++ADASGD  DDIDWE+G
Sbjct: 451 AGNANENYEVHDLNIQADASGDDGDDIDWEEG 482


Top