BLASTX nr result

ID: Panax24_contig00007426 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00007426
         (414 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KVH99282.1 Mog1/PsbP, alpha/beta/alpha sandwich [Cynara carduncu...    59   5e-08
XP_002284256.1 PREDICTED: psbP-like protein 1, chloroplastic [Vi...    55   2e-06

>KVH99282.1 Mog1/PsbP, alpha/beta/alpha sandwich [Cynara cardunculus var.
           scolymus]
          Length = 210

 Score = 59.3 bits (142), Expect = 5e-08
 Identities = 30/46 (65%), Positives = 39/46 (84%)
 Frame = -1

Query: 141 MVSLQQSPSIHQTLLRSSSTQLGLYRHGQFRRGGVPLPVKAEQVSA 4
           M+SLQQ P IHQTLL ++STQLG+Y +G+F+R GVP  V+AEQ+SA
Sbjct: 1   MLSLQQLPCIHQTLLLNASTQLGVYANGRFQR-GVPFLVRAEQISA 45


>XP_002284256.1 PREDICTED: psbP-like protein 1, chloroplastic [Vitis vinifera]
           CBI31731.3 unnamed protein product, partial [Vitis
           vinifera]
          Length = 238

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 30/47 (63%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -1

Query: 141 MVSLQQSPSIHQTLLRSSSTQLGLYRHGQFR--RGGVPLPVKAEQVS 7
           M SLQ SP+IH+TL  +S +QLGL +HGQFR  R GV L V+AEQVS
Sbjct: 1   MASLQNSPAIHRTLFPNSFSQLGLQKHGQFRCCRRGVSLLVRAEQVS 47


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