BLASTX nr result
ID: Panax24_contig00007019
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00007019
(806 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017247841.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase ... 106 3e-22
KZM99191.1 hypothetical protein DCAR_013447 [Daucus carota subsp... 89 3e-16
KVH90549.1 Peptidase C19, ubiquitin carboxyl-terminal hydrolase ... 87 1e-15
XP_019153626.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase ... 74 3e-11
XP_019153625.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase ... 74 3e-11
OAY40716.1 hypothetical protein MANES_09G043300 [Manihot esculenta] 61 7e-07
XP_002270470.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase ... 53 6e-06
XP_010653252.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase ... 53 6e-06
>XP_017247841.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Daucus
carota subsp. sativus]
Length = 917
Score = 106 bits (264), Expect = 3e-22
Identities = 94/260 (36%), Positives = 124/260 (47%), Gaps = 27/260 (10%)
Frame = +3
Query: 63 MNLRLKRLTEALTFSLFKSFTSMFLLFRILKHFLSKTL-DLFSMDAMLFDYD----DVFD 227
MN RL R + L FSLF S + +LK LS+ L S+ +MLFDYD D F
Sbjct: 1 MNRRLNRFIKTLIFSLFHSLS-------LLKALLSENLIQSLSLHSMLFDYDNEYDDGFS 53
Query: 228 CPLSRPYERLSDIDHADQLYLVH----YXXRESLFSSDVTGVLYATRLSLSQAANGWDGD 395
PL+ P+ +D QLYLV+ R ++ SSD+TGV Y T S+ + W+ +
Sbjct: 54 TPLATPFTLPND---EPQLYLVNDRWWNEARGAVLSSDITGVSYLTTSMFSKVDDFWEVN 110
Query: 396 ELDPEIVMDLRRDAAXXXXXXXXXXXXXCEYALVLEWMFLRALKW--------------- 530
E EI M + R+ CEYAL+L+WMFLRALKW
Sbjct: 111 EHSSEISMKMMREETEGGGEGVL-----CEYALLLDWMFLRALKWHNDLNKGETILSAQD 165
Query: 531 TMKLEHLIKHAIFSVLRLAWRAK*LTISISCLVVLYFGKSCSLTLY---LQFRILDFSGQ 701
TM+ +K F AK IS F ++C++ QFRI DFSGQ
Sbjct: 166 TMQDPFSLKIRYFLGKMNILDAK---ISRKENEAGTFERACNIFCVDDDGQFRIRDFSGQ 222
Query: 702 ITQFCIDSRKLSDDLVLQNE 761
ITQF ++ R + D LQNE
Sbjct: 223 ITQFSVNDRNIPDS-ALQNE 241
>KZM99191.1 hypothetical protein DCAR_013447 [Daucus carota subsp. sativus]
Length = 761
Score = 88.6 bits (218), Expect = 3e-16
Identities = 77/214 (35%), Positives = 101/214 (47%), Gaps = 26/214 (12%)
Frame = +3
Query: 198 MLFDYD----DVFDCPLSRPYERLSDIDHADQLYLVH----YXXRESLFSSDVTGVLYAT 353
MLFDYD D F PL+ P+ +D QLYLV+ R ++ SSD+TGV Y T
Sbjct: 1 MLFDYDNEYDDGFSTPLATPFTLPND---EPQLYLVNDRWWNEARGAVLSSDITGVSYLT 57
Query: 354 RLSLSQAANGWDGDELDPEIVMDLRRDAAXXXXXXXXXXXXXCEYALVLEWMFLRALKW- 530
S+ + W+ +E EI M + R+ CEYAL+L+WMFLRALKW
Sbjct: 58 TSMFSKVDDFWEVNEHSSEISMKMMREETEGGGEGVL-----CEYALLLDWMFLRALKWH 112
Query: 531 --------------TMKLEHLIKHAIFSVLRLAWRAK*LTISISCLVVLYFGKSCSLTLY 668
TM+ +K F AK IS F ++C++
Sbjct: 113 NDLNKGETILSAQDTMQDPFSLKIRYFLGKMNILDAK---ISRKENEAGTFERACNIFCV 169
Query: 669 ---LQFRILDFSGQITQFCIDSRKLSDDLVLQNE 761
QFRI DFSGQITQF ++ R + D LQNE
Sbjct: 170 DDDGQFRIRDFSGQITQFSVNDRNIPDS-ALQNE 202
>KVH90549.1 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, partial
[Cynara cardunculus var. scolymus]
Length = 860
Score = 86.7 bits (213), Expect = 1e-15
Identities = 88/275 (32%), Positives = 120/275 (43%), Gaps = 47/275 (17%)
Frame = +3
Query: 81 RLTEALTFSLFKSFTSMFLLFRILKHFLSKTLDLFSMDAMLF-----DYDDVFDCPLSRP 245
RL + FSL +F S+ +L + +H LSKTLD MD++ F D D +F +R
Sbjct: 8 RLAQLFAFSLLANFLSLKILPTV-RHILSKTLDFLKMDSLFFSADGGDDDSLFGNSSARS 66
Query: 246 YERLSDIDHADQLYLVHYXX----RESLFSSDVTGVLYATRLSLSQAANGWDGDELDPEI 413
+ LSD+D ++LYLV + RESLF +V G+LY T LS D+ D EI
Sbjct: 67 IQSLSDLDD-ERLYLVDHRWWNETRESLFR-EVNGILYPTSSGLS--------DDFDLEI 116
Query: 414 VMDLRR-DAAXXXXXXXXXXXXXCEYALVLEWMFLRALK-----WTMKLEHLIKHAIF-- 569
++++R ++ EYALV EWMF RALK M+ H IF
Sbjct: 117 ILEMRTSESDSLDCRGEEQGVSGREYALVSEWMFYRALKCGGPPLQMRKNDFKAHVIFVS 176
Query: 570 -------------------SVLRLAWRAK*LTISISCLVVLY---------FGKSCSLTL 665
L R ++ + + LVV F KSC +
Sbjct: 177 GHYDMKYVGNSVAIEDNKADFFSLQVRLS-ISATTNSLVVRISQKGNEIGAFNKSCQIFC 235
Query: 666 YLQ--FRILDFSGQITQFCIDSRKLSDDLVLQNEE 764
I DFSGQIT+F + LSD NEE
Sbjct: 236 VKSGLLNIWDFSGQITKFFLQGSMLSDKSEQVNEE 270
>XP_019153626.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like isoform X2
[Ipomoea nil]
Length = 792
Score = 73.9 bits (180), Expect = 3e-11
Identities = 82/270 (30%), Positives = 128/270 (47%), Gaps = 36/270 (13%)
Frame = +3
Query: 63 MNLRLKRLTE-ALTF--SLFKSFT-SMFLLFRILKHFLSKTLDLFS--MDAMLFDYDDV- 221
M+ +L+RL+ ALTF SL+ S +LF L+ FLSKTL+ S M++ LF D
Sbjct: 1 MSRKLRRLSHSALTFATSLYASVRIKSAILFPFLRRFLSKTLNFLSPFMESWLFSSSDDD 60
Query: 222 ----FDCPLSRPYERLSDIDHADQLYLVHYXX----RESLFSS------DVTGVLYATRL 359
D S +LS +D + L+LV + +E SS +++G LY
Sbjct: 61 AGFGLDLSFSNFSPQLSHLD-PEPLFLVPFRWWSEAKEGFCSSGEVSESEISGFLYNATA 119
Query: 360 SLSQAANGWDGDELDPEIVMDLRRDAAXXXXXXXXXXXXXCEYALVLEWMFLRALKWTMK 539
L ++ D + E+V+D+ R+ ALV EWMFLRA+KW
Sbjct: 120 FLKRSDAFPDESSTETEVVLDMEREGETEDNEEGVSGKAL---ALVSEWMFLRAMKWHFD 176
Query: 540 LEHL--------IKHAIFSV-LRLAW----RAK*LTISISCLVVLYFGKSCSLTLYLQ-- 674
+++ H +FS+ +RL + + + IS+ V F ++CS+
Sbjct: 177 TKNVGGFLAPDDTLHDLFSLHIRLLYISQTNSLAIRISLKDNEVGVFDRACSIFCDTPGL 236
Query: 675 FRILDFSGQITQFCIDSRKLSDDLVLQNEE 764
F+I DFSGQ QF ++++KL + NEE
Sbjct: 237 FQIWDFSGQTIQFVLNNKKLLSNSGQLNEE 266
>XP_019153625.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like isoform X1
[Ipomoea nil]
Length = 915
Score = 73.9 bits (180), Expect = 3e-11
Identities = 82/270 (30%), Positives = 128/270 (47%), Gaps = 36/270 (13%)
Frame = +3
Query: 63 MNLRLKRLTE-ALTF--SLFKSFT-SMFLLFRILKHFLSKTLDLFS--MDAMLFDYDDV- 221
M+ +L+RL+ ALTF SL+ S +LF L+ FLSKTL+ S M++ LF D
Sbjct: 1 MSRKLRRLSHSALTFATSLYASVRIKSAILFPFLRRFLSKTLNFLSPFMESWLFSSSDDD 60
Query: 222 ----FDCPLSRPYERLSDIDHADQLYLVHYXX----RESLFSS------DVTGVLYATRL 359
D S +LS +D + L+LV + +E SS +++G LY
Sbjct: 61 AGFGLDLSFSNFSPQLSHLD-PEPLFLVPFRWWSEAKEGFCSSGEVSESEISGFLYNATA 119
Query: 360 SLSQAANGWDGDELDPEIVMDLRRDAAXXXXXXXXXXXXXCEYALVLEWMFLRALKWTMK 539
L ++ D + E+V+D+ R+ ALV EWMFLRA+KW
Sbjct: 120 FLKRSDAFPDESSTETEVVLDMEREGETEDNEEGVSGKAL---ALVSEWMFLRAMKWHFD 176
Query: 540 LEHL--------IKHAIFSV-LRLAW----RAK*LTISISCLVVLYFGKSCSLTLYLQ-- 674
+++ H +FS+ +RL + + + IS+ V F ++CS+
Sbjct: 177 TKNVGGFLAPDDTLHDLFSLHIRLLYISQTNSLAIRISLKDNEVGVFDRACSIFCDTPGL 236
Query: 675 FRILDFSGQITQFCIDSRKLSDDLVLQNEE 764
F+I DFSGQ QF ++++KL + NEE
Sbjct: 237 FQIWDFSGQTIQFVLNNKKLLSNSGQLNEE 266
>OAY40716.1 hypothetical protein MANES_09G043300 [Manihot esculenta]
Length = 933
Score = 60.8 bits (146), Expect = 7e-07
Identities = 76/270 (28%), Positives = 114/270 (42%), Gaps = 36/270 (13%)
Frame = +3
Query: 69 LRLKRLTEALTFSLFKSFTSMFLLFRILKH----FLSKTLDLFS--MDAMLFDY--DDVF 224
LRL +T++ F K FR+ K F KTL LF MD LF D+
Sbjct: 8 LRLSLITKSARFLSLKLSYFSLSTFRLCKSLARSFFFKTLALFPSLMDDDLFSSADDNFL 67
Query: 225 DCPLS--------RPYERLSDIDHADQLYLVHYXX-RESLFSSDVTGVLYATRLSLSQAA 377
D S +P+ D + D+LYLV RE+ ++ TGVLY +S
Sbjct: 68 DLEFSSASTSNYFQPHFLDDDDNGVDKLYLVPCSWWRETQMGANETGVLYDVSVS----- 122
Query: 378 NGWDGDELDPEIVMDLRRDAAXXXXXXXXXXXXXCEYALVLEWMFLRALKWTMKLEHLIK 557
++ D EIV+DL++ EYALV M+L+ALKW +
Sbjct: 123 -----NDDDMEIVLDLKKIEDSRKSSNAAEGFSGQEYALVSGTMWLQALKWHNDCNVAVT 177
Query: 558 HA------------IFSV---LRLAWRAK*LTISISCL--VVLYFGKSCSLTL--YLQFR 680
+F + L ++W L + IS ++ ++ ++C + + Q
Sbjct: 178 DVHRPFLSEDDLEDVFPIQIRLSVSWETNSLVVKISLKDNMIGFYKRACDIFVPEAEQVH 237
Query: 681 ILDFSGQITQFCIDSRKLSDDLVLQNEEKI 770
I DFSGQ TQF D L + + Q+ E+I
Sbjct: 238 IWDFSGQTTQFLNDRINLPNGSMGQSAEEI 267
>XP_002270470.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform X1
[Vitis vinifera]
Length = 961
Score = 52.8 bits (125), Expect(2) = 6e-06
Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 25/230 (10%)
Frame = +3
Query: 156 HFLSKTLDLFSMDAMLFDYDDVFDCPLSRPYERLSD--IDHADQLYLVHYXXRESLFSSD 329
+ L KTL F+MD +F DD F+ R R+S+ I +++Y V Y +
Sbjct: 56 YLLFKTLSFFTMDD-IFGEDDFFEFDDGRS-NRVSEEEIRVEEKVYFVPYRWLNEAHGTS 113
Query: 330 V---TGVLYATRLSLSQAANGWDGDELDPEIVMDLRRDAAXXXXXXXXXXXXXCEYALVL 500
+ G+LY S + + D +IV++LRR+ EYAL+
Sbjct: 114 LGENEGILYTASSSTCVGSMEIMSSDFDSQIVLNLRREEDNGKNEAAEEGVSGQEYALLS 173
Query: 501 EWMFLRALKW------------TMKLEHLIKHAIFSV---LRLAWRAK*LTISISCL--- 626
E M+LRALKW ++ + +F + L ++W L + IS
Sbjct: 174 ESMWLRALKWHNDSNAAEKDVGSILAAEVYTQDVFPLQIRLSVSWGTNSLLVKISQKDNP 233
Query: 627 VVLYFGKSCSLTLYLQ-FRILDFSGQITQFCIDSR-KLSDDLVLQNEEKI 770
+ +Y S + + I DFSGQ T ++ R K ++D + +++E+I
Sbjct: 234 IEIYERASTIFRVESELLHIWDFSGQTTLLLMNDRTKSANDYLSRSDEQI 283
Score = 25.8 bits (55), Expect(2) = 6e-06
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 92 SPNFLSLQILHFHVSPL 142
SP FLSL+I HF +S L
Sbjct: 31 SPTFLSLKITHFAISAL 47
>XP_010653252.1 PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform X4
[Vitis vinifera]
Length = 776
Score = 52.8 bits (125), Expect(2) = 6e-06
Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 25/230 (10%)
Frame = +3
Query: 156 HFLSKTLDLFSMDAMLFDYDDVFDCPLSRPYERLSD--IDHADQLYLVHYXXRESLFSSD 329
+ L KTL F+MD +F DD F+ R R+S+ I +++Y V Y +
Sbjct: 56 YLLFKTLSFFTMDD-IFGEDDFFEFDDGRS-NRVSEEEIRVEEKVYFVPYRWLNEAHGTS 113
Query: 330 V---TGVLYATRLSLSQAANGWDGDELDPEIVMDLRRDAAXXXXXXXXXXXXXCEYALVL 500
+ G+LY S + + D +IV++LRR+ EYAL+
Sbjct: 114 LGENEGILYTASSSTCVGSMEIMSSDFDSQIVLNLRREEDNGKNEAAEEGVSGQEYALLS 173
Query: 501 EWMFLRALKW------------TMKLEHLIKHAIFSV---LRLAWRAK*LTISISCL--- 626
E M+LRALKW ++ + +F + L ++W L + IS
Sbjct: 174 ESMWLRALKWHNDSNAAEKDVGSILAAEVYTQDVFPLQIRLSVSWGTNSLLVKISQKDNP 233
Query: 627 VVLYFGKSCSLTLYLQ-FRILDFSGQITQFCIDSR-KLSDDLVLQNEEKI 770
+ +Y S + + I DFSGQ T ++ R K ++D + +++E+I
Sbjct: 234 IEIYERASTIFRVESELLHIWDFSGQTTLLLMNDRTKSANDYLSRSDEQI 283
Score = 25.8 bits (55), Expect(2) = 6e-06
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 92 SPNFLSLQILHFHVSPL 142
SP FLSL+I HF +S L
Sbjct: 31 SPTFLSLKITHFAISAL 47