BLASTX nr result

ID: Panax24_contig00006956 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00006956
         (433 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017252890.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...   114   1e-26
XP_017252889.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...   114   1e-26
XP_017252888.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...   114   1e-26
KZM93449.1 hypothetical protein DCAR_016694 [Daucus carota subsp...   114   1e-26
XP_019075106.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...    91   2e-18
CBI37639.3 unnamed protein product, partial [Vitis vinifera]           91   2e-18
XP_010649440.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...    91   2e-18
XP_010649435.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...    91   2e-18
KVI08712.1 DNA mismatch repair, conserved site-containing protei...    77   8e-14
CDP01783.1 unnamed protein product [Coffea canephora]                  64   3e-09
XP_018505870.1 PREDICTED: DNA mismatch repair protein MLH3-like ...    56   3e-06
XP_017178351.1 PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repa...    55   5e-06
XP_019182756.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...    55   5e-06
XP_019182753.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...    55   5e-06
XP_019182752.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...    55   5e-06
XP_019182750.1 PREDICTED: DNA mismatch repair protein MLH3 isofo...    55   5e-06

>XP_017252890.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X3 [Daucus carota
            subsp. sativus]
          Length = 1045

 Score =  114 bits (284), Expect = 1e-26
 Identities = 65/141 (46%), Positives = 86/141 (60%), Gaps = 1/141 (0%)
 Frame = +2

Query: 8    NCSTSSCME-SGLKDYGSSQGDICNFQVDNLDYDLFPKCLDEYSDEIKWSSLEACGKNRS 184
            NC  SS +E SGL DY SSQ D C+F+VD+++YD  P   D +SD++K S  +   +++ 
Sbjct: 730  NCFASSRIEDSGLGDYPSSQKDACDFRVDDVEYDFLPNVFDFHSDKVKGSCSKPVDRDKG 789

Query: 185  MTGAEPSHHISSTICVDEDKDRRAQISCHEKAYGKRPRRSHSAPPLYRGKKKFLACNSGL 364
             + A  S  +      D + D R++I   EKAYGKRP RSHSAPP YRGKKKF   NS  
Sbjct: 790  RSDAASSSRVFLWNNEDANADGRSEIRGGEKAYGKRP-RSHSAPPYYRGKKKFSILNSLS 848

Query: 365  NMEAGNTQIATTYDGPTLKGT 427
              EA N Q+ +T+D   LK T
Sbjct: 849  YTEALNAQVVSTHDASILKET 869


>XP_017252889.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X2 [Daucus carota
            subsp. sativus]
          Length = 1133

 Score =  114 bits (284), Expect = 1e-26
 Identities = 65/141 (46%), Positives = 86/141 (60%), Gaps = 1/141 (0%)
 Frame = +2

Query: 8    NCSTSSCME-SGLKDYGSSQGDICNFQVDNLDYDLFPKCLDEYSDEIKWSSLEACGKNRS 184
            NC  SS +E SGL DY SSQ D C+F+VD+++YD  P   D +SD++K S  +   +++ 
Sbjct: 730  NCFASSRIEDSGLGDYPSSQKDACDFRVDDVEYDFLPNVFDFHSDKVKGSCSKPVDRDKG 789

Query: 185  MTGAEPSHHISSTICVDEDKDRRAQISCHEKAYGKRPRRSHSAPPLYRGKKKFLACNSGL 364
             + A  S  +      D + D R++I   EKAYGKRP RSHSAPP YRGKKKF   NS  
Sbjct: 790  RSDAASSSRVFLWNNEDANADGRSEIRGGEKAYGKRP-RSHSAPPYYRGKKKFSILNSLS 848

Query: 365  NMEAGNTQIATTYDGPTLKGT 427
              EA N Q+ +T+D   LK T
Sbjct: 849  YTEALNAQVVSTHDASILKET 869


>XP_017252888.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Daucus carota
            subsp. sativus]
          Length = 1235

 Score =  114 bits (284), Expect = 1e-26
 Identities = 65/141 (46%), Positives = 86/141 (60%), Gaps = 1/141 (0%)
 Frame = +2

Query: 8    NCSTSSCME-SGLKDYGSSQGDICNFQVDNLDYDLFPKCLDEYSDEIKWSSLEACGKNRS 184
            NC  SS +E SGL DY SSQ D C+F+VD+++YD  P   D +SD++K S  +   +++ 
Sbjct: 730  NCFASSRIEDSGLGDYPSSQKDACDFRVDDVEYDFLPNVFDFHSDKVKGSCSKPVDRDKG 789

Query: 185  MTGAEPSHHISSTICVDEDKDRRAQISCHEKAYGKRPRRSHSAPPLYRGKKKFLACNSGL 364
             + A  S  +      D + D R++I   EKAYGKRP RSHSAPP YRGKKKF   NS  
Sbjct: 790  RSDAASSSRVFLWNNEDANADGRSEIRGGEKAYGKRP-RSHSAPPYYRGKKKFSILNSLS 848

Query: 365  NMEAGNTQIATTYDGPTLKGT 427
              EA N Q+ +T+D   LK T
Sbjct: 849  YTEALNAQVVSTHDASILKET 869


>KZM93449.1 hypothetical protein DCAR_016694 [Daucus carota subsp. sativus]
          Length = 1344

 Score =  114 bits (284), Expect = 1e-26
 Identities = 65/141 (46%), Positives = 86/141 (60%), Gaps = 1/141 (0%)
 Frame = +2

Query: 8    NCSTSSCME-SGLKDYGSSQGDICNFQVDNLDYDLFPKCLDEYSDEIKWSSLEACGKNRS 184
            NC  SS +E SGL DY SSQ D C+F+VD+++YD  P   D +SD++K S  +   +++ 
Sbjct: 834  NCFASSRIEDSGLGDYPSSQKDACDFRVDDVEYDFLPNVFDFHSDKVKGSCSKPVDRDKG 893

Query: 185  MTGAEPSHHISSTICVDEDKDRRAQISCHEKAYGKRPRRSHSAPPLYRGKKKFLACNSGL 364
             + A  S  +      D + D R++I   EKAYGKRP RSHSAPP YRGKKKF   NS  
Sbjct: 894  RSDAASSSRVFLWNNEDANADGRSEIRGGEKAYGKRP-RSHSAPPYYRGKKKFSILNSLS 952

Query: 365  NMEAGNTQIATTYDGPTLKGT 427
              EA N Q+ +T+D   LK T
Sbjct: 953  YTEALNAQVVSTHDASILKET 973


>XP_019075106.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X3 [Vitis
            vinifera]
          Length = 1164

 Score = 90.5 bits (223), Expect = 2e-18
 Identities = 58/146 (39%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
 Frame = +2

Query: 8    NCSTSSCMESGL--KDYGSSQGDICNF-QVDNLDYDLFPKCLDEYSDEIKWSSLEACGKN 178
            NCS+SSC+ +GL  KDY     DI    + +NLD    P+  D  S E  W   ++CGK+
Sbjct: 645  NCSSSSCINTGLGLKDYTVPSRDIYRLLKENNLDNIFTPRHSDILSIETDWLYSKSCGKD 704

Query: 179  RSMTGAEPSHHI--SSTICVDEDKDRRAQI-SCHEKAYGKRPRRSHSAPPLYRGKKKFLA 349
             +   A PS  I  S+ I  DE+K  R +  +C +    K   RSHSAPP+YRGK+KFLA
Sbjct: 705  NNNNRAVPSCSIPLSTNIHKDENKKERLRYQNCGQIHASKERSRSHSAPPIYRGKRKFLA 764

Query: 350  CNSGLNMEAGNTQIATTYDGPTLKGT 427
             N    ME+    +  ++D PT   T
Sbjct: 765  LNDHWTMESKKVDVIDSHDAPTFPET 790


>CBI37639.3 unnamed protein product, partial [Vitis vinifera]
          Length = 1230

 Score = 90.5 bits (223), Expect = 2e-18
 Identities = 58/146 (39%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
 Frame = +2

Query: 8    NCSTSSCMESGL--KDYGSSQGDICNF-QVDNLDYDLFPKCLDEYSDEIKWSSLEACGKN 178
            NCS+SSC+ +GL  KDY     DI    + +NLD    P+  D  S E  W   ++CGK+
Sbjct: 711  NCSSSSCINTGLGLKDYTVPSRDIYRLLKENNLDNIFTPRHSDILSIETDWLYSKSCGKD 770

Query: 179  RSMTGAEPSHHI--SSTICVDEDKDRRAQI-SCHEKAYGKRPRRSHSAPPLYRGKKKFLA 349
             +   A PS  I  S+ I  DE+K  R +  +C +    K   RSHSAPP+YRGK+KFLA
Sbjct: 771  NNNNRAVPSCSIPLSTNIHKDENKKERLRYQNCGQIHASKERSRSHSAPPIYRGKRKFLA 830

Query: 350  CNSGLNMEAGNTQIATTYDGPTLKGT 427
             N    ME+    +  ++D PT   T
Sbjct: 831  LNDHWTMESKKVDVIDSHDAPTFPET 856


>XP_010649440.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X2 [Vitis
            vinifera]
          Length = 1245

 Score = 90.5 bits (223), Expect = 2e-18
 Identities = 58/146 (39%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
 Frame = +2

Query: 8    NCSTSSCMESGL--KDYGSSQGDICNF-QVDNLDYDLFPKCLDEYSDEIKWSSLEACGKN 178
            NCS+SSC+ +GL  KDY     DI    + +NLD    P+  D  S E  W   ++CGK+
Sbjct: 730  NCSSSSCINTGLGLKDYTVPSRDIYRLLKENNLDNIFTPRHSDILSIETDWLYSKSCGKD 789

Query: 179  RSMTGAEPSHHI--SSTICVDEDKDRRAQI-SCHEKAYGKRPRRSHSAPPLYRGKKKFLA 349
             +   A PS  I  S+ I  DE+K  R +  +C +    K   RSHSAPP+YRGK+KFLA
Sbjct: 790  NNNNRAVPSCSIPLSTNIHKDENKKERLRYQNCGQIHASKERSRSHSAPPIYRGKRKFLA 849

Query: 350  CNSGLNMEAGNTQIATTYDGPTLKGT 427
             N    ME+    +  ++D PT   T
Sbjct: 850  LNDHWTMESKKVDVIDSHDAPTFPET 875


>XP_010649435.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Vitis
            vinifera] XP_010649438.1 PREDICTED: DNA mismatch repair
            protein MLH3 isoform X1 [Vitis vinifera] XP_010649439.1
            PREDICTED: DNA mismatch repair protein MLH3 isoform X1
            [Vitis vinifera]
          Length = 1249

 Score = 90.5 bits (223), Expect = 2e-18
 Identities = 58/146 (39%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
 Frame = +2

Query: 8    NCSTSSCMESGL--KDYGSSQGDICNF-QVDNLDYDLFPKCLDEYSDEIKWSSLEACGKN 178
            NCS+SSC+ +GL  KDY     DI    + +NLD    P+  D  S E  W   ++CGK+
Sbjct: 730  NCSSSSCINTGLGLKDYTVPSRDIYRLLKENNLDNIFTPRHSDILSIETDWLYSKSCGKD 789

Query: 179  RSMTGAEPSHHI--SSTICVDEDKDRRAQI-SCHEKAYGKRPRRSHSAPPLYRGKKKFLA 349
             +   A PS  I  S+ I  DE+K  R +  +C +    K   RSHSAPP+YRGK+KFLA
Sbjct: 790  NNNNRAVPSCSIPLSTNIHKDENKKERLRYQNCGQIHASKERSRSHSAPPIYRGKRKFLA 849

Query: 350  CNSGLNMEAGNTQIATTYDGPTLKGT 427
             N    ME+    +  ++D PT   T
Sbjct: 850  LNDHWTMESKKVDVIDSHDAPTFPET 875


>KVI08712.1 DNA mismatch repair, conserved site-containing protein [Cynara
            cardunculus var. scolymus]
          Length = 1257

 Score = 77.4 bits (189), Expect = 8e-14
 Identities = 48/136 (35%), Positives = 75/136 (55%)
 Frame = +2

Query: 14   STSSCMESGLKDYGSSQGDICNFQVDNLDYDLFPKCLDEYSDEIKWSSLEACGKNRSMTG 193
            S+     S LK  G  + +I N Q+D++   LFP+  D + +E + +  E+ GK+++   
Sbjct: 740  SSHMVASSFLKGNGRCKKNIRNSQIDSV---LFPQQCD-FLNETERTCSESNGKHKTFVP 795

Query: 194  AEPSHHISSTICVDEDKDRRAQISCHEKAYGKRPRRSHSAPPLYRGKKKFLACNSGLNME 373
                HH+SS+   D +K + AQ S  +K     PRRS SAPP YRGKKKF A  S   ++
Sbjct: 796  VAAPHHVSSSFYADGEKSKIAQCSLQDK----HPRRSRSAPPSYRGKKKFFALTSWTTIK 851

Query: 374  AGNTQIATTYDGPTLK 421
            +G +     ++ PTL+
Sbjct: 852  SGKSCYKALHNAPTLQ 867


>CDP01783.1 unnamed protein product [Coffea canephora]
          Length = 1221

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
 Frame = +2

Query: 35   SGLKDYGSSQGDICNFQVDNLDYDLFPKCLDEYSDEIKWSSLEACGKNRSMTGAEPSHHI 214
            S  K Y    GD+   +    +   F  C   + DE+ W  +++CGKN     + P    
Sbjct: 719  SSFKFYSDHLGDVSEARGRKHNDFTFANCSSVFPDEMDWLLMQSCGKNSLPKVSNPLDQT 778

Query: 215  SSTICVDEDKDRRAQISCHEKAYGKRP--RRSHSAPPLYRGKKKFLACNSGLNMEAGNT 385
            S     D +K  R   S + K+ G++   RRSHSAPP YR ++KF+  N    ME G T
Sbjct: 779  SLPAQFDRNKFGRIHTS-NGKSIGQKKGARRSHSAPPFYRPRRKFIGLNYSWKMEGGRT 836


>XP_018505870.1 PREDICTED: DNA mismatch repair protein MLH3-like [Pyrus x
            bretschneideri]
          Length = 1226

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 39/120 (32%), Positives = 57/120 (47%)
 Frame = +2

Query: 8    NCSTSSCMESGLKDYGSSQGDICNFQVDNLDYDLFPKCLDEYSDEIKWSSLEACGKNRSM 187
            +C+T +  E    DY SS G    FQ  NLD +  P+C D  +DE  WSSL A GK+   
Sbjct: 740  HCTTHTDHELDFSDYSSS-GKF--FQPHNLDGEFSPECPDILADETGWSSLYARGKD--- 793

Query: 188  TGAEPSHHISSTICVDEDKDRRAQISCHEKAYGKRPRRSHSAPPLYRGKKKFLACNSGLN 367
                   ++   +   +    R Q     ++   R +RSHSAPP YR K+++    S  +
Sbjct: 794  -------NMDIELYKTQKDQFRDQDCLQNQSSIGRSKRSHSAPPFYRSKRRYSTFKSSFD 846


>XP_017178351.1 PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MLH3
           [Malus domestica]
          Length = 975

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
 Frame = +2

Query: 44  KDYGSSQGDICN----FQVDNLDYDLFPKCLDEYSDEIKWSSLEACGKNRSMTGAEPSHH 211
           KD+G    D  +    FQ+ NLD +   +C D  +DE  WS L  C K+   T       
Sbjct: 522 KDHGLDVSDYLDSGKFFQLHNLDGEFSLECPDILADETDWSCLHPCSKDNKGTDLYK--- 578

Query: 212 ISSTICVDEDKDRRAQISCHEKAYGKRPRRSHSAPPLYRGKKKFLACNSGLNMEAGNTQI 391
                 + + K R      ++ + G R RRSHS PP YR ++++   +  L   A     
Sbjct: 579 ------IQKHKFRVQDCLQNQSSIG-RLRRSHSXPPFYRSQRRYFTLSHPLTTTASKPDA 631

Query: 392 ATTYDGPT 415
            T  D PT
Sbjct: 632 QTFRDAPT 639


>XP_019182756.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X4 [Ipomoea nil]
          Length = 1050

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
 Frame = +2

Query: 14   STSSCMESGLKDYGSSQGDICNFQVDNLDYDLFPKCLD-EYSDE------------IKWS 154
            S+S  + S +KD    + +  +FQ  +L    FP  +  ++ D             I   
Sbjct: 676  SSSKTLSSDVKDCAGFKENSSDFQEHDLYDPFFPMEISTDFQDHNLKDAFSPNSFNIFTD 735

Query: 155  SLEACGKNRSMTGAEPSHHISSTICVDEDKDRRAQISCHEKAYG--KRPRRSHSAPPLYR 328
             +   G++  +T    S H +S+I  D D   R       K +   +R RRS+SAPP YR
Sbjct: 736  CINTWGED-GITNCSTSRHHASSIGFDCDSCTRVHPRNLSKMFDPYRRGRRSNSAPPFYR 794

Query: 329  GKKKFLACNSGLNMEAGNTQIATTYDGPTLKGT 427
            G+KKFLA +  L M  G   + T +  P   G+
Sbjct: 795  GRKKFLALSDSLTMTTGKVNLQTIHHCPGFPGS 827


>XP_019182753.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X3 [Ipomoea nil]
          Length = 1152

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
 Frame = +2

Query: 14   STSSCMESGLKDYGSSQGDICNFQVDNLDYDLFPKCLD-EYSDE------------IKWS 154
            S+S  + S +KD    + +  +FQ  +L    FP  +  ++ D             I   
Sbjct: 649  SSSKTLSSDVKDCAGFKENSSDFQEHDLYDPFFPMEISTDFQDHNLKDAFSPNSFNIFTD 708

Query: 155  SLEACGKNRSMTGAEPSHHISSTICVDEDKDRRAQISCHEKAYG--KRPRRSHSAPPLYR 328
             +   G++  +T    S H +S+I  D D   R       K +   +R RRS+SAPP YR
Sbjct: 709  CINTWGED-GITNCSTSRHHASSIGFDCDSCTRVHPRNLSKMFDPYRRGRRSNSAPPFYR 767

Query: 329  GKKKFLACNSGLNMEAGNTQIATTYDGPTLKGT 427
            G+KKFLA +  L M  G   + T +  P   G+
Sbjct: 768  GRKKFLALSDSLTMTTGKVNLQTIHHCPGFPGS 800


>XP_019182752.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X2 [Ipomoea nil]
          Length = 1152

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
 Frame = +2

Query: 14   STSSCMESGLKDYGSSQGDICNFQVDNLDYDLFPKCLD-EYSDE------------IKWS 154
            S+S  + S +KD    + +  +FQ  +L    FP  +  ++ D             I   
Sbjct: 649  SSSKTLSSDVKDCAGFKENSSDFQEHDLYDPFFPMEISTDFQDHNLKDAFSPNSFNIFTD 708

Query: 155  SLEACGKNRSMTGAEPSHHISSTICVDEDKDRRAQISCHEKAYG--KRPRRSHSAPPLYR 328
             +   G++  +T    S H +S+I  D D   R       K +   +R RRS+SAPP YR
Sbjct: 709  CINTWGED-GITNCSTSRHHASSIGFDCDSCTRVHPRNLSKMFDPYRRGRRSNSAPPFYR 767

Query: 329  GKKKFLACNSGLNMEAGNTQIATTYDGPTLKGT 427
            G+KKFLA +  L M  G   + T +  P   G+
Sbjct: 768  GRKKFLALSDSLTMTTGKVNLQTIHHCPGFPGS 800


>XP_019182750.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Ipomoea nil]
            XP_019182751.1 PREDICTED: DNA mismatch repair protein
            MLH3 isoform X1 [Ipomoea nil]
          Length = 1179

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
 Frame = +2

Query: 14   STSSCMESGLKDYGSSQGDICNFQVDNLDYDLFPKCLD-EYSDE------------IKWS 154
            S+S  + S +KD    + +  +FQ  +L    FP  +  ++ D             I   
Sbjct: 676  SSSKTLSSDVKDCAGFKENSSDFQEHDLYDPFFPMEISTDFQDHNLKDAFSPNSFNIFTD 735

Query: 155  SLEACGKNRSMTGAEPSHHISSTICVDEDKDRRAQISCHEKAYG--KRPRRSHSAPPLYR 328
             +   G++  +T    S H +S+I  D D   R       K +   +R RRS+SAPP YR
Sbjct: 736  CINTWGED-GITNCSTSRHHASSIGFDCDSCTRVHPRNLSKMFDPYRRGRRSNSAPPFYR 794

Query: 329  GKKKFLACNSGLNMEAGNTQIATTYDGPTLKGT 427
            G+KKFLA +  L M  G   + T +  P   G+
Sbjct: 795  GRKKFLALSDSLTMTTGKVNLQTIHHCPGFPGS 827


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