BLASTX nr result
ID: Panax24_contig00006956
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00006956
(433 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017252890.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 114 1e-26
XP_017252889.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 114 1e-26
XP_017252888.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 114 1e-26
KZM93449.1 hypothetical protein DCAR_016694 [Daucus carota subsp... 114 1e-26
XP_019075106.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 91 2e-18
CBI37639.3 unnamed protein product, partial [Vitis vinifera] 91 2e-18
XP_010649440.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 91 2e-18
XP_010649435.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 91 2e-18
KVI08712.1 DNA mismatch repair, conserved site-containing protei... 77 8e-14
CDP01783.1 unnamed protein product [Coffea canephora] 64 3e-09
XP_018505870.1 PREDICTED: DNA mismatch repair protein MLH3-like ... 56 3e-06
XP_017178351.1 PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repa... 55 5e-06
XP_019182756.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 55 5e-06
XP_019182753.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 55 5e-06
XP_019182752.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 55 5e-06
XP_019182750.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 55 5e-06
>XP_017252890.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X3 [Daucus carota
subsp. sativus]
Length = 1045
Score = 114 bits (284), Expect = 1e-26
Identities = 65/141 (46%), Positives = 86/141 (60%), Gaps = 1/141 (0%)
Frame = +2
Query: 8 NCSTSSCME-SGLKDYGSSQGDICNFQVDNLDYDLFPKCLDEYSDEIKWSSLEACGKNRS 184
NC SS +E SGL DY SSQ D C+F+VD+++YD P D +SD++K S + +++
Sbjct: 730 NCFASSRIEDSGLGDYPSSQKDACDFRVDDVEYDFLPNVFDFHSDKVKGSCSKPVDRDKG 789
Query: 185 MTGAEPSHHISSTICVDEDKDRRAQISCHEKAYGKRPRRSHSAPPLYRGKKKFLACNSGL 364
+ A S + D + D R++I EKAYGKRP RSHSAPP YRGKKKF NS
Sbjct: 790 RSDAASSSRVFLWNNEDANADGRSEIRGGEKAYGKRP-RSHSAPPYYRGKKKFSILNSLS 848
Query: 365 NMEAGNTQIATTYDGPTLKGT 427
EA N Q+ +T+D LK T
Sbjct: 849 YTEALNAQVVSTHDASILKET 869
>XP_017252889.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X2 [Daucus carota
subsp. sativus]
Length = 1133
Score = 114 bits (284), Expect = 1e-26
Identities = 65/141 (46%), Positives = 86/141 (60%), Gaps = 1/141 (0%)
Frame = +2
Query: 8 NCSTSSCME-SGLKDYGSSQGDICNFQVDNLDYDLFPKCLDEYSDEIKWSSLEACGKNRS 184
NC SS +E SGL DY SSQ D C+F+VD+++YD P D +SD++K S + +++
Sbjct: 730 NCFASSRIEDSGLGDYPSSQKDACDFRVDDVEYDFLPNVFDFHSDKVKGSCSKPVDRDKG 789
Query: 185 MTGAEPSHHISSTICVDEDKDRRAQISCHEKAYGKRPRRSHSAPPLYRGKKKFLACNSGL 364
+ A S + D + D R++I EKAYGKRP RSHSAPP YRGKKKF NS
Sbjct: 790 RSDAASSSRVFLWNNEDANADGRSEIRGGEKAYGKRP-RSHSAPPYYRGKKKFSILNSLS 848
Query: 365 NMEAGNTQIATTYDGPTLKGT 427
EA N Q+ +T+D LK T
Sbjct: 849 YTEALNAQVVSTHDASILKET 869
>XP_017252888.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Daucus carota
subsp. sativus]
Length = 1235
Score = 114 bits (284), Expect = 1e-26
Identities = 65/141 (46%), Positives = 86/141 (60%), Gaps = 1/141 (0%)
Frame = +2
Query: 8 NCSTSSCME-SGLKDYGSSQGDICNFQVDNLDYDLFPKCLDEYSDEIKWSSLEACGKNRS 184
NC SS +E SGL DY SSQ D C+F+VD+++YD P D +SD++K S + +++
Sbjct: 730 NCFASSRIEDSGLGDYPSSQKDACDFRVDDVEYDFLPNVFDFHSDKVKGSCSKPVDRDKG 789
Query: 185 MTGAEPSHHISSTICVDEDKDRRAQISCHEKAYGKRPRRSHSAPPLYRGKKKFLACNSGL 364
+ A S + D + D R++I EKAYGKRP RSHSAPP YRGKKKF NS
Sbjct: 790 RSDAASSSRVFLWNNEDANADGRSEIRGGEKAYGKRP-RSHSAPPYYRGKKKFSILNSLS 848
Query: 365 NMEAGNTQIATTYDGPTLKGT 427
EA N Q+ +T+D LK T
Sbjct: 849 YTEALNAQVVSTHDASILKET 869
>KZM93449.1 hypothetical protein DCAR_016694 [Daucus carota subsp. sativus]
Length = 1344
Score = 114 bits (284), Expect = 1e-26
Identities = 65/141 (46%), Positives = 86/141 (60%), Gaps = 1/141 (0%)
Frame = +2
Query: 8 NCSTSSCME-SGLKDYGSSQGDICNFQVDNLDYDLFPKCLDEYSDEIKWSSLEACGKNRS 184
NC SS +E SGL DY SSQ D C+F+VD+++YD P D +SD++K S + +++
Sbjct: 834 NCFASSRIEDSGLGDYPSSQKDACDFRVDDVEYDFLPNVFDFHSDKVKGSCSKPVDRDKG 893
Query: 185 MTGAEPSHHISSTICVDEDKDRRAQISCHEKAYGKRPRRSHSAPPLYRGKKKFLACNSGL 364
+ A S + D + D R++I EKAYGKRP RSHSAPP YRGKKKF NS
Sbjct: 894 RSDAASSSRVFLWNNEDANADGRSEIRGGEKAYGKRP-RSHSAPPYYRGKKKFSILNSLS 952
Query: 365 NMEAGNTQIATTYDGPTLKGT 427
EA N Q+ +T+D LK T
Sbjct: 953 YTEALNAQVVSTHDASILKET 973
>XP_019075106.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X3 [Vitis
vinifera]
Length = 1164
Score = 90.5 bits (223), Expect = 2e-18
Identities = 58/146 (39%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Frame = +2
Query: 8 NCSTSSCMESGL--KDYGSSQGDICNF-QVDNLDYDLFPKCLDEYSDEIKWSSLEACGKN 178
NCS+SSC+ +GL KDY DI + +NLD P+ D S E W ++CGK+
Sbjct: 645 NCSSSSCINTGLGLKDYTVPSRDIYRLLKENNLDNIFTPRHSDILSIETDWLYSKSCGKD 704
Query: 179 RSMTGAEPSHHI--SSTICVDEDKDRRAQI-SCHEKAYGKRPRRSHSAPPLYRGKKKFLA 349
+ A PS I S+ I DE+K R + +C + K RSHSAPP+YRGK+KFLA
Sbjct: 705 NNNNRAVPSCSIPLSTNIHKDENKKERLRYQNCGQIHASKERSRSHSAPPIYRGKRKFLA 764
Query: 350 CNSGLNMEAGNTQIATTYDGPTLKGT 427
N ME+ + ++D PT T
Sbjct: 765 LNDHWTMESKKVDVIDSHDAPTFPET 790
>CBI37639.3 unnamed protein product, partial [Vitis vinifera]
Length = 1230
Score = 90.5 bits (223), Expect = 2e-18
Identities = 58/146 (39%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Frame = +2
Query: 8 NCSTSSCMESGL--KDYGSSQGDICNF-QVDNLDYDLFPKCLDEYSDEIKWSSLEACGKN 178
NCS+SSC+ +GL KDY DI + +NLD P+ D S E W ++CGK+
Sbjct: 711 NCSSSSCINTGLGLKDYTVPSRDIYRLLKENNLDNIFTPRHSDILSIETDWLYSKSCGKD 770
Query: 179 RSMTGAEPSHHI--SSTICVDEDKDRRAQI-SCHEKAYGKRPRRSHSAPPLYRGKKKFLA 349
+ A PS I S+ I DE+K R + +C + K RSHSAPP+YRGK+KFLA
Sbjct: 771 NNNNRAVPSCSIPLSTNIHKDENKKERLRYQNCGQIHASKERSRSHSAPPIYRGKRKFLA 830
Query: 350 CNSGLNMEAGNTQIATTYDGPTLKGT 427
N ME+ + ++D PT T
Sbjct: 831 LNDHWTMESKKVDVIDSHDAPTFPET 856
>XP_010649440.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X2 [Vitis
vinifera]
Length = 1245
Score = 90.5 bits (223), Expect = 2e-18
Identities = 58/146 (39%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Frame = +2
Query: 8 NCSTSSCMESGL--KDYGSSQGDICNF-QVDNLDYDLFPKCLDEYSDEIKWSSLEACGKN 178
NCS+SSC+ +GL KDY DI + +NLD P+ D S E W ++CGK+
Sbjct: 730 NCSSSSCINTGLGLKDYTVPSRDIYRLLKENNLDNIFTPRHSDILSIETDWLYSKSCGKD 789
Query: 179 RSMTGAEPSHHI--SSTICVDEDKDRRAQI-SCHEKAYGKRPRRSHSAPPLYRGKKKFLA 349
+ A PS I S+ I DE+K R + +C + K RSHSAPP+YRGK+KFLA
Sbjct: 790 NNNNRAVPSCSIPLSTNIHKDENKKERLRYQNCGQIHASKERSRSHSAPPIYRGKRKFLA 849
Query: 350 CNSGLNMEAGNTQIATTYDGPTLKGT 427
N ME+ + ++D PT T
Sbjct: 850 LNDHWTMESKKVDVIDSHDAPTFPET 875
>XP_010649435.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Vitis
vinifera] XP_010649438.1 PREDICTED: DNA mismatch repair
protein MLH3 isoform X1 [Vitis vinifera] XP_010649439.1
PREDICTED: DNA mismatch repair protein MLH3 isoform X1
[Vitis vinifera]
Length = 1249
Score = 90.5 bits (223), Expect = 2e-18
Identities = 58/146 (39%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Frame = +2
Query: 8 NCSTSSCMESGL--KDYGSSQGDICNF-QVDNLDYDLFPKCLDEYSDEIKWSSLEACGKN 178
NCS+SSC+ +GL KDY DI + +NLD P+ D S E W ++CGK+
Sbjct: 730 NCSSSSCINTGLGLKDYTVPSRDIYRLLKENNLDNIFTPRHSDILSIETDWLYSKSCGKD 789
Query: 179 RSMTGAEPSHHI--SSTICVDEDKDRRAQI-SCHEKAYGKRPRRSHSAPPLYRGKKKFLA 349
+ A PS I S+ I DE+K R + +C + K RSHSAPP+YRGK+KFLA
Sbjct: 790 NNNNRAVPSCSIPLSTNIHKDENKKERLRYQNCGQIHASKERSRSHSAPPIYRGKRKFLA 849
Query: 350 CNSGLNMEAGNTQIATTYDGPTLKGT 427
N ME+ + ++D PT T
Sbjct: 850 LNDHWTMESKKVDVIDSHDAPTFPET 875
>KVI08712.1 DNA mismatch repair, conserved site-containing protein [Cynara
cardunculus var. scolymus]
Length = 1257
Score = 77.4 bits (189), Expect = 8e-14
Identities = 48/136 (35%), Positives = 75/136 (55%)
Frame = +2
Query: 14 STSSCMESGLKDYGSSQGDICNFQVDNLDYDLFPKCLDEYSDEIKWSSLEACGKNRSMTG 193
S+ S LK G + +I N Q+D++ LFP+ D + +E + + E+ GK+++
Sbjct: 740 SSHMVASSFLKGNGRCKKNIRNSQIDSV---LFPQQCD-FLNETERTCSESNGKHKTFVP 795
Query: 194 AEPSHHISSTICVDEDKDRRAQISCHEKAYGKRPRRSHSAPPLYRGKKKFLACNSGLNME 373
HH+SS+ D +K + AQ S +K PRRS SAPP YRGKKKF A S ++
Sbjct: 796 VAAPHHVSSSFYADGEKSKIAQCSLQDK----HPRRSRSAPPSYRGKKKFFALTSWTTIK 851
Query: 374 AGNTQIATTYDGPTLK 421
+G + ++ PTL+
Sbjct: 852 SGKSCYKALHNAPTLQ 867
>CDP01783.1 unnamed protein product [Coffea canephora]
Length = 1221
Score = 64.3 bits (155), Expect = 3e-09
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Frame = +2
Query: 35 SGLKDYGSSQGDICNFQVDNLDYDLFPKCLDEYSDEIKWSSLEACGKNRSMTGAEPSHHI 214
S K Y GD+ + + F C + DE+ W +++CGKN + P
Sbjct: 719 SSFKFYSDHLGDVSEARGRKHNDFTFANCSSVFPDEMDWLLMQSCGKNSLPKVSNPLDQT 778
Query: 215 SSTICVDEDKDRRAQISCHEKAYGKRP--RRSHSAPPLYRGKKKFLACNSGLNMEAGNT 385
S D +K R S + K+ G++ RRSHSAPP YR ++KF+ N ME G T
Sbjct: 779 SLPAQFDRNKFGRIHTS-NGKSIGQKKGARRSHSAPPFYRPRRKFIGLNYSWKMEGGRT 836
>XP_018505870.1 PREDICTED: DNA mismatch repair protein MLH3-like [Pyrus x
bretschneideri]
Length = 1226
Score = 55.8 bits (133), Expect = 3e-06
Identities = 39/120 (32%), Positives = 57/120 (47%)
Frame = +2
Query: 8 NCSTSSCMESGLKDYGSSQGDICNFQVDNLDYDLFPKCLDEYSDEIKWSSLEACGKNRSM 187
+C+T + E DY SS G FQ NLD + P+C D +DE WSSL A GK+
Sbjct: 740 HCTTHTDHELDFSDYSSS-GKF--FQPHNLDGEFSPECPDILADETGWSSLYARGKD--- 793
Query: 188 TGAEPSHHISSTICVDEDKDRRAQISCHEKAYGKRPRRSHSAPPLYRGKKKFLACNSGLN 367
++ + + R Q ++ R +RSHSAPP YR K+++ S +
Sbjct: 794 -------NMDIELYKTQKDQFRDQDCLQNQSSIGRSKRSHSAPPFYRSKRRYSTFKSSFD 846
>XP_017178351.1 PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MLH3
[Malus domestica]
Length = 975
Score = 55.1 bits (131), Expect = 5e-06
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Frame = +2
Query: 44 KDYGSSQGDICN----FQVDNLDYDLFPKCLDEYSDEIKWSSLEACGKNRSMTGAEPSHH 211
KD+G D + FQ+ NLD + +C D +DE WS L C K+ T
Sbjct: 522 KDHGLDVSDYLDSGKFFQLHNLDGEFSLECPDILADETDWSCLHPCSKDNKGTDLYK--- 578
Query: 212 ISSTICVDEDKDRRAQISCHEKAYGKRPRRSHSAPPLYRGKKKFLACNSGLNMEAGNTQI 391
+ + K R ++ + G R RRSHS PP YR ++++ + L A
Sbjct: 579 ------IQKHKFRVQDCLQNQSSIG-RLRRSHSXPPFYRSQRRYFTLSHPLTTTASKPDA 631
Query: 392 ATTYDGPT 415
T D PT
Sbjct: 632 QTFRDAPT 639
>XP_019182756.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X4 [Ipomoea nil]
Length = 1050
Score = 55.1 bits (131), Expect = 5e-06
Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Frame = +2
Query: 14 STSSCMESGLKDYGSSQGDICNFQVDNLDYDLFPKCLD-EYSDE------------IKWS 154
S+S + S +KD + + +FQ +L FP + ++ D I
Sbjct: 676 SSSKTLSSDVKDCAGFKENSSDFQEHDLYDPFFPMEISTDFQDHNLKDAFSPNSFNIFTD 735
Query: 155 SLEACGKNRSMTGAEPSHHISSTICVDEDKDRRAQISCHEKAYG--KRPRRSHSAPPLYR 328
+ G++ +T S H +S+I D D R K + +R RRS+SAPP YR
Sbjct: 736 CINTWGED-GITNCSTSRHHASSIGFDCDSCTRVHPRNLSKMFDPYRRGRRSNSAPPFYR 794
Query: 329 GKKKFLACNSGLNMEAGNTQIATTYDGPTLKGT 427
G+KKFLA + L M G + T + P G+
Sbjct: 795 GRKKFLALSDSLTMTTGKVNLQTIHHCPGFPGS 827
>XP_019182753.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X3 [Ipomoea nil]
Length = 1152
Score = 55.1 bits (131), Expect = 5e-06
Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Frame = +2
Query: 14 STSSCMESGLKDYGSSQGDICNFQVDNLDYDLFPKCLD-EYSDE------------IKWS 154
S+S + S +KD + + +FQ +L FP + ++ D I
Sbjct: 649 SSSKTLSSDVKDCAGFKENSSDFQEHDLYDPFFPMEISTDFQDHNLKDAFSPNSFNIFTD 708
Query: 155 SLEACGKNRSMTGAEPSHHISSTICVDEDKDRRAQISCHEKAYG--KRPRRSHSAPPLYR 328
+ G++ +T S H +S+I D D R K + +R RRS+SAPP YR
Sbjct: 709 CINTWGED-GITNCSTSRHHASSIGFDCDSCTRVHPRNLSKMFDPYRRGRRSNSAPPFYR 767
Query: 329 GKKKFLACNSGLNMEAGNTQIATTYDGPTLKGT 427
G+KKFLA + L M G + T + P G+
Sbjct: 768 GRKKFLALSDSLTMTTGKVNLQTIHHCPGFPGS 800
>XP_019182752.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X2 [Ipomoea nil]
Length = 1152
Score = 55.1 bits (131), Expect = 5e-06
Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Frame = +2
Query: 14 STSSCMESGLKDYGSSQGDICNFQVDNLDYDLFPKCLD-EYSDE------------IKWS 154
S+S + S +KD + + +FQ +L FP + ++ D I
Sbjct: 649 SSSKTLSSDVKDCAGFKENSSDFQEHDLYDPFFPMEISTDFQDHNLKDAFSPNSFNIFTD 708
Query: 155 SLEACGKNRSMTGAEPSHHISSTICVDEDKDRRAQISCHEKAYG--KRPRRSHSAPPLYR 328
+ G++ +T S H +S+I D D R K + +R RRS+SAPP YR
Sbjct: 709 CINTWGED-GITNCSTSRHHASSIGFDCDSCTRVHPRNLSKMFDPYRRGRRSNSAPPFYR 767
Query: 329 GKKKFLACNSGLNMEAGNTQIATTYDGPTLKGT 427
G+KKFLA + L M G + T + P G+
Sbjct: 768 GRKKFLALSDSLTMTTGKVNLQTIHHCPGFPGS 800
>XP_019182750.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Ipomoea nil]
XP_019182751.1 PREDICTED: DNA mismatch repair protein
MLH3 isoform X1 [Ipomoea nil]
Length = 1179
Score = 55.1 bits (131), Expect = 5e-06
Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Frame = +2
Query: 14 STSSCMESGLKDYGSSQGDICNFQVDNLDYDLFPKCLD-EYSDE------------IKWS 154
S+S + S +KD + + +FQ +L FP + ++ D I
Sbjct: 676 SSSKTLSSDVKDCAGFKENSSDFQEHDLYDPFFPMEISTDFQDHNLKDAFSPNSFNIFTD 735
Query: 155 SLEACGKNRSMTGAEPSHHISSTICVDEDKDRRAQISCHEKAYG--KRPRRSHSAPPLYR 328
+ G++ +T S H +S+I D D R K + +R RRS+SAPP YR
Sbjct: 736 CINTWGED-GITNCSTSRHHASSIGFDCDSCTRVHPRNLSKMFDPYRRGRRSNSAPPFYR 794
Query: 329 GKKKFLACNSGLNMEAGNTQIATTYDGPTLKGT 427
G+KKFLA + L M G + T + P G+
Sbjct: 795 GRKKFLALSDSLTMTTGKVNLQTIHHCPGFPGS 827