BLASTX nr result

ID: Panax24_contig00006452 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00006452
         (410 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_002278934.2 PREDICTED: zinc finger CCCH domain-containing pro...    57   5e-07
OAY43865.1 hypothetical protein MANES_08G104100 [Manihot esculen...    55   3e-06
XP_018812259.1 PREDICTED: zinc finger CCCH domain-containing pro...    54   9e-06
XP_018812187.1 PREDICTED: zinc finger CCCH domain-containing pro...    54   9e-06

>XP_002278934.2 PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
           [Vitis vinifera]
          Length = 441

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 31/60 (51%), Positives = 34/60 (56%)
 Frame = +3

Query: 3   AQYSADAAVVRRXXXXXXXXXXXXXXXEGLIEANSVNPRRLSTSETRQMPSSDNTIDTEG 182
           A  SADA VVRR               +GL+EA S  PRRLS  ETRQMP  D+ IDTEG
Sbjct: 382 ASSSADAPVVRRLLGSSSGSAALTLSSDGLVEAGSTKPRRLSLPETRQMPPGDDNIDTEG 441


>OAY43865.1 hypothetical protein MANES_08G104100 [Manihot esculenta] OAY43866.1
           hypothetical protein MANES_08G104100 [Manihot esculenta]
          Length = 442

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 32/60 (53%), Positives = 35/60 (58%)
 Frame = +3

Query: 3   AQYSADAAVVRRXXXXXXXXXXXXXXXEGLIEANSVNPRRLSTSETRQMPSSDNTIDTEG 182
           A  SADA V RR               EGL+EA S  PRRLS SETRQMP+ D+ IDTEG
Sbjct: 384 ASSSADAPV-RRFLGTSSGSAALTLSPEGLVEAGSTKPRRLSLSETRQMPAGDDNIDTEG 442


>XP_018812259.1 PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
           isoform X2 [Juglans regia]
          Length = 416

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 29/57 (50%), Positives = 33/57 (57%)
 Frame = +3

Query: 12  SADAAVVRRXXXXXXXXXXXXXXXEGLIEANSVNPRRLSTSETRQMPSSDNTIDTEG 182
           S+  A VRR               EGL++A S  PRRLS SETRQMPS D+ IDTEG
Sbjct: 360 SSGDAPVRRLLGSSSGTAALNLSSEGLVQAGSAKPRRLSLSETRQMPSGDDNIDTEG 416


>XP_018812187.1 PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
           isoform X1 [Juglans regia]
          Length = 446

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 29/57 (50%), Positives = 33/57 (57%)
 Frame = +3

Query: 12  SADAAVVRRXXXXXXXXXXXXXXXEGLIEANSVNPRRLSTSETRQMPSSDNTIDTEG 182
           S+  A VRR               EGL++A S  PRRLS SETRQMPS D+ IDTEG
Sbjct: 390 SSGDAPVRRLLGSSSGTAALNLSSEGLVQAGSAKPRRLSLSETRQMPSGDDNIDTEG 446


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