BLASTX nr result

ID: Panax24_contig00006124 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00006124
         (1015 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZN07468.1 hypothetical protein DCAR_008305 [Daucus carota subsp...    76   2e-11
XP_017235353.1 PREDICTED: regulator of nonsense transcripts 1 ho...    76   2e-11
KZN04760.1 hypothetical protein DCAR_005597 [Daucus carota subsp...    73   2e-10
XP_017235298.1 PREDICTED: regulator of nonsense transcripts 1 ho...    73   2e-10
KVH89724.1 RNA helicase UPF1, UPF2-interacting domain-containing...    73   2e-10
XP_012075131.1 PREDICTED: regulator of nonsense transcripts 1 ho...    72   3e-10
XP_007156614.1 hypothetical protein PHAVU_002G003300g [Phaseolus...    72   5e-10
XP_003517385.1 PREDICTED: regulator of nonsense transcripts 1 ho...    72   5e-10
XP_017427296.1 PREDICTED: regulator of nonsense transcripts 1 ho...    72   5e-10
XP_014520729.1 PREDICTED: regulator of nonsense transcripts 1 ho...    72   5e-10
XP_007156615.1 hypothetical protein PHAVU_002G003300g [Phaseolus...    72   5e-10
KOM44874.1 hypothetical protein LR48_Vigan06g018000 [Vigna angul...    72   5e-10
ABK96558.1 unknown [Populus trichocarpa x Populus deltoides]           71   7e-10
XP_006368472.1 RNA helicase family protein [Populus trichocarpa]...    71   1e-09
XP_011018658.1 PREDICTED: regulator of nonsense transcripts 1 ho...    71   1e-09
XP_015872266.1 PREDICTED: regulator of nonsense transcripts 1 ho...    70   1e-09
XP_002279304.2 PREDICTED: regulator of nonsense transcripts 1 ho...    70   2e-09
XP_010664057.1 PREDICTED: regulator of nonsense transcripts 1 ho...    70   2e-09
XP_018848213.1 PREDICTED: regulator of nonsense transcripts 1 ho...    70   2e-09
XP_018848212.1 PREDICTED: regulator of nonsense transcripts 1 ho...    70   2e-09

>KZN07468.1 hypothetical protein DCAR_008305 [Daucus carota subsp. sativus]
          Length = 1056

 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 31/33 (93%), Positives = 31/33 (93%)
 Frame = -3

Query: 101 GSFMPPGPPNGTHKPGLHTAGYPMPRVPIPPYH 3
           GSFMPPGPPNGTHKPGLH AGYPMPRVPI PYH
Sbjct: 761 GSFMPPGPPNGTHKPGLHPAGYPMPRVPITPYH 793


>XP_017235353.1 PREDICTED: regulator of nonsense transcripts 1 homolog [Daucus carota
            subsp. sativus]
          Length = 1254

 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 31/33 (93%), Positives = 31/33 (93%)
 Frame = -3

Query: 101  GSFMPPGPPNGTHKPGLHTAGYPMPRVPIPPYH 3
            GSFMPPGPPNGTHKPGLH AGYPMPRVPI PYH
Sbjct: 959  GSFMPPGPPNGTHKPGLHPAGYPMPRVPITPYH 991


>KZN04760.1 hypothetical protein DCAR_005597 [Daucus carota subsp. sativus]
          Length = 1221

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 30/33 (90%), Positives = 30/33 (90%)
 Frame = -3

Query: 101  GSFMPPGPPNGTHKPGLHTAGYPMPRVPIPPYH 3
            GSFMPPGP NGTHKPGLH A YPMPRVPIPPYH
Sbjct: 932  GSFMPPGPLNGTHKPGLHPAAYPMPRVPIPPYH 964


>XP_017235298.1 PREDICTED: regulator of nonsense transcripts 1 homolog [Daucus carota
            subsp. sativus]
          Length = 1248

 Score = 73.2 bits (178), Expect = 2e-10
 Identities = 30/33 (90%), Positives = 30/33 (90%)
 Frame = -3

Query: 101  GSFMPPGPPNGTHKPGLHTAGYPMPRVPIPPYH 3
            GSFMPPGP NGTHKPGLH A YPMPRVPIPPYH
Sbjct: 956  GSFMPPGPLNGTHKPGLHPAAYPMPRVPIPPYH 988


>KVH89724.1 RNA helicase UPF1, UPF2-interacting domain-containing protein [Cynara
            cardunculus var. scolymus]
          Length = 1236

 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 28/33 (84%), Positives = 30/33 (90%)
 Frame = -3

Query: 101  GSFMPPGPPNGTHKPGLHTAGYPMPRVPIPPYH 3
            GS+MPPGPPNGTHKP LH A YPMPRVP+PPYH
Sbjct: 950  GSYMPPGPPNGTHKPSLHPAAYPMPRVPLPPYH 982


>XP_012075131.1 PREDICTED: regulator of nonsense transcripts 1 homolog [Jatropha
            curcas] KDP45961.1 hypothetical protein JCGZ_11864
            [Jatropha curcas]
          Length = 1270

 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = -3

Query: 101  GSFMPPGPPNGTHKPGLHTAGYPMPRVPIPPYH 3
            GS+MPPGPPNGTHKPG+H  G+PMPRVPIPP+H
Sbjct: 975  GSYMPPGPPNGTHKPGVHPTGFPMPRVPIPPFH 1007


>XP_007156614.1 hypothetical protein PHAVU_002G003300g [Phaseolus vulgaris]
            ESW28608.1 hypothetical protein PHAVU_002G003300g
            [Phaseolus vulgaris]
          Length = 1248

 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 26/33 (78%), Positives = 32/33 (96%)
 Frame = -3

Query: 101  GSFMPPGPPNGTHKPGLHTAGYPMPRVPIPPYH 3
            GS++PPGPPNGTHKPG+H AGYP+PRVP+PP+H
Sbjct: 975  GSYIPPGPPNGTHKPGVHPAGYPVPRVPLPPFH 1007


>XP_003517385.1 PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine max]
            KRH77259.1 hypothetical protein GLYMA_01G202600 [Glycine
            max]
          Length = 1266

 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 26/33 (78%), Positives = 32/33 (96%)
 Frame = -3

Query: 101  GSFMPPGPPNGTHKPGLHTAGYPMPRVPIPPYH 3
            GS++PPGPPNGTHKPG+H AGYP+PRVP+PP+H
Sbjct: 973  GSYIPPGPPNGTHKPGVHPAGYPVPRVPLPPFH 1005


>XP_017427296.1 PREDICTED: regulator of nonsense transcripts 1 homolog [Vigna
            angularis] BAU00381.1 hypothetical protein VIGAN_10196800
            [Vigna angularis var. angularis]
          Length = 1268

 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 26/33 (78%), Positives = 32/33 (96%)
 Frame = -3

Query: 101  GSFMPPGPPNGTHKPGLHTAGYPMPRVPIPPYH 3
            GS++PPGPPNGTHKPG+H AGYP+PRVP+PP+H
Sbjct: 975  GSYIPPGPPNGTHKPGVHPAGYPVPRVPLPPFH 1007


>XP_014520729.1 PREDICTED: regulator of nonsense transcripts 1 homolog [Vigna radiata
            var. radiata]
          Length = 1268

 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 26/33 (78%), Positives = 32/33 (96%)
 Frame = -3

Query: 101  GSFMPPGPPNGTHKPGLHTAGYPMPRVPIPPYH 3
            GS++PPGPPNGTHKPG+H AGYP+PRVP+PP+H
Sbjct: 975  GSYIPPGPPNGTHKPGVHPAGYPVPRVPLPPFH 1007


>XP_007156615.1 hypothetical protein PHAVU_002G003300g [Phaseolus vulgaris]
            ESW28609.1 hypothetical protein PHAVU_002G003300g
            [Phaseolus vulgaris]
          Length = 1268

 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 26/33 (78%), Positives = 32/33 (96%)
 Frame = -3

Query: 101  GSFMPPGPPNGTHKPGLHTAGYPMPRVPIPPYH 3
            GS++PPGPPNGTHKPG+H AGYP+PRVP+PP+H
Sbjct: 975  GSYIPPGPPNGTHKPGVHPAGYPVPRVPLPPFH 1007


>KOM44874.1 hypothetical protein LR48_Vigan06g018000 [Vigna angularis]
          Length = 1294

 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 26/33 (78%), Positives = 32/33 (96%)
 Frame = -3

Query: 101  GSFMPPGPPNGTHKPGLHTAGYPMPRVPIPPYH 3
            GS++PPGPPNGTHKPG+H AGYP+PRVP+PP+H
Sbjct: 1001 GSYIPPGPPNGTHKPGVHPAGYPVPRVPLPPFH 1033


>ABK96558.1 unknown [Populus trichocarpa x Populus deltoides]
          Length = 582

 Score = 70.9 bits (172), Expect = 7e-10
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = -3

Query: 101 GSFMPPGPPNGTHKPGLHTAGYPMPRVPIPPYH 3
           GS+MPP PPNGTHKPG H AG+PMPRVPIPP+H
Sbjct: 288 GSYMPPAPPNGTHKPGAHPAGFPMPRVPIPPFH 320


>XP_006368472.1 RNA helicase family protein [Populus trichocarpa] ERP65041.1 RNA
            helicase family protein [Populus trichocarpa]
          Length = 1256

 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = -3

Query: 101  GSFMPPGPPNGTHKPGLHTAGYPMPRVPIPPYH 3
            GS+MPP PPNGTHKPG H AG+PMPRVPIPP+H
Sbjct: 962  GSYMPPAPPNGTHKPGAHPAGFPMPRVPIPPFH 994


>XP_011018658.1 PREDICTED: regulator of nonsense transcripts 1 homolog [Populus
            euphratica]
          Length = 1266

 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 27/33 (81%), Positives = 30/33 (90%)
 Frame = -3

Query: 101  GSFMPPGPPNGTHKPGLHTAGYPMPRVPIPPYH 3
            GS+MPP PPNGTHKPG H AG+PMPRVPIPP+H
Sbjct: 971  GSYMPPAPPNGTHKPGAHPAGFPMPRVPIPPFH 1003


>XP_015872266.1 PREDICTED: regulator of nonsense transcripts 1 homolog [Ziziphus
           jujuba]
          Length = 345

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = -3

Query: 101 GSFMPPGPPNGTHKPGLHTAGYPMPRVPIPPYH 3
           GS++PPGPPNGTHKPG+H  GYPMPRVPI P+H
Sbjct: 49  GSYLPPGPPNGTHKPGVHPGGYPMPRVPITPFH 81


>XP_002279304.2 PREDICTED: regulator of nonsense transcripts 1 homolog isoform X2
            [Vitis vinifera] CBI33955.3 unnamed protein product,
            partial [Vitis vinifera]
          Length = 1267

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = -3

Query: 101  GSFMPPGPPNGTHKPGLHTAGYPMPRVPIPPYH 3
            GS+MP GPPNGTHKPG+H AG+PMPRVP+PP+H
Sbjct: 963  GSYMPSGPPNGTHKPGVHPAGFPMPRVPLPPFH 995


>XP_010664057.1 PREDICTED: regulator of nonsense transcripts 1 homolog isoform X1
            [Vitis vinifera]
          Length = 1272

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = -3

Query: 101  GSFMPPGPPNGTHKPGLHTAGYPMPRVPIPPYH 3
            GS+MP GPPNGTHKPG+H AG+PMPRVP+PP+H
Sbjct: 963  GSYMPSGPPNGTHKPGVHPAGFPMPRVPLPPFH 995


>XP_018848213.1 PREDICTED: regulator of nonsense transcripts 1 homolog isoform X3
            [Juglans regia]
          Length = 1284

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = -3

Query: 101  GSFMPPGPPNGTHKPGLHTAGYPMPRVPIPPYH 3
            G+F+ PGPPNGTHKPG+H AGYPMPRVP+PP+H
Sbjct: 986  GTFISPGPPNGTHKPGVHPAGYPMPRVPLPPFH 1018


>XP_018848212.1 PREDICTED: regulator of nonsense transcripts 1 homolog isoform X2
            [Juglans regia]
          Length = 1285

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = -3

Query: 101  GSFMPPGPPNGTHKPGLHTAGYPMPRVPIPPYH 3
            G+F+ PGPPNGTHKPG+H AGYPMPRVP+PP+H
Sbjct: 987  GTFISPGPPNGTHKPGVHPAGYPMPRVPLPPFH 1019


Top