BLASTX nr result
ID: Panax24_contig00006075
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00006075
(546 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KVH89724.1 RNA helicase UPF1, UPF2-interacting domain-containing... 86 3e-16
KZN07468.1 hypothetical protein DCAR_008305 [Daucus carota subsp... 85 5e-16
XP_017235353.1 PREDICTED: regulator of nonsense transcripts 1 ho... 85 6e-16
KZN04760.1 hypothetical protein DCAR_005597 [Daucus carota subsp... 83 4e-15
XP_017235298.1 PREDICTED: regulator of nonsense transcripts 1 ho... 83 4e-15
XP_012075131.1 PREDICTED: regulator of nonsense transcripts 1 ho... 80 2e-14
OMO93082.1 hypothetical protein COLO4_17123 [Corchorus olitorius] 80 3e-14
XP_007156614.1 hypothetical protein PHAVU_002G003300g [Phaseolus... 80 4e-14
XP_003517385.1 PREDICTED: regulator of nonsense transcripts 1 ho... 80 4e-14
XP_017427296.1 PREDICTED: regulator of nonsense transcripts 1 ho... 80 4e-14
XP_014520729.1 PREDICTED: regulator of nonsense transcripts 1 ho... 80 4e-14
XP_007156615.1 hypothetical protein PHAVU_002G003300g [Phaseolus... 80 4e-14
KOM44874.1 hypothetical protein LR48_Vigan06g018000 [Vigna angul... 80 4e-14
ABK96558.1 unknown [Populus trichocarpa x Populus deltoides] 79 7e-14
XP_006368472.1 RNA helicase family protein [Populus trichocarpa]... 79 8e-14
XP_011018658.1 PREDICTED: regulator of nonsense transcripts 1 ho... 79 8e-14
XP_015872266.1 PREDICTED: regulator of nonsense transcripts 1 ho... 78 1e-13
XP_002279304.2 PREDICTED: regulator of nonsense transcripts 1 ho... 78 1e-13
XP_010664057.1 PREDICTED: regulator of nonsense transcripts 1 ho... 78 1e-13
XP_002528794.1 PREDICTED: regulator of nonsense transcripts 1 ho... 78 2e-13
>KVH89724.1 RNA helicase UPF1, UPF2-interacting domain-containing protein [Cynara
cardunculus var. scolymus]
Length = 1236
Score = 85.9 bits (211), Expect = 3e-16
Identities = 35/42 (83%), Positives = 37/42 (88%)
Frame = +3
Query: 420 GSFMPPGPPNGTHKPGLHTAGYPMPRVLIPPYHGVPQPYAIP 545
GS+MPPGPPNGTHKP LH A YPMPRV +PPYHG PQPYAIP
Sbjct: 950 GSYMPPGPPNGTHKPSLHPAAYPMPRVPLPPYHGGPQPYAIP 991
>KZN07468.1 hypothetical protein DCAR_008305 [Daucus carota subsp. sativus]
Length = 1056
Score = 85.1 bits (209), Expect = 5e-16
Identities = 38/43 (88%), Positives = 38/43 (88%), Gaps = 1/43 (2%)
Frame = +3
Query: 420 GSFMPPGPPNGTHKPGLHTAGYPMPRVLIPPYH-GVPQPYAIP 545
GSFMPPGPPNGTHKPGLH AGYPMPRV I PYH G PQPYAIP
Sbjct: 761 GSFMPPGPPNGTHKPGLHPAGYPMPRVPITPYHGGPPQPYAIP 803
>XP_017235353.1 PREDICTED: regulator of nonsense transcripts 1 homolog [Daucus carota
subsp. sativus]
Length = 1254
Score = 85.1 bits (209), Expect = 6e-16
Identities = 38/43 (88%), Positives = 38/43 (88%), Gaps = 1/43 (2%)
Frame = +3
Query: 420 GSFMPPGPPNGTHKPGLHTAGYPMPRVLIPPYH-GVPQPYAIP 545
GSFMPPGPPNGTHKPGLH AGYPMPRV I PYH G PQPYAIP
Sbjct: 959 GSFMPPGPPNGTHKPGLHPAGYPMPRVPITPYHGGPPQPYAIP 1001
>KZN04760.1 hypothetical protein DCAR_005597 [Daucus carota subsp. sativus]
Length = 1221
Score = 82.8 bits (203), Expect = 4e-15
Identities = 37/43 (86%), Positives = 37/43 (86%), Gaps = 1/43 (2%)
Frame = +3
Query: 420 GSFMPPGPPNGTHKPGLHTAGYPMPRVLIPPYHGV-PQPYAIP 545
GSFMPPGP NGTHKPGLH A YPMPRV IPPYHG PQPYAIP
Sbjct: 932 GSFMPPGPLNGTHKPGLHPAAYPMPRVPIPPYHGAPPQPYAIP 974
>XP_017235298.1 PREDICTED: regulator of nonsense transcripts 1 homolog [Daucus carota
subsp. sativus]
Length = 1248
Score = 82.8 bits (203), Expect = 4e-15
Identities = 37/43 (86%), Positives = 37/43 (86%), Gaps = 1/43 (2%)
Frame = +3
Query: 420 GSFMPPGPPNGTHKPGLHTAGYPMPRVLIPPYHGV-PQPYAIP 545
GSFMPPGP NGTHKPGLH A YPMPRV IPPYHG PQPYAIP
Sbjct: 956 GSFMPPGPLNGTHKPGLHPAAYPMPRVPIPPYHGAPPQPYAIP 998
>XP_012075131.1 PREDICTED: regulator of nonsense transcripts 1 homolog [Jatropha
curcas] KDP45961.1 hypothetical protein JCGZ_11864
[Jatropha curcas]
Length = 1270
Score = 80.5 bits (197), Expect = 2e-14
Identities = 34/44 (77%), Positives = 38/44 (86%), Gaps = 2/44 (4%)
Frame = +3
Query: 420 GSFMPPGPPNGTHKPGLHTAGYPMPRVLIPPYHGVP--QPYAIP 545
GS+MPPGPPNGTHKPG+H G+PMPRV IPP+HG P QPYAIP
Sbjct: 975 GSYMPPGPPNGTHKPGVHPTGFPMPRVPIPPFHGGPPSQPYAIP 1018
>OMO93082.1 hypothetical protein COLO4_17123 [Corchorus olitorius]
Length = 1170
Score = 80.1 bits (196), Expect = 3e-14
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = +3
Query: 420 GSFMPPGPPNGTHKPGLHTAGYPMPRVLIPPYHGVPQPYAIP 545
G++MPPGPPNGTHKPG+H G+PMPRV +PP+ G PQPYAIP
Sbjct: 979 GAYMPPGPPNGTHKPGVHPTGFPMPRVPLPPFPGPPQPYAIP 1020
>XP_007156614.1 hypothetical protein PHAVU_002G003300g [Phaseolus vulgaris]
ESW28608.1 hypothetical protein PHAVU_002G003300g
[Phaseolus vulgaris]
Length = 1248
Score = 79.7 bits (195), Expect = 4e-14
Identities = 33/44 (75%), Positives = 39/44 (88%), Gaps = 2/44 (4%)
Frame = +3
Query: 420 GSFMPPGPPNGTHKPGLHTAGYPMPRVLIPPYHGVP--QPYAIP 545
GS++PPGPPNGTHKPG+H AGYP+PRV +PP+HG P QPYAIP
Sbjct: 975 GSYIPPGPPNGTHKPGVHPAGYPVPRVPLPPFHGGPQSQPYAIP 1018
>XP_003517385.1 PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine max]
KRH77259.1 hypothetical protein GLYMA_01G202600 [Glycine
max]
Length = 1266
Score = 79.7 bits (195), Expect = 4e-14
Identities = 33/44 (75%), Positives = 39/44 (88%), Gaps = 2/44 (4%)
Frame = +3
Query: 420 GSFMPPGPPNGTHKPGLHTAGYPMPRVLIPPYHGVP--QPYAIP 545
GS++PPGPPNGTHKPG+H AGYP+PRV +PP+HG P QPYAIP
Sbjct: 973 GSYIPPGPPNGTHKPGVHPAGYPVPRVPLPPFHGGPQSQPYAIP 1016
>XP_017427296.1 PREDICTED: regulator of nonsense transcripts 1 homolog [Vigna
angularis] BAU00381.1 hypothetical protein VIGAN_10196800
[Vigna angularis var. angularis]
Length = 1268
Score = 79.7 bits (195), Expect = 4e-14
Identities = 33/44 (75%), Positives = 39/44 (88%), Gaps = 2/44 (4%)
Frame = +3
Query: 420 GSFMPPGPPNGTHKPGLHTAGYPMPRVLIPPYHGVP--QPYAIP 545
GS++PPGPPNGTHKPG+H AGYP+PRV +PP+HG P QPYAIP
Sbjct: 975 GSYIPPGPPNGTHKPGVHPAGYPVPRVPLPPFHGGPQSQPYAIP 1018
>XP_014520729.1 PREDICTED: regulator of nonsense transcripts 1 homolog [Vigna radiata
var. radiata]
Length = 1268
Score = 79.7 bits (195), Expect = 4e-14
Identities = 33/44 (75%), Positives = 39/44 (88%), Gaps = 2/44 (4%)
Frame = +3
Query: 420 GSFMPPGPPNGTHKPGLHTAGYPMPRVLIPPYHGVP--QPYAIP 545
GS++PPGPPNGTHKPG+H AGYP+PRV +PP+HG P QPYAIP
Sbjct: 975 GSYIPPGPPNGTHKPGVHPAGYPVPRVPLPPFHGGPQSQPYAIP 1018
>XP_007156615.1 hypothetical protein PHAVU_002G003300g [Phaseolus vulgaris]
ESW28609.1 hypothetical protein PHAVU_002G003300g
[Phaseolus vulgaris]
Length = 1268
Score = 79.7 bits (195), Expect = 4e-14
Identities = 33/44 (75%), Positives = 39/44 (88%), Gaps = 2/44 (4%)
Frame = +3
Query: 420 GSFMPPGPPNGTHKPGLHTAGYPMPRVLIPPYHGVP--QPYAIP 545
GS++PPGPPNGTHKPG+H AGYP+PRV +PP+HG P QPYAIP
Sbjct: 975 GSYIPPGPPNGTHKPGVHPAGYPVPRVPLPPFHGGPQSQPYAIP 1018
>KOM44874.1 hypothetical protein LR48_Vigan06g018000 [Vigna angularis]
Length = 1294
Score = 79.7 bits (195), Expect = 4e-14
Identities = 33/44 (75%), Positives = 39/44 (88%), Gaps = 2/44 (4%)
Frame = +3
Query: 420 GSFMPPGPPNGTHKPGLHTAGYPMPRVLIPPYHGVP--QPYAIP 545
GS++PPGPPNGTHKPG+H AGYP+PRV +PP+HG P QPYAIP
Sbjct: 1001 GSYIPPGPPNGTHKPGVHPAGYPVPRVPLPPFHGGPQSQPYAIP 1044
>ABK96558.1 unknown [Populus trichocarpa x Populus deltoides]
Length = 582
Score = 79.0 bits (193), Expect = 7e-14
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 2/44 (4%)
Frame = +3
Query: 420 GSFMPPGPPNGTHKPGLHTAGYPMPRVLIPPYHGVP--QPYAIP 545
GS+MPP PPNGTHKPG H AG+PMPRV IPP+HG P QPYAIP
Sbjct: 288 GSYMPPAPPNGTHKPGAHPAGFPMPRVPIPPFHGDPPSQPYAIP 331
>XP_006368472.1 RNA helicase family protein [Populus trichocarpa] ERP65041.1 RNA
helicase family protein [Populus trichocarpa]
Length = 1256
Score = 79.0 bits (193), Expect = 8e-14
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 2/44 (4%)
Frame = +3
Query: 420 GSFMPPGPPNGTHKPGLHTAGYPMPRVLIPPYHGVP--QPYAIP 545
GS+MPP PPNGTHKPG H AG+PMPRV IPP+HG P QPYAIP
Sbjct: 962 GSYMPPAPPNGTHKPGAHPAGFPMPRVPIPPFHGDPPSQPYAIP 1005
>XP_011018658.1 PREDICTED: regulator of nonsense transcripts 1 homolog [Populus
euphratica]
Length = 1266
Score = 79.0 bits (193), Expect = 8e-14
Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 2/44 (4%)
Frame = +3
Query: 420 GSFMPPGPPNGTHKPGLHTAGYPMPRVLIPPYHGVP--QPYAIP 545
GS+MPP PPNGTHKPG H AG+PMPRV IPP+HG P QPYAIP
Sbjct: 971 GSYMPPAPPNGTHKPGAHPAGFPMPRVPIPPFHGDPPSQPYAIP 1014
>XP_015872266.1 PREDICTED: regulator of nonsense transcripts 1 homolog [Ziziphus
jujuba]
Length = 345
Score = 77.8 bits (190), Expect = 1e-13
Identities = 33/44 (75%), Positives = 37/44 (84%), Gaps = 2/44 (4%)
Frame = +3
Query: 420 GSFMPPGPPNGTHKPGLHTAGYPMPRVLIPPYHGVP--QPYAIP 545
GS++PPGPPNGTHKPG+H GYPMPRV I P+HG P QPYAIP
Sbjct: 49 GSYLPPGPPNGTHKPGVHPGGYPMPRVPITPFHGGPPSQPYAIP 92
>XP_002279304.2 PREDICTED: regulator of nonsense transcripts 1 homolog isoform X2
[Vitis vinifera] CBI33955.3 unnamed protein product,
partial [Vitis vinifera]
Length = 1267
Score = 78.2 bits (191), Expect = 1e-13
Identities = 33/44 (75%), Positives = 38/44 (86%), Gaps = 2/44 (4%)
Frame = +3
Query: 420 GSFMPPGPPNGTHKPGLHTAGYPMPRVLIPPYHGVP--QPYAIP 545
GS+MP GPPNGTHKPG+H AG+PMPRV +PP+HG P QPYAIP
Sbjct: 963 GSYMPSGPPNGTHKPGVHPAGFPMPRVPLPPFHGGPPSQPYAIP 1006
>XP_010664057.1 PREDICTED: regulator of nonsense transcripts 1 homolog isoform X1
[Vitis vinifera]
Length = 1272
Score = 78.2 bits (191), Expect = 1e-13
Identities = 33/44 (75%), Positives = 38/44 (86%), Gaps = 2/44 (4%)
Frame = +3
Query: 420 GSFMPPGPPNGTHKPGLHTAGYPMPRVLIPPYHGVP--QPYAIP 545
GS+MP GPPNGTHKPG+H AG+PMPRV +PP+HG P QPYAIP
Sbjct: 963 GSYMPSGPPNGTHKPGVHPAGFPMPRVPLPPFHGGPPSQPYAIP 1006
>XP_002528794.1 PREDICTED: regulator of nonsense transcripts 1 homolog [Ricinus
communis] EEF33616.1 nonsense-mediated mRNA decay
protein, putative [Ricinus communis]
Length = 1280
Score = 77.8 bits (190), Expect = 2e-13
Identities = 32/44 (72%), Positives = 37/44 (84%), Gaps = 2/44 (4%)
Frame = +3
Query: 420 GSFMPPGPPNGTHKPGLHTAGYPMPRVLIPPYHGVP--QPYAIP 545
GS+MPPGPPNGTHKP +H G+PMPRV +PP+HG P QPYAIP
Sbjct: 985 GSYMPPGPPNGTHKPSVHPTGFPMPRVPVPPFHGGPPSQPYAIP 1028