BLASTX nr result

ID: Panax24_contig00006009 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00006009
         (381 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017214984.1 PREDICTED: splicing factor U2AF-associated protei...    81   2e-15
XP_010673867.1 PREDICTED: splicing factor U2AF-associated protei...    75   2e-13
XP_010673865.1 PREDICTED: splicing factor U2AF-associated protei...    75   2e-13
CBI18792.3 unnamed protein product, partial [Vitis vinifera]           73   2e-12
XP_019074088.1 PREDICTED: HIV Tat-specific factor 1 [Vitis vinif...    73   2e-12
XP_003635108.2 PREDICTED: HIV Tat-specific factor 1 [Vitis vinif...    71   6e-12
XP_010109946.1 HIV Tat-specific factor 1-like protein [Morus not...    71   6e-12
XP_010034896.1 PREDICTED: uncharacterized protein LOC104424231 [...    68   8e-12
XP_008442163.1 PREDICTED: splicing factor U2AF-associated protei...    70   1e-11
XP_008389046.1 PREDICTED: uncharacterized protein LOC103451422 [...    69   2e-11
XP_009361561.1 PREDICTED: splicing factor U2AF-associated protei...    69   3e-11
XP_009361560.1 PREDICTED: splicing factor U2AF-associated protei...    69   3e-11
XP_009361559.1 PREDICTED: splicing factor U2AF-associated protei...    69   3e-11
XP_006858794.1 PREDICTED: splicing factor U2AF-associated protei...    69   4e-11
XP_004495534.1 PREDICTED: splicing factor U2AF-associated protei...    69   4e-11
XP_011653887.1 PREDICTED: splicing factor U2AF-associated protei...    69   5e-11
KGN54773.1 hypothetical protein Csa_4G491190 [Cucumis sativus]         69   5e-11
KNA15975.1 hypothetical protein SOVF_093470 [Spinacia oleracea]        69   5e-11
XP_012569991.1 PREDICTED: splicing factor U2AF-associated protei...    69   5e-11
JAT42234.1 HIV Tat-specific factor 1 [Anthurium amnicola]              68   6e-11

>XP_017214984.1 PREDICTED: splicing factor U2AF-associated protein 2 [Daucus carota
           subsp. sativus] KZM89385.1 hypothetical protein
           DCAR_023252 [Daucus carota subsp. sativus]
          Length = 491

 Score = 80.9 bits (198), Expect = 2e-15
 Identities = 38/63 (60%), Positives = 44/63 (69%)
 Frame = +3

Query: 3   WKKEVTNIXXXXXXXXXMLKKDFNIQADDLERPSTPPDGEEEFTNDDGTTYKWVRGIRVW 182
           W+KEV  +         MLK D +   DD ERPSTPPDGEEEFT+DDGTTYKW RG+R W
Sbjct: 110 WQKEV--MEAEAQAQAEMLKADSSKLDDDAERPSTPPDGEEEFTDDDGTTYKWDRGLRAW 167

Query: 183 IPQ 191
           +PQ
Sbjct: 168 VPQ 170


>XP_010673867.1 PREDICTED: splicing factor U2AF-associated protein 2 isoform X2
           [Beta vulgaris subsp. vulgaris]
          Length = 400

 Score = 75.5 bits (184), Expect = 2e-13
 Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
 Frame = +3

Query: 3   WKKEVTNIXXXXXXXXXMLKKDF-NIQADDLERPSTPPDGEEEFTNDDGTTYKWVRGIRV 179
           W+KEV            MLK D  N+   D ERPSTPP+GEEEFT+DDGTTYKW RG+R 
Sbjct: 17  WQKEVKEAEAEAE----MLKYDSGNVDGVDPERPSTPPEGEEEFTDDDGTTYKWNRGLRA 72

Query: 180 WIPQ 191
           W+PQ
Sbjct: 73  WVPQ 76


>XP_010673865.1 PREDICTED: splicing factor U2AF-associated protein 2 isoform X1
           [Beta vulgaris subsp. vulgaris] KMT14698.1 hypothetical
           protein BVRB_4g074650 [Beta vulgaris subsp. vulgaris]
          Length = 485

 Score = 75.5 bits (184), Expect = 2e-13
 Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
 Frame = +3

Query: 3   WKKEVTNIXXXXXXXXXMLKKDF-NIQADDLERPSTPPDGEEEFTNDDGTTYKWVRGIRV 179
           W+KEV            MLK D  N+   D ERPSTPP+GEEEFT+DDGTTYKW RG+R 
Sbjct: 102 WQKEVKEAEAEAE----MLKYDSGNVDGVDPERPSTPPEGEEEFTDDDGTTYKWNRGLRA 157

Query: 180 WIPQ 191
           W+PQ
Sbjct: 158 WVPQ 161


>CBI18792.3 unnamed protein product, partial [Vitis vinifera]
          Length = 486

 Score = 72.8 bits (177), Expect = 2e-12
 Identities = 29/37 (78%), Positives = 34/37 (91%)
 Frame = +3

Query: 84  DDLERPSTPPDGEEEFTNDDGTTYKWVRGIRVWIPQV 194
           +D ERPSTPPDGE+EFT+DDGTTYKW RG+R W+PQV
Sbjct: 131 EDNERPSTPPDGEDEFTDDDGTTYKWDRGLRAWVPQV 167


>XP_019074088.1 PREDICTED: HIV Tat-specific factor 1 [Vitis vinifera]
          Length = 487

 Score = 72.8 bits (177), Expect = 2e-12
 Identities = 29/37 (78%), Positives = 34/37 (91%)
 Frame = +3

Query: 84  DDLERPSTPPDGEEEFTNDDGTTYKWVRGIRVWIPQV 194
           +D ERPSTPPDGE+EFT+DDGTTYKW RG+R W+PQV
Sbjct: 131 EDNERPSTPPDGEDEFTDDDGTTYKWDRGLRAWVPQV 167


>XP_003635108.2 PREDICTED: HIV Tat-specific factor 1 [Vitis vinifera]
          Length = 488

 Score = 71.2 bits (173), Expect = 6e-12
 Identities = 28/36 (77%), Positives = 33/36 (91%)
 Frame = +3

Query: 84  DDLERPSTPPDGEEEFTNDDGTTYKWVRGIRVWIPQ 191
           +D ERPSTPPDGE+EFT+DDGTTYKW RG+R W+PQ
Sbjct: 131 EDNERPSTPPDGEDEFTDDDGTTYKWDRGLRAWVPQ 166


>XP_010109946.1 HIV Tat-specific factor 1-like protein [Morus notabilis] EXC24922.1
           HIV Tat-specific factor 1-like protein [Morus notabilis]
          Length = 497

 Score = 71.2 bits (173), Expect = 6e-12
 Identities = 28/36 (77%), Positives = 33/36 (91%)
 Frame = +3

Query: 84  DDLERPSTPPDGEEEFTNDDGTTYKWVRGIRVWIPQ 191
           DD +RPSTPP+GEEEFT+DDGTTYKW RG+R W+PQ
Sbjct: 137 DDNDRPSTPPEGEEEFTDDDGTTYKWDRGLRAWVPQ 172


>XP_010034896.1 PREDICTED: uncharacterized protein LOC104424231 [Eucalyptus
           grandis]
          Length = 152

 Score = 67.8 bits (164), Expect = 8e-12
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = +3

Query: 84  DDLERPSTPPDGEEEFTNDDGTTYKWVRGIRVWIPQV 194
           DDL RPSTPP+GEEEF +DDGT YKW RG+R W PQV
Sbjct: 104 DDLIRPSTPPEGEEEFVDDDGTRYKWDRGLRAWAPQV 140


>XP_008442163.1 PREDICTED: splicing factor U2AF-associated protein 2 [Cucumis melo]
          Length = 498

 Score = 70.5 bits (171), Expect = 1e-11
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = +3

Query: 63  KDFNIQADDLERPSTPPDGEEEFTNDDGTTYKWVRGIRVWIPQ 191
           ++F +   DLERP+TPP+GEEEFT+DDGTTYKW R +R W+PQ
Sbjct: 115 RNFGMVEGDLERPTTPPEGEEEFTDDDGTTYKWDRVLRAWVPQ 157


>XP_008389046.1 PREDICTED: uncharacterized protein LOC103451422 [Malus domestica]
          Length = 300

 Score = 69.3 bits (168), Expect = 2e-11
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = +3

Query: 87  DLERPSTPPDGEEEFTNDDGTTYKWVRGIRVWIPQ 191
           D +RPSTPP+GEEEFT+DDGTTYKW RG+R W+PQ
Sbjct: 143 DSDRPSTPPEGEEEFTDDDGTTYKWDRGLRAWVPQ 177


>XP_009361561.1 PREDICTED: splicing factor U2AF-associated protein 2 isoform X3
           [Pyrus x bretschneideri]
          Length = 512

 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = +3

Query: 87  DLERPSTPPDGEEEFTNDDGTTYKWVRGIRVWIPQ 191
           D +RPSTPP+GEEEFT+DDGTTYKW RG+R W+PQ
Sbjct: 148 DSDRPSTPPEGEEEFTDDDGTTYKWDRGLRAWVPQ 182


>XP_009361560.1 PREDICTED: splicing factor U2AF-associated protein 2 isoform X2
           [Pyrus x bretschneideri]
          Length = 525

 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = +3

Query: 87  DLERPSTPPDGEEEFTNDDGTTYKWVRGIRVWIPQ 191
           D +RPSTPP+GEEEFT+DDGTTYKW RG+R W+PQ
Sbjct: 146 DSDRPSTPPEGEEEFTDDDGTTYKWDRGLRAWVPQ 180


>XP_009361559.1 PREDICTED: splicing factor U2AF-associated protein 2 isoform X1
           [Pyrus x bretschneideri]
          Length = 527

 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = +3

Query: 87  DLERPSTPPDGEEEFTNDDGTTYKWVRGIRVWIPQ 191
           D +RPSTPP+GEEEFT+DDGTTYKW RG+R W+PQ
Sbjct: 148 DSDRPSTPPEGEEEFTDDDGTTYKWDRGLRAWVPQ 182


>XP_006858794.1 PREDICTED: splicing factor U2AF-associated protein 2 [Amborella
           trichopoda] ERN20261.1 hypothetical protein
           AMTR_s00066p00163770 [Amborella trichopoda]
          Length = 506

 Score = 68.9 bits (167), Expect = 4e-11
 Identities = 32/63 (50%), Positives = 40/63 (63%)
 Frame = +3

Query: 3   WKKEVTNIXXXXXXXXXMLKKDFNIQADDLERPSTPPDGEEEFTNDDGTTYKWVRGIRVW 182
           WKKEV             LK+D  +     +RPS+PPDGE+EFT+DDGTTYKW R +R W
Sbjct: 116 WKKEVAEAEAEAEN----LKEDPFVAGGADDRPSSPPDGEDEFTDDDGTTYKWDRSLRAW 171

Query: 183 IPQ 191
           +PQ
Sbjct: 172 VPQ 174


>XP_004495534.1 PREDICTED: splicing factor U2AF-associated protein 2 isoform X1
           [Cicer arietinum]
          Length = 577

 Score = 68.9 bits (167), Expect = 4e-11
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = +3

Query: 84  DDLERPSTPPDGEEEFTNDDGTTYKWVRGIRVWIPQ 191
           +D ERPSTPPDGEEEFT+DDGT YKW R IR W+PQ
Sbjct: 206 EDSERPSTPPDGEEEFTDDDGTKYKWDRNIRAWVPQ 241



 Score = 68.6 bits (166), Expect = 5e-11
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = +3

Query: 84  DDLERPSTPPDGEEEFTNDDGTTYKWVRGIRVWIPQ 191
           +D ERPSTPPDGEEEFT+DDGT YKW R IR W+PQ
Sbjct: 143 EDPERPSTPPDGEEEFTDDDGTKYKWDRNIRAWVPQ 178


>XP_011653887.1 PREDICTED: splicing factor U2AF-associated protein 2 [Cucumis
           sativus] XP_011653888.1 PREDICTED: splicing factor
           U2AF-associated protein 2 [Cucumis sativus]
          Length = 498

 Score = 68.6 bits (166), Expect = 5e-11
 Identities = 27/43 (62%), Positives = 35/43 (81%)
 Frame = +3

Query: 63  KDFNIQADDLERPSTPPDGEEEFTNDDGTTYKWVRGIRVWIPQ 191
           ++F +   DLERP+TPP+GEEEFT+DDGT YKW R +R W+PQ
Sbjct: 115 RNFGLVEGDLERPTTPPEGEEEFTDDDGTPYKWDRVLRAWVPQ 157


>KGN54773.1 hypothetical protein Csa_4G491190 [Cucumis sativus]
          Length = 500

 Score = 68.6 bits (166), Expect = 5e-11
 Identities = 27/43 (62%), Positives = 35/43 (81%)
 Frame = +3

Query: 63  KDFNIQADDLERPSTPPDGEEEFTNDDGTTYKWVRGIRVWIPQ 191
           ++F +   DLERP+TPP+GEEEFT+DDGT YKW R +R W+PQ
Sbjct: 117 RNFGLVEGDLERPTTPPEGEEEFTDDDGTPYKWDRVLRAWVPQ 159


>KNA15975.1 hypothetical protein SOVF_093470 [Spinacia oleracea]
          Length = 505

 Score = 68.6 bits (166), Expect = 5e-11
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = +3

Query: 72  NIQADDLERPSTPPDGEEEFTNDDGTTYKWVRGIRVWIPQ 191
           ++   + ERPSTPPDGEEEFT+DDGTTYKW R +R W+PQ
Sbjct: 141 DVDGVEQERPSTPPDGEEEFTDDDGTTYKWDRSLRAWVPQ 180


>XP_012569991.1 PREDICTED: splicing factor U2AF-associated protein 2 isoform X2
           [Cicer arietinum]
          Length = 514

 Score = 68.6 bits (166), Expect = 5e-11
 Identities = 28/36 (77%), Positives = 31/36 (86%)
 Frame = +3

Query: 84  DDLERPSTPPDGEEEFTNDDGTTYKWVRGIRVWIPQ 191
           +D ERPSTPPDGEEEFT+DDGT YKW R IR W+PQ
Sbjct: 143 EDPERPSTPPDGEEEFTDDDGTKYKWDRNIRAWVPQ 178


>JAT42234.1 HIV Tat-specific factor 1 [Anthurium amnicola]
          Length = 395

 Score = 68.2 bits (165), Expect = 6e-11
 Identities = 26/35 (74%), Positives = 32/35 (91%)
 Frame = +3

Query: 93  ERPSTPPDGEEEFTNDDGTTYKWVRGIRVWIPQVG 197
           ERP+TPP+GE+EFT+DDGTTYKW RG+R W+PQ G
Sbjct: 104 ERPTTPPEGEQEFTDDDGTTYKWDRGLRAWVPQEG 138


Top