BLASTX nr result

ID: Panax24_contig00005936 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00005936
         (376 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006356040.1 PREDICTED: probable histone H2AXb [Solanum tubero...    82   3e-17
XP_004234016.1 PREDICTED: probable histone H2AXb [Solanum lycope...    82   3e-17
KFK39387.1 hypothetical protein AALP_AA3G238600 [Arabis alpina]        80   6e-17
XP_008363687.1 PREDICTED: histone H2AX [Malus domestica]               80   1e-16
XP_004290709.1 PREDICTED: histone H2AX [Fragaria vesca subsp. ve...    80   1e-16
XP_004302471.1 PREDICTED: probable histone H2AXb [Fragaria vesca...    80   1e-16
NP_172363.1 Histone superfamily protein [Arabidopsis thaliana] O...    80   1e-16
EPS69065.1 hypothetical protein M569_05704 [Genlisea aurea]            80   1e-16
XP_010466270.1 PREDICTED: probable histone H2A.2 [Camelina sativa]     79   2e-16
XP_010509202.1 PREDICTED: probable histone H2A.2 [Camelina sativ...    79   2e-16
XP_006296635.1 hypothetical protein CARUB_v10014905mg [Capsella ...    79   2e-16
XP_019579073.1 PREDICTED: probable histone H2A.2 [Rhinolophus si...    79   2e-16
XP_009145600.1 PREDICTED: probable histone H2A.2 [Brassica rapa]       79   2e-16
XP_013673329.1 PREDICTED: probable histone H2A.2 [Brassica napus...    79   2e-16
XP_013625239.1 PREDICTED: probable histone H2A.2 [Brassica olera...    79   2e-16
XP_006406360.1 hypothetical protein EUTSA_v10021749mg [Eutrema s...    79   2e-16
XP_013611607.1 PREDICTED: probable histone H2A.2 [Brassica olera...    79   2e-16
XP_009110281.1 PREDICTED: probable histone H2A.2 [Brassica rapa]...    79   2e-16
XP_018488693.1 PREDICTED: probable histone H2A.2 [Raphanus sativ...    79   2e-16
XP_006305729.1 hypothetical protein CARUB_v10010499mg, partial [...    80   2e-16

>XP_006356040.1 PREDICTED: probable histone H2AXb [Solanum tuberosum]
          Length = 142

 Score = 81.6 bits (200), Expect = 3e-17
 Identities = 41/46 (89%), Positives = 43/46 (93%)
 Frame = -2

Query: 138 VTRSSKAGLQFSVGRIARFLKNDKYSERVGAGAPVYLSTVLEYLAA 1
           V+RSSKAGLQF VGRIARFLKN KY+ERVGAGAPVYLS VLEYLAA
Sbjct: 23  VSRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSAVLEYLAA 68


>XP_004234016.1 PREDICTED: probable histone H2AXb [Solanum lycopersicum]
           XP_015067287.1 PREDICTED: probable histone H2AXb
           [Solanum pennellii]
          Length = 142

 Score = 81.6 bits (200), Expect = 3e-17
 Identities = 41/46 (89%), Positives = 43/46 (93%)
 Frame = -2

Query: 138 VTRSSKAGLQFSVGRIARFLKNDKYSERVGAGAPVYLSTVLEYLAA 1
           V+RSSKAGLQF VGRIARFLKN KY+ERVGAGAPVYLS VLEYLAA
Sbjct: 23  VSRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSAVLEYLAA 68


>KFK39387.1 hypothetical protein AALP_AA3G238600 [Arabis alpina]
          Length = 132

 Score = 80.5 bits (197), Expect = 6e-17
 Identities = 40/45 (88%), Positives = 42/45 (93%)
 Frame = -2

Query: 135 TRSSKAGLQFSVGRIARFLKNDKYSERVGAGAPVYLSTVLEYLAA 1
           TRSSKAGLQF VGRIARFLKN KY+ERVGAGAPVYL+ VLEYLAA
Sbjct: 18  TRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLAAVLEYLAA 62


>XP_008363687.1 PREDICTED: histone H2AX [Malus domestica]
          Length = 138

 Score = 79.7 bits (195), Expect = 1e-16
 Identities = 40/46 (86%), Positives = 43/46 (93%)
 Frame = -2

Query: 138 VTRSSKAGLQFSVGRIARFLKNDKYSERVGAGAPVYLSTVLEYLAA 1
           V+RSSKAGLQF VGRIARFLK+ KY+ERVGAGAPVYLS VLEYLAA
Sbjct: 19  VSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAA 64


>XP_004290709.1 PREDICTED: histone H2AX [Fragaria vesca subsp. vesca]
          Length = 138

 Score = 79.7 bits (195), Expect = 1e-16
 Identities = 40/46 (86%), Positives = 43/46 (93%)
 Frame = -2

Query: 138 VTRSSKAGLQFSVGRIARFLKNDKYSERVGAGAPVYLSTVLEYLAA 1
           V+RSSKAGLQF VGRIARFLK+ KY+ERVGAGAPVYLS VLEYLAA
Sbjct: 19  VSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAA 64


>XP_004302471.1 PREDICTED: probable histone H2AXb [Fragaria vesca subsp. vesca]
          Length = 141

 Score = 79.7 bits (195), Expect = 1e-16
 Identities = 40/46 (86%), Positives = 43/46 (93%)
 Frame = -2

Query: 138 VTRSSKAGLQFSVGRIARFLKNDKYSERVGAGAPVYLSTVLEYLAA 1
           V+RSSKAGLQF VGRIARFLK+ KY+ERVGAGAPVYLS VLEYLAA
Sbjct: 22  VSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAA 67


>NP_172363.1 Histone superfamily protein [Arabidopsis thaliana] O04848.1
           RecName: Full=Probable histone H2AXa; AltName: Full=HTA5
           AAL06545.1 At1g08880/F7G19_24 [Arabidopsis thaliana]
           AAB70416.1 Strong similarity to Picea histone H2A
           (gb|X67819). ESTs gb|ATTS3874,gb|T46627,gb|T14194 come
           from this gene [Arabidopsis thaliana] AAM16236.1
           At1g08880/F7G19_24 [Arabidopsis thaliana] AEE28361.1
           Histone superfamily protein [Arabidopsis thaliana]
           OAP14486.1 HTA5 [Arabidopsis thaliana]
          Length = 142

 Score = 79.7 bits (195), Expect = 1e-16
 Identities = 40/46 (86%), Positives = 43/46 (93%)
 Frame = -2

Query: 138 VTRSSKAGLQFSVGRIARFLKNDKYSERVGAGAPVYLSTVLEYLAA 1
           V+RSSKAGLQF VGRIARFLK+ KY+ERVGAGAPVYLS VLEYLAA
Sbjct: 23  VSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAA 68


>EPS69065.1 hypothetical protein M569_05704 [Genlisea aurea]
          Length = 142

 Score = 79.7 bits (195), Expect = 1e-16
 Identities = 41/46 (89%), Positives = 42/46 (91%)
 Frame = -2

Query: 138 VTRSSKAGLQFSVGRIARFLKNDKYSERVGAGAPVYLSTVLEYLAA 1
           V+RSSKAGLQF VGRIARFLK  KYSERVGAGAPVYLS VLEYLAA
Sbjct: 23  VSRSSKAGLQFPVGRIARFLKAGKYSERVGAGAPVYLSAVLEYLAA 68


>XP_010466270.1 PREDICTED: probable histone H2A.2 [Camelina sativa]
          Length = 132

 Score = 79.0 bits (193), Expect = 2e-16
 Identities = 39/45 (86%), Positives = 42/45 (93%)
 Frame = -2

Query: 135 TRSSKAGLQFSVGRIARFLKNDKYSERVGAGAPVYLSTVLEYLAA 1
           +RSSKAGLQF VGRIARFLKN KY+ERVGAGAPVYL+ VLEYLAA
Sbjct: 18  SRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLAAVLEYLAA 62


>XP_010509202.1 PREDICTED: probable histone H2A.2 [Camelina sativa] XP_010488056.1
           PREDICTED: probable histone H2A.2 [Camelina sativa]
          Length = 132

 Score = 79.0 bits (193), Expect = 2e-16
 Identities = 39/45 (86%), Positives = 42/45 (93%)
 Frame = -2

Query: 135 TRSSKAGLQFSVGRIARFLKNDKYSERVGAGAPVYLSTVLEYLAA 1
           +RSSKAGLQF VGRIARFLKN KY+ERVGAGAPVYL+ VLEYLAA
Sbjct: 18  SRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLAAVLEYLAA 62


>XP_006296635.1 hypothetical protein CARUB_v10014905mg [Capsella rubella]
           EOA29533.1 hypothetical protein CARUB_v10014905mg
           [Capsella rubella]
          Length = 132

 Score = 79.0 bits (193), Expect = 2e-16
 Identities = 39/45 (86%), Positives = 42/45 (93%)
 Frame = -2

Query: 135 TRSSKAGLQFSVGRIARFLKNDKYSERVGAGAPVYLSTVLEYLAA 1
           +RSSKAGLQF VGRIARFLKN KY+ERVGAGAPVYL+ VLEYLAA
Sbjct: 18  SRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLAAVLEYLAA 62


>XP_019579073.1 PREDICTED: probable histone H2A.2 [Rhinolophus sinicus]
          Length = 133

 Score = 79.0 bits (193), Expect = 2e-16
 Identities = 39/45 (86%), Positives = 42/45 (93%)
 Frame = -2

Query: 135 TRSSKAGLQFSVGRIARFLKNDKYSERVGAGAPVYLSTVLEYLAA 1
           +RSSKAGLQF VGRIARFLKN KY+ERVGAGAPVYL+ VLEYLAA
Sbjct: 18  SRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLAAVLEYLAA 62


>XP_009145600.1 PREDICTED: probable histone H2A.2 [Brassica rapa]
          Length = 133

 Score = 79.0 bits (193), Expect = 2e-16
 Identities = 39/45 (86%), Positives = 42/45 (93%)
 Frame = -2

Query: 135 TRSSKAGLQFSVGRIARFLKNDKYSERVGAGAPVYLSTVLEYLAA 1
           +RSSKAGLQF VGRIARFLKN KY+ERVGAGAPVYL+ VLEYLAA
Sbjct: 18  SRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLAAVLEYLAA 62


>XP_013673329.1 PREDICTED: probable histone H2A.2 [Brassica napus] CDY29453.1
           BnaC05g32170D [Brassica napus]
          Length = 133

 Score = 79.0 bits (193), Expect = 2e-16
 Identities = 39/45 (86%), Positives = 42/45 (93%)
 Frame = -2

Query: 135 TRSSKAGLQFSVGRIARFLKNDKYSERVGAGAPVYLSTVLEYLAA 1
           +RSSKAGLQF VGRIARFLKN KY+ERVGAGAPVYL+ VLEYLAA
Sbjct: 18  SRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLAAVLEYLAA 62


>XP_013625239.1 PREDICTED: probable histone H2A.2 [Brassica oleracea var. oleracea]
           XP_013583993.1 PREDICTED: probable histone H2A.2
           [Brassica oleracea var. oleracea] XP_013749283.1
           PREDICTED: probable histone H2A.2 [Brassica napus]
           XP_013685019.1 PREDICTED: probable histone H2A.2
           [Brassica napus] XP_018491363.1 PREDICTED: probable
           histone H2A.2 [Raphanus sativus] CDY32388.1
           BnaC03g41720D [Brassica napus] CDY19616.1 BnaA05g20240D
           [Brassica napus]
          Length = 133

 Score = 79.0 bits (193), Expect = 2e-16
 Identities = 39/45 (86%), Positives = 42/45 (93%)
 Frame = -2

Query: 135 TRSSKAGLQFSVGRIARFLKNDKYSERVGAGAPVYLSTVLEYLAA 1
           +RSSKAGLQF VGRIARFLKN KY+ERVGAGAPVYL+ VLEYLAA
Sbjct: 18  SRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLAAVLEYLAA 62


>XP_006406360.1 hypothetical protein EUTSA_v10021749mg [Eutrema salsugineum]
           ESQ47813.1 hypothetical protein EUTSA_v10021749mg
           [Eutrema salsugineum]
          Length = 133

 Score = 79.0 bits (193), Expect = 2e-16
 Identities = 39/45 (86%), Positives = 42/45 (93%)
 Frame = -2

Query: 135 TRSSKAGLQFSVGRIARFLKNDKYSERVGAGAPVYLSTVLEYLAA 1
           +RSSKAGLQF VGRIARFLKN KY+ERVGAGAPVYL+ VLEYLAA
Sbjct: 18  SRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLAAVLEYLAA 62


>XP_013611607.1 PREDICTED: probable histone H2A.2 [Brassica oleracea var. oleracea]
           XP_013678561.1 PREDICTED: probable histone H2A.2
           [Brassica napus] XP_013693675.1 PREDICTED: probable
           histone H2A.2 [Brassica napus] CDY43067.1 BnaCnng10730D
           [Brassica napus]
          Length = 134

 Score = 79.0 bits (193), Expect = 2e-16
 Identities = 39/45 (86%), Positives = 42/45 (93%)
 Frame = -2

Query: 135 TRSSKAGLQFSVGRIARFLKNDKYSERVGAGAPVYLSTVLEYLAA 1
           +RSSKAGLQF VGRIARFLKN KY+ERVGAGAPVYL+ VLEYLAA
Sbjct: 18  SRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLAAVLEYLAA 62


>XP_009110281.1 PREDICTED: probable histone H2A.2 [Brassica rapa] XP_013640686.1
           PREDICTED: probable histone H2A.2 [Brassica napus]
           XP_018435081.1 PREDICTED: probable histone H2A.2
           [Raphanus sativus] XP_018437054.1 PREDICTED: probable
           histone H2A.2 [Raphanus sativus] CDY53617.1
           BnaA01g25600D [Brassica napus]
          Length = 134

 Score = 79.0 bits (193), Expect = 2e-16
 Identities = 39/45 (86%), Positives = 42/45 (93%)
 Frame = -2

Query: 135 TRSSKAGLQFSVGRIARFLKNDKYSERVGAGAPVYLSTVLEYLAA 1
           +RSSKAGLQF VGRIARFLKN KY+ERVGAGAPVYL+ VLEYLAA
Sbjct: 18  SRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLAAVLEYLAA 62


>XP_018488693.1 PREDICTED: probable histone H2A.2 [Raphanus sativus] XP_018491895.1
           PREDICTED: probable histone H2A.2 [Raphanus sativus]
          Length = 135

 Score = 79.0 bits (193), Expect = 2e-16
 Identities = 39/45 (86%), Positives = 42/45 (93%)
 Frame = -2

Query: 135 TRSSKAGLQFSVGRIARFLKNDKYSERVGAGAPVYLSTVLEYLAA 1
           +RSSKAGLQF VGRIARFLKN KY+ERVGAGAPVYL+ VLEYLAA
Sbjct: 18  SRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLAAVLEYLAA 62


>XP_006305729.1 hypothetical protein CARUB_v10010499mg, partial [Capsella rubella]
           EOA38627.1 hypothetical protein CARUB_v10010499mg,
           partial [Capsella rubella]
          Length = 164

 Score = 79.7 bits (195), Expect = 2e-16
 Identities = 40/46 (86%), Positives = 43/46 (93%)
 Frame = -2

Query: 138 VTRSSKAGLQFSVGRIARFLKNDKYSERVGAGAPVYLSTVLEYLAA 1
           V+RSSKAGLQF VGRIARFLK+ KY+ERVGAGAPVYLS VLEYLAA
Sbjct: 45  VSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAA 90


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