BLASTX nr result

ID: Panax24_contig00005252 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00005252
         (417 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM84594.1 hypothetical protein DCAR_027984 [Daucus carota subsp...    57   1e-06
XP_017223371.1 PREDICTED: uncharacterized protein LOC108199875 i...    57   1e-06
XP_017223367.1 PREDICTED: uncharacterized protein LOC108199875 i...    57   1e-06

>KZM84594.1 hypothetical protein DCAR_027984 [Daucus carota subsp. sativus]
          Length = 573

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 38/87 (43%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
 Frame = -3

Query: 259 METCCYXXXXXXXXXXXXILNFQGVSLSADRRI-CRTASVPRSHSCLLTKPFLQISNNFQ 83
           M+ CC+             LNFQG S SA+RR  CRTAS P+     L  PFLQ  NNFQ
Sbjct: 1   MDGCCFAAITSSSATI---LNFQGGSFSANRRYNCRTASGPQVQCSSLANPFLQQKNNFQ 57

Query: 82  PLIXXXXXXXXXXXXYKGTISSEAEKK 2
             I            YKG IS+EA+KK
Sbjct: 58  SPILRQSSSCLTLRSYKGIISAEADKK 84


>XP_017223371.1 PREDICTED: uncharacterized protein LOC108199875 isoform X3 [Daucus
           carota subsp. sativus]
          Length = 576

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 38/87 (43%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
 Frame = -3

Query: 259 METCCYXXXXXXXXXXXXILNFQGVSLSADRRI-CRTASVPRSHSCLLTKPFLQISNNFQ 83
           M+ CC+             LNFQG S SA+RR  CRTAS P+     L  PFLQ  NNFQ
Sbjct: 1   MDGCCFAAITSSSATI---LNFQGGSFSANRRYNCRTASGPQVQCSSLANPFLQQKNNFQ 57

Query: 82  PLIXXXXXXXXXXXXYKGTISSEAEKK 2
             I            YKG IS+EA+KK
Sbjct: 58  SPILRQSSSCLTLRSYKGIISAEADKK 84


>XP_017223367.1 PREDICTED: uncharacterized protein LOC108199875 isoform X1 [Daucus
           carota subsp. sativus] XP_017223368.1 PREDICTED:
           uncharacterized protein LOC108199875 isoform X1 [Daucus
           carota subsp. sativus] XP_017223369.1 PREDICTED:
           uncharacterized protein LOC108199875 isoform X1 [Daucus
           carota subsp. sativus] XP_017223370.1 PREDICTED:
           uncharacterized protein LOC108199875 isoform X2 [Daucus
           carota subsp. sativus]
          Length = 603

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 38/87 (43%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
 Frame = -3

Query: 259 METCCYXXXXXXXXXXXXILNFQGVSLSADRRI-CRTASVPRSHSCLLTKPFLQISNNFQ 83
           M+ CC+             LNFQG S SA+RR  CRTAS P+     L  PFLQ  NNFQ
Sbjct: 1   MDGCCFAAITSSSATI---LNFQGGSFSANRRYNCRTASGPQVQCSSLANPFLQQKNNFQ 57

Query: 82  PLIXXXXXXXXXXXXYKGTISSEAEKK 2
             I            YKG IS+EA+KK
Sbjct: 58  SPILRQSSSCLTLRSYKGIISAEADKK 84


Top