BLASTX nr result

ID: Panax24_contig00005206 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00005206
         (840 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZN01073.1 hypothetical protein DCAR_009827 [Daucus carota subsp...    65   2e-09
KZM90594.1 hypothetical protein DCAR_022041 [Daucus carota subsp...    54   1e-06
KZM94154.1 hypothetical protein DCAR_017399 [Daucus carota subsp...    54   3e-06

>KZN01073.1 hypothetical protein DCAR_009827 [Daucus carota subsp. sativus]
          Length = 140

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 27/33 (81%), Positives = 28/33 (84%)
 Frame = +3

Query: 180 IVCDCGIVAPMWEAWKDGTLDLGRRFVGCSKYK 278
           I C CGIVAP WEAWKDGTLD GRRF GCS+YK
Sbjct: 17  IKCRCGIVAPCWEAWKDGTLDPGRRFYGCSRYK 49


>KZM90594.1 hypothetical protein DCAR_022041 [Daucus carota subsp. sativus]
          Length = 837

 Score = 53.5 bits (127), Expect(2) = 1e-06
 Identities = 29/75 (38%), Positives = 43/75 (57%)
 Frame = +3

Query: 54  QESNT*VELEKMSTSSGVESSYRRKIVSKCADSERDSVKFNPIVCDCGIVAPMWEAWKDG 233
           Q S+  +  +  S+SS    +  R   S   +S  D   ++ + C C I+AP+ EAW++G
Sbjct: 412 QPSSMSISSKSSSSSSPSVQNSMRSYGSNRNNSGFDC-GYSHLKCKCDILAPLQEAWREG 470

Query: 234 TLDLGRRFVGCSKYK 278
           T+D GRRF GCS YK
Sbjct: 471 TMDPGRRFFGCSNYK 485



 Score = 27.7 bits (60), Expect(2) = 1e-06
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +2

Query: 368 QDPKKMYCRFFKWCDHPFTKR*GK**KKLRDELYSANREIRRLK 499
           +DP K  C FF W D P++ R      +LR ++   + E++++K
Sbjct: 485 KDPTKK-CNFFLWADPPYSDRARDIIHQLRFKMRVKDAELQKMK 527



 Score = 53.1 bits (126), Expect(2) = 1e-06
 Identities = 20/36 (55%), Positives = 28/36 (77%)
 Frame = +3

Query: 171 FNPIVCDCGIVAPMWEAWKDGTLDLGRRFVGCSKYK 278
           ++ + C C I+AP+ EAW++GT+D GRRF GCS YK
Sbjct: 35  YSHLKCKCDILAPLQEAWREGTMDPGRRFFGCSNYK 70



 Score = 27.7 bits (60), Expect(2) = 1e-06
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = +2

Query: 368 QDPKKMYCRFFKWCDHPFTKR*GK**KKLRDELYSANREIRRLK 499
           +DP K  C FF W D P++ R      +LR ++   + E++++K
Sbjct: 70  KDPTKK-CNFFLWADPPYSDRARDIIHQLRFKMRVKDAELQKMK 112


>KZM94154.1 hypothetical protein DCAR_017399 [Daucus carota subsp. sativus]
          Length = 173

 Score = 53.9 bits (128), Expect(2) = 3e-06
 Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
 Frame = +3

Query: 81  EKMSTSSGVESSYRRKIVS--KCADSERDSVKFNPIVCDCGIVAPMWEAWKDGTLDLGRR 254
           E  S+S    SS R   VS  K  +SE     F  + C C + AP   AWK+GTL+ GRR
Sbjct: 5   ESSSSSRKTSSSIRNSYVSDVKSGNSEHP---FIGVKCKCDLPAPCQVAWKEGTLNPGRR 61

Query: 255 FVGCSKYK 278
           F GCS+YK
Sbjct: 62  FFGCSRYK 69



 Score = 25.8 bits (55), Expect(2) = 3e-06
 Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 22/98 (22%)
 Frame = +2

Query: 368 QDPKKMYCRFFKWCDHPFTKR*GK**KKLR-------DELYSA--------------NRE 484
           +DP K  C FF W D  F  R     K+L+       DEL +A              N E
Sbjct: 69  KDPNKK-CDFFLWADPSFPDRARDVIKELKMKLKRKDDELCNAKLEMNFVERKMLVPNEE 127

Query: 485 IRRL-KFLENGSESIVVKELKRENAQKSKTLTTMWIVV 595
           +  L K LE  SE  V+K  ++E    S  L   ++VV
Sbjct: 128 VTALRKKLEETSE--VLKNREKEGCNWSSALFFSFVVV 163


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