BLASTX nr result

ID: Panax24_contig00004831 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00004831
         (575 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CBI30264.3 unnamed protein product, partial [Vitis vinifera]           86   2e-16
XP_010654342.1 PREDICTED: transcription initiation factor TFIID ...    86   3e-16
XP_008462670.1 PREDICTED: transcription initiation factor TFIID ...    79   6e-14
XP_011657695.1 PREDICTED: transcription initiation factor TFIID ...    78   2e-13
XP_011657696.1 PREDICTED: transcription initiation factor TFIID ...    77   4e-13
KVH90342.1 Histone-fold [Cynara cardunculus var. scolymus]             75   1e-12
XP_017239317.1 PREDICTED: transcription initiation factor TFIID ...    75   2e-12
KZN00400.1 hypothetical protein DCAR_009154 [Daucus carota subsp...    75   3e-12
XP_008467013.2 PREDICTED: LOW QUALITY PROTEIN: transcription ini...    72   2e-11
XP_011094374.1 PREDICTED: transcription initiation factor TFIID ...    69   2e-10
XP_002308150.1 transcription initiation factor IID subunit A fam...    69   3e-10
OAY40878.1 hypothetical protein MANES_09G056700 [Manihot esculenta]    67   8e-10
XP_007027690.2 PREDICTED: transcription initiation factor TFIID ...    67   1e-09
EOY08191.1 Transcription initiation factor TFIID subunit 12, put...    67   1e-09
EOY08193.1 Transcription initiation factor TFIID subunit 12, put...    67   1e-09
EOY08194.1 Transcription initiation factor TFIID subunit 12, put...    67   1e-09
GAV66089.1 IU_nuc_hydro domain-containing protein/TFIID_20kDa do...    65   4e-09
KHN24781.1 hypothetical protein glysoja_045645 [Glycine soja]          64   1e-08
KDO61106.1 hypothetical protein CISIN_1g009336mg [Citrus sinensis]     64   1e-08
KDO61105.1 hypothetical protein CISIN_1g009336mg [Citrus sinensis]     64   1e-08

>CBI30264.3 unnamed protein product, partial [Vitis vinifera]
          Length = 372

 Score = 85.9 bits (211), Expect = 2e-16
 Identities = 52/113 (46%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
 Frame = -3

Query: 339 AELNFQGHNLLRXXXXXXXXXXVLNTSQSSQPHNQPSLPSRSQGKPPLPPSLYRPQLNAQ 160
           A  NFQGH LLR            NTSQS QPHNQP L S SQGKPPLP   +RPQ+ AQ
Sbjct: 64  ATQNFQGHGLLRASSVGSPGAPSPNTSQSMQPHNQPWLSSGSQGKPPLPSPSFRPQMTAQ 123

Query: 159 SLXXXXXXXXXXXXPM-TNAXXXXXXXXXXXXXXXXSHQPQEHYGQ*FPPSKI 4
           SL            P+ T +                SHQ QEHYGQ FPPS++
Sbjct: 124 SLPQRSHIPQQHHHPLPTASQQQQMSTAQQPQQPLLSHQQQEHYGQQFPPSRV 176


>XP_010654342.1 PREDICTED: transcription initiation factor TFIID subunit 12,
           partial [Vitis vinifera]
          Length = 495

 Score = 85.9 bits (211), Expect = 3e-16
 Identities = 52/113 (46%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
 Frame = -3

Query: 339 AELNFQGHNLLRXXXXXXXXXXVLNTSQSSQPHNQPSLPSRSQGKPPLPPSLYRPQLNAQ 160
           A  NFQGH LLR            NTSQS QPHNQP L S SQGKPPLP   +RPQ+ AQ
Sbjct: 187 ATQNFQGHGLLRASSVGSPGAPSPNTSQSMQPHNQPWLSSGSQGKPPLPSPSFRPQMTAQ 246

Query: 159 SLXXXXXXXXXXXXPM-TNAXXXXXXXXXXXXXXXXSHQPQEHYGQ*FPPSKI 4
           SL            P+ T +                SHQ QEHYGQ FPPS++
Sbjct: 247 SLPQRSHIPQQHHHPLPTASQQQQMSTAQQPQQPLLSHQQQEHYGQQFPPSRV 299


>XP_008462670.1 PREDICTED: transcription initiation factor TFIID subunit 12
           [Cucumis melo]
          Length = 486

 Score = 79.3 bits (194), Expect = 6e-14
 Identities = 46/111 (41%), Positives = 54/111 (48%)
 Frame = -3

Query: 339 AELNFQGHNLLRXXXXXXXXXXVLNTSQSSQPHNQPSLPSRSQGKPPLPPSLYRPQLNAQ 160
           A  +FQGH LLR          + NTSQ  QP NQP LPS SQGKPPLP   YRPQ N+ 
Sbjct: 192 ASQSFQGHGLLRVPSTSSPSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSS 251

Query: 159 SLXXXXXXXXXXXXPMTNAXXXXXXXXXXXXXXXXSHQPQEHYGQ*FPPSK 7
           ++            P+T                  SHQPQEH+ Q F PS+
Sbjct: 252 AMQQRSHIPQQQNHPLTPVSQQQQISSAPQQQPAQSHQPQEHFAQQFQPSR 302


>XP_011657695.1 PREDICTED: transcription initiation factor TFIID subunit 12 isoform
           X1 [Cucumis sativus] KGN48255.1 hypothetical protein
           Csa_6G452070 [Cucumis sativus]
          Length = 511

 Score = 77.8 bits (190), Expect = 2e-13
 Identities = 46/111 (41%), Positives = 53/111 (47%)
 Frame = -3

Query: 339 AELNFQGHNLLRXXXXXXXXXXVLNTSQSSQPHNQPSLPSRSQGKPPLPPSLYRPQLNAQ 160
           A  NFQGH LLR          + NTSQ  QP NQP LPS SQGKPPLP   YRPQ N+ 
Sbjct: 217 ASQNFQGHGLLRVPSTSSPSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSP 276

Query: 159 SLXXXXXXXXXXXXPMTNAXXXXXXXXXXXXXXXXSHQPQEHYGQ*FPPSK 7
           ++            P+T                  SHQPQEH+ Q F  S+
Sbjct: 277 AMQQRSHIPQQQNHPLTPVSQQQQISSAPQQQPAQSHQPQEHFAQQFQQSR 327


>XP_011657696.1 PREDICTED: transcription initiation factor TFIID subunit 12 isoform
           X2 [Cucumis sativus]
          Length = 468

 Score = 77.0 bits (188), Expect = 4e-13
 Identities = 45/108 (41%), Positives = 52/108 (48%)
 Frame = -3

Query: 330 NFQGHNLLRXXXXXXXXXXVLNTSQSSQPHNQPSLPSRSQGKPPLPPSLYRPQLNAQSLX 151
           NFQGH LLR          + NTSQ  QP NQP LPS SQGKPPLP   YRPQ N+ ++ 
Sbjct: 177 NFQGHGLLRVPSTSSPSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSPAMQ 236

Query: 150 XXXXXXXXXXXPMTNAXXXXXXXXXXXXXXXXSHQPQEHYGQ*FPPSK 7
                      P+T                  SHQPQEH+ Q F  S+
Sbjct: 237 QRSHIPQQQNHPLTPVSQQQQISSAPQQQPAQSHQPQEHFAQQFQQSR 284


>KVH90342.1 Histone-fold [Cynara cardunculus var. scolymus]
          Length = 350

 Score = 75.1 bits (183), Expect = 1e-12
 Identities = 46/112 (41%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
 Frame = -3

Query: 336 ELNFQGHNLLRXXXXXXXXXXVLNTSQSSQPHNQPSLPSRSQGKPPLPPSLYRPQLNAQS 157
           ++NFQ H LLR            +T QSSQPHNQP L S SQGKPPLPP  +RPQ+++QS
Sbjct: 43  QMNFQEHGLLRLPSVGSPGSPAPSTPQSSQPHNQPWLSSGSQGKPPLPPPSFRPQMSSQS 102

Query: 156 LXXXXXXXXXXXXPM-TNAXXXXXXXXXXXXXXXXSHQPQEHYGQ*FPPSKI 4
           L             M T                  S QPQEHY    PPS++
Sbjct: 103 LQQRSHIPSQQQSTMSTPTQQPQTSSSLQSQSSSLSQQPQEHYS--LPPSRV 152


>XP_017239317.1 PREDICTED: transcription initiation factor TFIID subunit 12,
           partial [Daucus carota subsp. sativus]
          Length = 509

 Score = 74.7 bits (182), Expect = 2e-12
 Identities = 44/110 (40%), Positives = 52/110 (47%)
 Frame = -3

Query: 330 NFQGHNLLRXXXXXXXXXXVLNTSQSSQPHNQPSLPSRSQGKPPLPPSLYRPQLNAQSLX 151
           NFQ H+LLR            ++SQ  QPHNQP LPS SQGKPPLPP+ +RP  + Q   
Sbjct: 211 NFQNHSLLRASAVGSP-----SSSQGLQPHNQPWLPSGSQGKPPLPPTQFRPPSSTQPPQ 265

Query: 150 XXXXXXXXXXXPMTNAXXXXXXXXXXXXXXXXSHQPQEHYGQ*FPPSKIQ 1
                                           SHQ QEHYGQ +PPS+IQ
Sbjct: 266 QRSILPPHHLPIANTQQQQHQISSGQQSQAALSHQQQEHYGQQYPPSRIQ 315


>KZN00400.1 hypothetical protein DCAR_009154 [Daucus carota subsp. sativus]
          Length = 711

 Score = 74.7 bits (182), Expect = 3e-12
 Identities = 44/110 (40%), Positives = 52/110 (47%)
 Frame = -3

Query: 330 NFQGHNLLRXXXXXXXXXXVLNTSQSSQPHNQPSLPSRSQGKPPLPPSLYRPQLNAQSLX 151
           NFQ H+LLR            ++SQ  QPHNQP LPS SQGKPPLPP+ +RP  + Q   
Sbjct: 413 NFQNHSLLRASAVGSP-----SSSQGLQPHNQPWLPSGSQGKPPLPPTQFRPPSSTQPPQ 467

Query: 150 XXXXXXXXXXXPMTNAXXXXXXXXXXXXXXXXSHQPQEHYGQ*FPPSKIQ 1
                                           SHQ QEHYGQ +PPS+IQ
Sbjct: 468 QRSILPPHHLPIANTQQQQHQISSGQQSQAALSHQQQEHYGQQYPPSRIQ 517


>XP_008467013.2 PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor
           TFIID subunit 12-like, partial [Cucumis melo]
          Length = 307

 Score = 71.6 bits (174), Expect = 2e-11
 Identities = 42/104 (40%), Positives = 49/104 (47%)
 Frame = -3

Query: 318 HNLLRXXXXXXXXXXVLNTSQSSQPHNQPSLPSRSQGKPPLPPSLYRPQLNAQSLXXXXX 139
           H LLR          + NTSQ  QP NQP LPS SQGKPPLP   YRPQ N+ ++     
Sbjct: 20  HGLLRVPSTSSPSSSLPNTSQGMQPTNQPWLPSSSQGKPPLPTPSYRPQANSSAMQQRSH 79

Query: 138 XXXXXXXPMTNAXXXXXXXXXXXXXXXXSHQPQEHYGQ*FPPSK 7
                  P+T                  SHQPQEH+ Q F PS+
Sbjct: 80  IPQQQNHPLTPVSQQQQISSAPQQQPAQSHQPQEHFAQQFQPSR 123


>XP_011094374.1 PREDICTED: transcription initiation factor TFIID subunit 12
           [Sesamum indicum]
          Length = 494

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 44/114 (38%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
 Frame = -3

Query: 339 AELNFQGHNLLRXXXXXXXXXXVLNTSQSSQPHNQPSLPSRSQGKPPLPPSLYRPQLNAQ 160
           A  NFQGH +LR            ++SQS QP NQP L S +QGKPPLP    RPQ + Q
Sbjct: 187 AAQNFQGHGMLRVSSLGSPGSPSPSSSQSPQPQNQPWLSSGTQGKPPLPTPSLRPQTSTQ 246

Query: 159 SLXXXXXXXXXXXXPM-TNAXXXXXXXXXXXXXXXXSHQPQEHYGQ*FPPSKIQ 1
           S              M T                  S QP EH+GQ +PPS+IQ
Sbjct: 247 SFQQRPHIPQQHHQNMSTTPQQQPIGSSQQPPQSSASGQPLEHHGQQYPPSRIQ 300


>XP_002308150.1 transcription initiation factor IID subunit A family protein
           [Populus trichocarpa] EEE91673.1 transcription
           initiation factor IID subunit A family protein [Populus
           trichocarpa]
          Length = 497

 Score = 68.6 bits (166), Expect = 3e-10
 Identities = 46/110 (41%), Positives = 52/110 (47%)
 Frame = -3

Query: 330 NFQGHNLLRXXXXXXXXXXVLNTSQSSQPHNQPSLPSRSQGKPPLPPSLYRPQLNAQSLX 151
           NF GH  +R          V NTSQS Q  NQ  L S SQGKPPLP   YRPQ+N+ SL 
Sbjct: 197 NFPGHVFIRSTPVGTAGSPVPNTSQSLQSPNQLWLSSASQGKPPLPSPSYRPQMNSPSLQ 256

Query: 150 XXXXXXXXXXXPMTNAXXXXXXXXXXXXXXXXSHQPQEHYGQ*FPPSKIQ 1
                      P T +                SHQ  EHYGQ FPPS++Q
Sbjct: 257 QRSHIPPQHHSPPTTS-QQQHMSPAQPQQPLQSHQQPEHYGQQFPPSRVQ 305


>OAY40878.1 hypothetical protein MANES_09G056700 [Manihot esculenta]
          Length = 557

 Score = 67.4 bits (163), Expect = 8e-10
 Identities = 40/105 (38%), Positives = 46/105 (43%)
 Frame = -3

Query: 330 NFQGHNLLRXXXXXXXXXXVLNTSQSSQPHNQPSLPSRSQGKPPLPPSLYRPQLNAQSLX 151
           NFQGH  +R            NTSQS Q  +QP L S SQGKPPLP   YR Q++  SL 
Sbjct: 257 NFQGHGFMRPSSVGPPSSSAPNTSQSMQSPSQPWLSSGSQGKPPLPSPSYRTQISTPSLQ 316

Query: 150 XXXXXXXXXXXPMTNAXXXXXXXXXXXXXXXXSHQPQEHYGQ*FP 16
                        T +                SHQP +HYGQ FP
Sbjct: 317 QRSHIPQQHHSLTTTSQQQQHMSSAQTQQPLPSHQPSDHYGQQFP 361


>XP_007027690.2 PREDICTED: transcription initiation factor TFIID subunit 12
           [Theobroma cacao] XP_007027689.2 PREDICTED:
           transcription initiation factor TFIID subunit 12
           [Theobroma cacao]
          Length = 560

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 42/112 (37%), Positives = 52/112 (46%)
 Frame = -3

Query: 339 AELNFQGHNLLRXXXXXXXXXXVLNTSQSSQPHNQPSLPSRSQGKPPLPPSLYRPQLNAQ 160
           A  NFQGH L+R            +T Q++Q  NQP L S +QGKPPLPP  YRPQ+N+ 
Sbjct: 254 ATQNFQGHGLMRVSAVGTSGSSTPSTPQTTQSLNQPWLSSGAQGKPPLPPPSYRPQINSP 313

Query: 159 SLXXXXXXXXXXXXPMTNAXXXXXXXXXXXXXXXXSHQPQEHYGQ*FPPSKI 4
           SL              T                  SHQ QEH+GQ F  S++
Sbjct: 314 SLQQRSHISQQHHSLPT-VSQQQHVSSPQVPQPLPSHQQQEHFGQQFSQSRV 364


>EOY08191.1 Transcription initiation factor TFIID subunit 12, putative isoform
           1 [Theobroma cacao] EOY08192.1 Transcription initiation
           factor TFIID subunit 12, putative isoform 1 [Theobroma
           cacao]
          Length = 560

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 42/112 (37%), Positives = 52/112 (46%)
 Frame = -3

Query: 339 AELNFQGHNLLRXXXXXXXXXXVLNTSQSSQPHNQPSLPSRSQGKPPLPPSLYRPQLNAQ 160
           A  NFQGH L+R            +T Q++Q  NQP L S +QGKPPLPP  YRPQ+N+ 
Sbjct: 254 ATQNFQGHGLMRVSAVGTSGSSTPSTPQTTQSLNQPWLSSGAQGKPPLPPPSYRPQINSP 313

Query: 159 SLXXXXXXXXXXXXPMTNAXXXXXXXXXXXXXXXXSHQPQEHYGQ*FPPSKI 4
           SL              T                  SHQ QEH+GQ F  S++
Sbjct: 314 SLQQRSHISQQHHSLPT-VSQQQHVSSPQVPQPLPSHQQQEHFGQQFSQSRV 364


>EOY08193.1 Transcription initiation factor TFIID subunit 12, putative isoform
           3 [Theobroma cacao]
          Length = 561

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 42/112 (37%), Positives = 52/112 (46%)
 Frame = -3

Query: 339 AELNFQGHNLLRXXXXXXXXXXVLNTSQSSQPHNQPSLPSRSQGKPPLPPSLYRPQLNAQ 160
           A  NFQGH L+R            +T Q++Q  NQP L S +QGKPPLPP  YRPQ+N+ 
Sbjct: 254 ATQNFQGHGLMRVSAVGTSGSSTPSTPQTTQSLNQPWLSSGAQGKPPLPPPSYRPQINSP 313

Query: 159 SLXXXXXXXXXXXXPMTNAXXXXXXXXXXXXXXXXSHQPQEHYGQ*FPPSKI 4
           SL              T                  SHQ QEH+GQ F  S++
Sbjct: 314 SLQQRSHISQQHHSLPT-VSQQQHVSSPQVPQPLPSHQQQEHFGQQFSQSRV 364


>EOY08194.1 Transcription initiation factor TFIID subunit 12, putative isoform
           4 [Theobroma cacao]
          Length = 603

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 42/112 (37%), Positives = 52/112 (46%)
 Frame = -3

Query: 339 AELNFQGHNLLRXXXXXXXXXXVLNTSQSSQPHNQPSLPSRSQGKPPLPPSLYRPQLNAQ 160
           A  NFQGH L+R            +T Q++Q  NQP L S +QGKPPLPP  YRPQ+N+ 
Sbjct: 254 ATQNFQGHGLMRVSAVGTSGSSTPSTPQTTQSLNQPWLSSGAQGKPPLPPPSYRPQINSP 313

Query: 159 SLXXXXXXXXXXXXPMTNAXXXXXXXXXXXXXXXXSHQPQEHYGQ*FPPSKI 4
           SL              T                  SHQ QEH+GQ F  S++
Sbjct: 314 SLQQRSHISQQHHSLPT-VSQQQHVSSPQVPQPLPSHQQQEHFGQQFSQSRV 364


>GAV66089.1 IU_nuc_hydro domain-containing protein/TFIID_20kDa
           domain-containing protein [Cephalotus follicularis]
          Length = 897

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 43/112 (38%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
 Frame = -3

Query: 330 NFQGHNLLRXXXXXXXXXXVLNTSQSSQPH---NQPSLPSRSQGKPPLPPSLYRPQLNAQ 160
           +FQGH+ LR            N SQ+ Q     NQP L S  QGKPPLPP  YR Q+N+ 
Sbjct: 232 SFQGHSALRVSSAGSPVSPAPNASQNMQSGSSLNQPWLSSVPQGKPPLPPPSYRAQMNSP 291

Query: 159 SLXXXXXXXXXXXXPMTNAXXXXXXXXXXXXXXXXSHQPQEHYGQ*FPPSKI 4
           S+              T A                SHQPQEHYGQ FPP ++
Sbjct: 292 SMPQRSHIPLQHPPLPT-ASQQQHISPAQPPQPPPSHQPQEHYGQQFPPPRV 342


>KHN24781.1 hypothetical protein glysoja_045645 [Glycine soja]
          Length = 346

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 41/108 (37%), Positives = 52/108 (48%)
 Frame = -3

Query: 330 NFQGHNLLRXXXXXXXXXXVLNTSQSSQPHNQPSLPSRSQGKPPLPPSLYRPQLNAQSLX 151
           +FQGH L+R            ++SQS Q  NQP L S SQGKPPLP + YR QLN QS+ 
Sbjct: 100 SFQGHGLMRPSSVGSTATPSPSSSQSMQSLNQPWLSSGSQGKPPLPSAAYRQQLNPQSMQ 159

Query: 150 XXXXXXXXXXXPMTNAXXXXXXXXXXXXXXXXSHQPQEHYGQ*FPPSK 7
                        T++                S+Q QEH+GQ  PPS+
Sbjct: 160 QRSHIPPMQQSTPTSS-------QQQQQQPLLSNQSQEHFGQQVPPSR 200


>KDO61106.1 hypothetical protein CISIN_1g009336mg [Citrus sinensis]
          Length = 441

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 43/110 (39%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
 Frame = -3

Query: 330 NFQGHNLLRXXXXXXXXXXVLNTSQSSQPHNQPSLPSRSQGKPPL-PPSLYRPQLNAQSL 154
           NFQG  L+R            NTSQS Q  NQP L S SQGKPPL PPS YRPQ+N  S+
Sbjct: 241 NFQGQGLMRVSQVGSPGSSSPNTSQSVQSFNQPWLSSGSQGKPPLAPPSTYRPQMNTPSM 300

Query: 153 XXXXXXXXXXXXPMTNAXXXXXXXXXXXXXXXXSHQPQEHYGQ*FPPSKI 4
                         TN                 SHQ  +HYGQ F   ++
Sbjct: 301 QQRSHIPQQHSPLSTN-LQQQHLSSVQPQQSKPSHQLPDHYGQQFSSPRV 349


>KDO61105.1 hypothetical protein CISIN_1g009336mg [Citrus sinensis]
          Length = 496

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 43/110 (39%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
 Frame = -3

Query: 330 NFQGHNLLRXXXXXXXXXXVLNTSQSSQPHNQPSLPSRSQGKPPL-PPSLYRPQLNAQSL 154
           NFQG  L+R            NTSQS Q  NQP L S SQGKPPL PPS YRPQ+N  S+
Sbjct: 241 NFQGQGLMRVSQVGSPGSSSPNTSQSVQSFNQPWLSSGSQGKPPLAPPSTYRPQMNTPSM 300

Query: 153 XXXXXXXXXXXXPMTNAXXXXXXXXXXXXXXXXSHQPQEHYGQ*FPPSKI 4
                         TN                 SHQ  +HYGQ F   ++
Sbjct: 301 QQRSHIPQQHSPLSTN-LQQQHLSSVQPQQSKPSHQLPDHYGQQFSSPRV 349


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