BLASTX nr result
ID: Panax24_contig00004673
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00004673
(560 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_012856290.1 PREDICTED: mediator of RNA polymerase II transcri... 116 1e-28
XP_012856289.1 PREDICTED: mediator of RNA polymerase II transcri... 116 1e-28
XP_017236756.1 PREDICTED: mediator of RNA polymerase II transcri... 115 3e-28
CBI36012.3 unnamed protein product, partial [Vitis vinifera] 114 3e-28
ALO61895.1 mediator of RNA polymerase II transcription subunit 6... 115 3e-28
EYU21430.1 hypothetical protein MIMGU_mgv1a009886mg [Erythranthe... 116 5e-28
CAN68925.1 hypothetical protein VITISV_044247 [Vitis vinifera] 114 6e-28
XP_002282496.1 PREDICTED: mediator of RNA polymerase II transcri... 114 6e-28
XP_018843290.1 PREDICTED: mediator of RNA polymerase II transcri... 113 1e-27
CDP21043.1 unnamed protein product [Coffea canephora] 111 6e-27
EOY26989.1 RNA polymerase transcriptional regulation mediator-re... 109 6e-27
XP_007217752.1 hypothetical protein PRUPE_ppa010369mg [Prunus pe... 110 1e-26
XP_015889962.1 PREDICTED: mediator of RNA polymerase II transcri... 110 2e-26
XP_011072456.1 PREDICTED: mediator of RNA polymerase II transcri... 110 2e-26
XP_007024366.1 PREDICTED: mediator of RNA polymerase II transcri... 109 4e-26
GAV75935.1 Med6 domain-containing protein [Cephalotus follicularis] 108 5e-26
XP_006372643.1 RNA polymerase transcriptional regulation mediato... 108 7e-26
XP_011651474.1 PREDICTED: mediator of RNA polymerase II transcri... 108 9e-26
XP_007135611.1 hypothetical protein PHAVU_010G143300g [Phaseolus... 108 1e-25
XP_004149176.2 PREDICTED: mediator of RNA polymerase II transcri... 108 1e-25
>XP_012856290.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
isoform X2 [Erythranthe guttata]
Length = 260
Score = 116 bits (290), Expect = 1e-28
Identities = 65/106 (61%), Positives = 77/106 (72%)
Frame = +1
Query: 1 ISKAFTTASSKLEKIGYVDAGNESSALESKVSKEMINFKEVKRINHILASLQRKLXXXXX 180
ISKAF TA+SKLEKIGYVDA NES++ E K +KE I+FKE+KR++HILASLQRKL
Sbjct: 155 ISKAFNTAASKLEKIGYVDAENESTSSEPKAAKETIDFKELKRVDHILASLQRKL-PPAP 213
Query: 181 XXXXXXXXXXXLSAEGGESTSEAQQTEQLPSVDPILDQGPSKRIKF 318
LS E GE +S++Q E LP VDPI+DQGPSKRIKF
Sbjct: 214 PPPPFPDGYAPLSTE-GEKSSDSQSAEPLPPVDPIIDQGPSKRIKF 258
>XP_012856289.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
isoform X1 [Erythranthe guttata]
Length = 270
Score = 116 bits (290), Expect = 1e-28
Identities = 65/106 (61%), Positives = 77/106 (72%)
Frame = +1
Query: 1 ISKAFTTASSKLEKIGYVDAGNESSALESKVSKEMINFKEVKRINHILASLQRKLXXXXX 180
ISKAF TA+SKLEKIGYVDA NES++ E K +KE I+FKE+KR++HILASLQRKL
Sbjct: 165 ISKAFNTAASKLEKIGYVDAENESTSSEPKAAKETIDFKELKRVDHILASLQRKL-PPAP 223
Query: 181 XXXXXXXXXXXLSAEGGESTSEAQQTEQLPSVDPILDQGPSKRIKF 318
LS E GE +S++Q E LP VDPI+DQGPSKRIKF
Sbjct: 224 PPPPFPDGYAPLSTE-GEKSSDSQSAEPLPPVDPIIDQGPSKRIKF 268
>XP_017236756.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Daucus carota subsp. sativus] KZN06763.1 hypothetical
protein DCAR_007600 [Daucus carota subsp. sativus]
Length = 254
Score = 115 bits (287), Expect = 3e-28
Identities = 68/106 (64%), Positives = 75/106 (70%)
Frame = +1
Query: 1 ISKAFTTASSKLEKIGYVDAGNESSALESKVSKEMINFKEVKRINHILASLQRKLXXXXX 180
ISKAFTTA+SKLEKIGYVD NES+ L +K KE I+ KEVKRI+HILASLQRKL
Sbjct: 152 ISKAFTTAASKLEKIGYVDTENESATLLAKAPKETIDLKEVKRIDHILASLQRKLPPAPP 211
Query: 181 XXXXXXXXXXXLSAEGGESTSEAQQTEQLPSVDPILDQGPSKRIKF 318
SAE GE+ SEAQ QLP VDPILDQGPSKR+KF
Sbjct: 212 PPPFPEGYNPPKSAE-GENASEAQ--AQLPPVDPILDQGPSKRMKF 254
>CBI36012.3 unnamed protein product, partial [Vitis vinifera]
Length = 226
Score = 114 bits (285), Expect = 3e-28
Identities = 64/107 (59%), Positives = 75/107 (70%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 ISKAFTTASSKLEKIGYVDAGNESSALESKVSKEMINFKEVKRINHILASLQRKLXXXXX 180
ISKAFTTA+SKLEKIGYVDA NE+ ALESKV KE I+FKEV R++ ILASLQRKL
Sbjct: 120 ISKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVMRVDQILASLQRKLPPAPP 179
Query: 181 XXXXXXXXXXXLSAEGGESTSEAQQTE-QLPSVDPILDQGPSKRIKF 318
+AEG + Q E QLP++DPI+DQGPSKR+KF
Sbjct: 180 PPQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMKF 226
>ALO61895.1 mediator of RNA polymerase II transcription subunit 6 [Rehmannia
glutinosa]
Length = 256
Score = 115 bits (287), Expect = 3e-28
Identities = 64/106 (60%), Positives = 78/106 (73%)
Frame = +1
Query: 1 ISKAFTTASSKLEKIGYVDAGNESSALESKVSKEMINFKEVKRINHILASLQRKLXXXXX 180
ISKAF TA+SKLEKIGYVDA NES++ E+K +KE I+FKE+KR++HILASLQRKL
Sbjct: 153 ISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKLPPAPP 212
Query: 181 XXXXXXXXXXXLSAEGGESTSEAQQTEQLPSVDPILDQGPSKRIKF 318
+AEG +S S+ QQ E LP VDPI+DQGPSKR+KF
Sbjct: 213 PPPFPDGYTPP-TAEGDKS-SDTQQAEPLPPVDPIIDQGPSKRMKF 256
>EYU21430.1 hypothetical protein MIMGU_mgv1a009886mg [Erythranthe guttata]
Length = 328
Score = 116 bits (290), Expect = 5e-28
Identities = 65/106 (61%), Positives = 77/106 (72%)
Frame = +1
Query: 1 ISKAFTTASSKLEKIGYVDAGNESSALESKVSKEMINFKEVKRINHILASLQRKLXXXXX 180
ISKAF TA+SKLEKIGYVDA NES++ E K +KE I+FKE+KR++HILASLQRKL
Sbjct: 223 ISKAFNTAASKLEKIGYVDAENESTSSEPKAAKETIDFKELKRVDHILASLQRKL-PPAP 281
Query: 181 XXXXXXXXXXXLSAEGGESTSEAQQTEQLPSVDPILDQGPSKRIKF 318
LS E GE +S++Q E LP VDPI+DQGPSKRIKF
Sbjct: 282 PPPPFPDGYAPLSTE-GEKSSDSQSAEPLPPVDPIIDQGPSKRIKF 326
>CAN68925.1 hypothetical protein VITISV_044247 [Vitis vinifera]
Length = 253
Score = 114 bits (285), Expect = 6e-28
Identities = 64/107 (59%), Positives = 75/107 (70%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 ISKAFTTASSKLEKIGYVDAGNESSALESKVSKEMINFKEVKRINHILASLQRKLXXXXX 180
ISKAFTTA+SKLEKIGYVDA NE+ ALESKV KE I+FKEV R++ ILASLQRKL
Sbjct: 147 ISKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVMRVDQILASLQRKLPPAPP 206
Query: 181 XXXXXXXXXXXLSAEGGESTSEAQQTE-QLPSVDPILDQGPSKRIKF 318
+AEG + Q E QLP++DPI+DQGPSKR+KF
Sbjct: 207 APQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMKF 253
>XP_002282496.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Vitis vinifera]
Length = 258
Score = 114 bits (285), Expect = 6e-28
Identities = 64/107 (59%), Positives = 75/107 (70%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 ISKAFTTASSKLEKIGYVDAGNESSALESKVSKEMINFKEVKRINHILASLQRKLXXXXX 180
ISKAFTTA+SKLEKIGYVDA NE+ ALESKV KE I+FKEV R++ ILASLQRKL
Sbjct: 152 ISKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVMRVDQILASLQRKLPPAPP 211
Query: 181 XXXXXXXXXXXLSAEGGESTSEAQQTE-QLPSVDPILDQGPSKRIKF 318
+AEG + Q E QLP++DPI+DQGPSKR+KF
Sbjct: 212 PPQFPEGYAPPPTAEGEKGPETQQAAEPQLPALDPIIDQGPSKRMKF 258
>XP_018843290.1 PREDICTED: mediator of RNA polymerase II transcription subunit
6-like [Juglans regia]
Length = 256
Score = 113 bits (283), Expect = 1e-27
Identities = 63/106 (59%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Frame = +1
Query: 1 ISKAFTTASSKLEKIGYVDAGNESSALESKVSKEMINFKEVKRINHILASLQRKLXXXXX 180
ISKAFTTA+SKLEKIGYVDA N+S+ALESKV+KE I+FKEVKR++HILASLQRKL
Sbjct: 150 ISKAFTTAASKLEKIGYVDAENDSAALESKVAKETIDFKEVKRVDHILASLQRKLPPAPP 209
Query: 181 XXXXXXXXXXXLSAEGGESTSEAQQTE-QLPSVDPILDQGPSKRIK 315
+A+ + Q E Q PSVDPI+DQGP+KR+K
Sbjct: 210 PPPFPEGYVPPHTADAEKGPEGPQSGEPQAPSVDPIIDQGPAKRMK 255
>CDP21043.1 unnamed protein product [Coffea canephora]
Length = 253
Score = 111 bits (278), Expect = 6e-27
Identities = 58/105 (55%), Positives = 73/105 (69%)
Frame = +1
Query: 1 ISKAFTTASSKLEKIGYVDAGNESSALESKVSKEMINFKEVKRINHILASLQRKLXXXXX 180
ISKAF T +SKLEKIGYVDA NE++A ESK SKE I+FKE+KR++HILASLQRKL
Sbjct: 148 ISKAFNTVASKLEKIGYVDAENETTASESKASKETIDFKEIKRVDHILASLQRKLPAAPP 207
Query: 181 XXXXXXXXXXXLSAEGGESTSEAQQTEQLPSVDPILDQGPSKRIK 315
+AEG + + + Q Q ++DPI+DQGPSKR+K
Sbjct: 208 APAFPEGYTPPTTAEGEKGSEDQQAELQTATLDPIIDQGPSKRVK 252
>EOY26989.1 RNA polymerase transcriptional regulation mediator-related isoform
2 [Theobroma cacao]
Length = 184
Score = 109 bits (273), Expect = 6e-27
Identities = 60/107 (56%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 ISKAFTTASSKLEKIGYVDAGNESSALESKVSKEMINFKEVKRINHILASLQRKLXXXXX 180
ISKAFTTA+SKLEKIGYVD NES ESK KE I+FKEVKR++HILASLQRKL
Sbjct: 78 ISKAFTTAASKLEKIGYVDTENESETFESKGGKETIDFKEVKRVDHILASLQRKLPPAPP 137
Query: 181 XXXXXXXXXXXLSAEGGESTSEAQQTE-QLPSVDPILDQGPSKRIKF 318
+AE + Q E Q P++DPI+DQGP+KR+KF
Sbjct: 138 PPPFPEGFIPLATAEAEKDPENQQAVETQPPAIDPIIDQGPAKRMKF 184
>XP_007217752.1 hypothetical protein PRUPE_ppa010369mg [Prunus persica] ONI15677.1
hypothetical protein PRUPE_3G054900 [Prunus persica]
Length = 252
Score = 110 bits (276), Expect = 1e-26
Identities = 61/108 (56%), Positives = 76/108 (70%), Gaps = 2/108 (1%)
Frame = +1
Query: 1 ISKAFTTASSKLEKIGYVDAGNESSALESKVSKEMINFKEVKRINHILASLQRKL--XXX 174
ISKAFTTA+SKLEKIGYVD+ NE++A ESKV+KE I+FKEVKR++HIL SLQRKL
Sbjct: 146 ISKAFTTAASKLEKIGYVDSENETAAFESKVTKETIDFKEVKRVDHILQSLQRKLPPAPP 205
Query: 175 XXXXXXXXXXXXXLSAEGGESTSEAQQTEQLPSVDPILDQGPSKRIKF 318
AE G T +A + +Q P +DPI+DQGP+KR+KF
Sbjct: 206 PPPFPEGYVPAPTAEAENGPETQQAGEPQQ-PQMDPIIDQGPAKRMKF 252
>XP_015889962.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Ziziphus jujuba]
Length = 248
Score = 110 bits (274), Expect = 2e-26
Identities = 63/108 (58%), Positives = 75/108 (69%), Gaps = 2/108 (1%)
Frame = +1
Query: 1 ISKAFTTASSKLEKIGYVDAGNESSALESKVSKEMINFKEVKRINHILASLQRKLXXXXX 180
ISKAFTTA+SKLEKIGYVD+ NES LESKV KE I+FKEVKR++HILASLQRKL
Sbjct: 142 ISKAFTTAASKLEKIGYVDSENESVPLESKVGKEAIDFKEVKRVDHILASLQRKLPPAPP 201
Query: 181 XXXXXXXXXXXLSAEGGESTSEAQQT--EQLPSVDPILDQGPSKRIKF 318
+ E E+ E QQ Q P+VDPI+DQGP+KR++F
Sbjct: 202 PPPFPDGYIPPPTTE-AENAPETQQAGEPQQPTVDPIVDQGPAKRMRF 248
>XP_011072456.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Sesamum indicum]
Length = 254
Score = 110 bits (274), Expect = 2e-26
Identities = 60/106 (56%), Positives = 74/106 (69%)
Frame = +1
Query: 1 ISKAFTTASSKLEKIGYVDAGNESSALESKVSKEMINFKEVKRINHILASLQRKLXXXXX 180
ISKAF TA+SKLEKIGYVDA NES++ E K +KE I+FKE+KR++HILASLQRKL
Sbjct: 151 ISKAFNTAASKLEKIGYVDAENESTSSEPKAAKETIDFKELKRVDHILASLQRKLPPAPP 210
Query: 181 XXXXXXXXXXXLSAEGGESTSEAQQTEQLPSVDPILDQGPSKRIKF 318
+ GE +S+ QQ E +VDPI+DQGPSKR+KF
Sbjct: 211 PPPFPEGYAPPTAE--GEKSSDTQQAEPQGAVDPIIDQGPSKRMKF 254
>XP_007024366.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Theobroma cacao] EOY26988.1 RNA polymerase
transcriptional regulation mediator-related isoform 1
[Theobroma cacao]
Length = 257
Score = 109 bits (273), Expect = 4e-26
Identities = 60/107 (56%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Frame = +1
Query: 1 ISKAFTTASSKLEKIGYVDAGNESSALESKVSKEMINFKEVKRINHILASLQRKLXXXXX 180
ISKAFTTA+SKLEKIGYVD NES ESK KE I+FKEVKR++HILASLQRKL
Sbjct: 151 ISKAFTTAASKLEKIGYVDTENESETFESKGGKETIDFKEVKRVDHILASLQRKLPPAPP 210
Query: 181 XXXXXXXXXXXLSAEGGESTSEAQQTE-QLPSVDPILDQGPSKRIKF 318
+AE + Q E Q P++DPI+DQGP+KR+KF
Sbjct: 211 PPPFPEGFIPLATAEAEKDPENQQAVETQPPAIDPIIDQGPAKRMKF 257
>GAV75935.1 Med6 domain-containing protein [Cephalotus follicularis]
Length = 244
Score = 108 bits (271), Expect = 5e-26
Identities = 62/108 (57%), Positives = 76/108 (70%), Gaps = 2/108 (1%)
Frame = +1
Query: 1 ISKAFTTASSKLEKIGYVDAGNESSALESKVSKEMINFKEVKRINHILASLQRKLXXXXX 180
ISKAFTTA+SKLEKIGYVDA NE+ ESKV KE+I+FKEVKR++HILASL+RKL
Sbjct: 138 ISKAFTTAASKLEKIGYVDAENENVHSESKVGKELIDFKEVKRVDHILASLKRKLPPAPP 197
Query: 181 XXXXXXXXXXXLS--AEGGESTSEAQQTEQLPSVDPILDQGPSKRIKF 318
L+ AE G T +A + Q P +DPI+DQGP+KR+KF
Sbjct: 198 PPPFPEGYIPALTSEAEKGPETQQAGE-PQPPPIDPIIDQGPAKRMKF 244
>XP_006372643.1 RNA polymerase transcriptional regulation mediator-related family
protein [Populus trichocarpa] ERP50440.1 RNA polymerase
transcriptional regulation mediator-related family
protein [Populus trichocarpa]
Length = 259
Score = 108 bits (271), Expect = 7e-26
Identities = 64/108 (59%), Positives = 74/108 (68%), Gaps = 2/108 (1%)
Frame = +1
Query: 1 ISKAFTTASSKLEKIGYVDAGNESSALESKVSKEMINFKEVKRINHILASLQRKLXXXXX 180
ISKAF TA+SKLEKIGYVD+ NE +A ESK KE+I+FKEVKRI+HILASLQRKL
Sbjct: 153 ISKAFGTAASKLEKIGYVDSENEGAASESKTGKEVIDFKEVKRIDHILASLQRKLPPAPP 212
Query: 181 XXXXXXXXXXXLSAEGGESTSEAQQ--TEQLPSVDPILDQGPSKRIKF 318
+ E E E QQ QLPSVDPI+DQGP+KR+KF
Sbjct: 213 PPSFPEGYVPQPTTE-EEKGPETQQGGEPQLPSVDPIIDQGPAKRMKF 259
>XP_011651474.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
isoform X2 [Cucumis sativus]
Length = 236
Score = 108 bits (269), Expect = 9e-26
Identities = 61/106 (57%), Positives = 70/106 (66%)
Frame = +1
Query: 1 ISKAFTTASSKLEKIGYVDAGNESSALESKVSKEMINFKEVKRINHILASLQRKLXXXXX 180
ISKAFTTASSKLEKIGYVD+ NES E K +KE INFKEVKR++HILASLQRKL
Sbjct: 130 ISKAFTTASSKLEKIGYVDSENESE--EVKPAKETINFKEVKRVDHILASLQRKLPPAPP 187
Query: 181 XXXXXXXXXXXLSAEGGESTSEAQQTEQLPSVDPILDQGPSKRIKF 318
+AE + Q Q PS DPI+DQGP+KR+KF
Sbjct: 188 PPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF 233
>XP_007135611.1 hypothetical protein PHAVU_010G143300g [Phaseolus vulgaris]
ESW07605.1 hypothetical protein PHAVU_010G143300g
[Phaseolus vulgaris]
Length = 247
Score = 108 bits (269), Expect = 1e-25
Identities = 60/108 (55%), Positives = 75/108 (69%), Gaps = 2/108 (1%)
Frame = +1
Query: 1 ISKAFTTASSKLEKIGYVDAGNESSALESKVSKEMINFKEVKRINHILASLQRKLXXXXX 180
I KAFTTA+SKLEKIGYVD+ NE++ +ESK +KE I+ KEVKR++HILASLQRKL
Sbjct: 141 IQKAFTTAASKLEKIGYVDSENETALVESKTAKETIDIKEVKRVDHILASLQRKLPPAPP 200
Query: 181 XXXXXXXXXXXLSAEG--GESTSEAQQTEQLPSVDPILDQGPSKRIKF 318
+AE G T EA +T Q P+ DPI+DQGP+KR+KF
Sbjct: 201 PPPFPEGYVPPPTAEAEKGTETQEAAET-QAPTADPIIDQGPAKRMKF 247
>XP_004149176.2 PREDICTED: mediator of RNA polymerase II transcription subunit 6
isoform X1 [Cucumis sativus] KGN58013.1 hypothetical
protein Csa_3G434940 [Cucumis sativus]
Length = 257
Score = 108 bits (269), Expect = 1e-25
Identities = 61/106 (57%), Positives = 70/106 (66%)
Frame = +1
Query: 1 ISKAFTTASSKLEKIGYVDAGNESSALESKVSKEMINFKEVKRINHILASLQRKLXXXXX 180
ISKAFTTASSKLEKIGYVD+ NES E K +KE INFKEVKR++HILASLQRKL
Sbjct: 151 ISKAFTTASSKLEKIGYVDSENESE--EVKPAKETINFKEVKRVDHILASLQRKLPPAPP 208
Query: 181 XXXXXXXXXXXLSAEGGESTSEAQQTEQLPSVDPILDQGPSKRIKF 318
+AE + Q Q PS DPI+DQGP+KR+KF
Sbjct: 209 PPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF 254