BLASTX nr result
ID: Panax24_contig00004174
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00004174
(353 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAN32998.1 alpha-tubulin 2, partial [Gossypium hirsutum] 194 9e-62
ACJ37364.1 alpha tubulin, partial [Garcinia mangostana] 194 9e-62
ABF46823.1 putative tubulin alpha-1 chain, partial [Fagus sylvat... 196 2e-61
ABB82561.1 alpha-tubulin, partial [Primula vulgaris] 194 2e-61
ABF46824.1 putative tubulin alpha 1 chain, partial [Fagus sylvat... 194 4e-61
JAU36689.1 Tubulin alpha-1 chain, partial [Noccaea caerulescens] 190 7e-61
AFK78039.1 alpha-tubulin, partial [Moringa oleifera] 194 1e-60
ANC98504.1 alpha-tubulin, partial [Paeonia suffruticosa] 194 1e-60
ABH06366.1 alpha-tubulin, partial [Sorbus aucuparia] 194 2e-60
CBI29424.3 unnamed protein product, partial [Vitis vinifera] 194 4e-60
SIP56163.1 alpha-tubulin isoform 6, partial [Sticholonche zanclea] 189 6e-60
JAU27438.1 Tubulin alpha chain, partial [Noccaea caerulescens] 190 6e-60
BAG70024.1 alpha tubulin, partial [Salicornia europaea] 191 8e-60
AAN33000.1 alpha-tubulin 4, partial [Gossypium hirsutum] 194 8e-60
ACN40426.1 unknown [Picea sitchensis] 194 1e-59
XP_002263822.3 PREDICTED: tubulin alpha chain, partial [Vitis vi... 194 1e-59
ANQ69425.1 alpha-tubulin, partial [Avena fatua] 192 1e-59
JAU33729.1 Tubulin alpha chain, partial [Noccaea caerulescens] J... 190 1e-59
XP_015873042.1 PREDICTED: tubulin alpha chain-like, partial [Ziz... 194 2e-59
KJB58759.1 hypothetical protein B456_009G224800 [Gossypium raimo... 194 2e-59
>AAN32998.1 alpha-tubulin 2, partial [Gossypium hirsutum]
Length = 163
Score = 194 bits (494), Expect = 9e-62
Identities = 98/99 (98%), Positives = 99/99 (100%)
Frame = -1
Query: 299 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLD 120
VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLD
Sbjct: 11 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 70
Query: 119 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 3
IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT
Sbjct: 71 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 109
>ACJ37364.1 alpha tubulin, partial [Garcinia mangostana]
Length = 164
Score = 194 bits (494), Expect = 9e-62
Identities = 98/99 (98%), Positives = 99/99 (100%)
Frame = -1
Query: 299 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLD 120
VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLD
Sbjct: 2 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 61
Query: 119 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 3
IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT
Sbjct: 62 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 100
>ABF46823.1 putative tubulin alpha-1 chain, partial [Fagus sylvatica]
Length = 212
Score = 196 bits (497), Expect = 2e-61
Identities = 99/99 (100%), Positives = 99/99 (100%)
Frame = -1
Query: 299 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLD 120
VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLD
Sbjct: 20 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLD 79
Query: 119 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 3
IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT
Sbjct: 80 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 118
>ABB82561.1 alpha-tubulin, partial [Primula vulgaris]
Length = 166
Score = 194 bits (492), Expect = 2e-61
Identities = 98/99 (98%), Positives = 99/99 (100%)
Frame = -1
Query: 299 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLD 120
VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSL+
Sbjct: 15 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLN 74
Query: 119 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 3
IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT
Sbjct: 75 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 113
>ABF46824.1 putative tubulin alpha 1 chain, partial [Fagus sylvatica]
Length = 212
Score = 194 bits (494), Expect = 4e-61
Identities = 98/99 (98%), Positives = 99/99 (100%)
Frame = -1
Query: 299 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLD 120
VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLD
Sbjct: 20 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 79
Query: 119 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 3
IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT
Sbjct: 80 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 118
>JAU36689.1 Tubulin alpha-1 chain, partial [Noccaea caerulescens]
Length = 108
Score = 190 bits (483), Expect = 7e-61
Identities = 92/99 (92%), Positives = 99/99 (100%)
Frame = -1
Query: 299 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLD 120
VDYGKKSKLGFTVYPSPQVST+VVEPYNSVLSTHSLLEHTDV+V+LDNEA+YDICRRSLD
Sbjct: 2 VDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRSLD 61
Query: 119 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 3
IERPTYTNLNRL++QVISSLTASLRFDGALNVD+TEFQT
Sbjct: 62 IERPTYTNLNRLIAQVISSLTASLRFDGALNVDITEFQT 100
>AFK78039.1 alpha-tubulin, partial [Moringa oleifera]
Length = 241
Score = 194 bits (494), Expect = 1e-60
Identities = 98/99 (98%), Positives = 99/99 (100%)
Frame = -1
Query: 299 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLD 120
VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLD
Sbjct: 55 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 114
Query: 119 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 3
IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT
Sbjct: 115 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 153
>ANC98504.1 alpha-tubulin, partial [Paeonia suffruticosa]
Length = 242
Score = 194 bits (494), Expect = 1e-60
Identities = 98/99 (98%), Positives = 99/99 (100%)
Frame = -1
Query: 299 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLD 120
VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLD
Sbjct: 133 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 192
Query: 119 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 3
IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT
Sbjct: 193 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 231
>ABH06366.1 alpha-tubulin, partial [Sorbus aucuparia]
Length = 257
Score = 194 bits (494), Expect = 2e-60
Identities = 98/99 (98%), Positives = 99/99 (100%)
Frame = -1
Query: 299 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLD 120
VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLD
Sbjct: 13 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 72
Query: 119 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 3
IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT
Sbjct: 73 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 111
>CBI29424.3 unnamed protein product, partial [Vitis vinifera]
Length = 287
Score = 194 bits (494), Expect = 4e-60
Identities = 98/99 (98%), Positives = 99/99 (100%)
Frame = -1
Query: 299 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLD 120
VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLD
Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 218
Query: 119 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 3
IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT
Sbjct: 219 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 257
>SIP56163.1 alpha-tubulin isoform 6, partial [Sticholonche zanclea]
Length = 141
Score = 189 bits (480), Expect = 6e-60
Identities = 94/99 (94%), Positives = 98/99 (98%)
Frame = -1
Query: 299 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLD 120
VDYGKKSKL FTVYPSPQVST+VVEPYNSVLSTHSLLEHTDV+V+LDNEAIYDICRRSLD
Sbjct: 12 VDYGKKSKLAFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAIYDICRRSLD 71
Query: 119 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 3
IERPTYTNLNRLV+QVISSLTASLRFDGALNVDVTEFQT
Sbjct: 72 IERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQT 110
>JAU27438.1 Tubulin alpha chain, partial [Noccaea caerulescens]
Length = 174
Score = 190 bits (483), Expect = 6e-60
Identities = 92/99 (92%), Positives = 99/99 (100%)
Frame = -1
Query: 299 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLD 120
VDYGKKSKLGFT+YPSPQVST+VVEPYNS+LSTHSLLEHTDV+V+LDNEAIYDICRR+LD
Sbjct: 33 VDYGKKSKLGFTIYPSPQVSTAVVEPYNSILSTHSLLEHTDVAVMLDNEAIYDICRRNLD 92
Query: 119 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 3
IERPTYTNLNRL+SQVISSLTASLRFDGALNVDVTEFQT
Sbjct: 93 IERPTYTNLNRLISQVISSLTASLRFDGALNVDVTEFQT 131
>BAG70024.1 alpha tubulin, partial [Salicornia europaea]
Length = 216
Score = 191 bits (486), Expect = 8e-60
Identities = 94/99 (94%), Positives = 98/99 (98%)
Frame = -1
Query: 299 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLD 120
VDYGKKSKLGFT+YPSPQ+STSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLD
Sbjct: 21 VDYGKKSKLGFTIYPSPQISTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 80
Query: 119 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 3
IERPTYTNLNRL+SQVISSLTASLRFDGALNVDV EFQT
Sbjct: 81 IERPTYTNLNRLISQVISSLTASLRFDGALNVDVNEFQT 119
>AAN33000.1 alpha-tubulin 4, partial [Gossypium hirsutum]
Length = 311
Score = 194 bits (494), Expect = 8e-60
Identities = 98/99 (98%), Positives = 99/99 (100%)
Frame = -1
Query: 299 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLD 120
VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLD
Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 218
Query: 119 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 3
IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT
Sbjct: 219 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 257
>ACN40426.1 unknown [Picea sitchensis]
Length = 319
Score = 194 bits (494), Expect = 1e-59
Identities = 98/99 (98%), Positives = 99/99 (100%)
Frame = -1
Query: 299 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLD 120
VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLD
Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 218
Query: 119 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 3
IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT
Sbjct: 219 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 257
>XP_002263822.3 PREDICTED: tubulin alpha chain, partial [Vitis vinifera]
Length = 323
Score = 194 bits (494), Expect = 1e-59
Identities = 98/99 (98%), Positives = 99/99 (100%)
Frame = -1
Query: 299 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLD 120
VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLD
Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 218
Query: 119 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 3
IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT
Sbjct: 219 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 257
>ANQ69425.1 alpha-tubulin, partial [Avena fatua]
Length = 263
Score = 192 bits (489), Expect = 1e-59
Identities = 97/99 (97%), Positives = 98/99 (98%)
Frame = -1
Query: 299 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLD 120
VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLD
Sbjct: 75 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 134
Query: 119 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 3
IERPTYTNLNRLVSQVISSLTASLRFDGALNVDV EFQT
Sbjct: 135 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQT 173
>JAU33729.1 Tubulin alpha chain, partial [Noccaea caerulescens] JAU73094.1
Tubulin alpha chain, partial [Noccaea caerulescens]
Length = 200
Score = 190 bits (483), Expect = 1e-59
Identities = 92/99 (92%), Positives = 99/99 (100%)
Frame = -1
Query: 299 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLD 120
VDYGKKSKLGFT+YPSPQVST+VVEPYNS+LSTHSLLEHTDV+V+LDNEAIYDICRR+LD
Sbjct: 59 VDYGKKSKLGFTIYPSPQVSTAVVEPYNSILSTHSLLEHTDVAVMLDNEAIYDICRRNLD 118
Query: 119 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 3
IERPTYTNLNRL+SQVISSLTASLRFDGALNVDVTEFQT
Sbjct: 119 IERPTYTNLNRLISQVISSLTASLRFDGALNVDVTEFQT 157
>XP_015873042.1 PREDICTED: tubulin alpha chain-like, partial [Ziziphus jujuba]
Length = 338
Score = 194 bits (494), Expect = 2e-59
Identities = 98/99 (98%), Positives = 99/99 (100%)
Frame = -1
Query: 299 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLD 120
VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLD
Sbjct: 64 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 123
Query: 119 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 3
IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT
Sbjct: 124 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 162
>KJB58759.1 hypothetical protein B456_009G224800 [Gossypium raimondii]
Length = 340
Score = 194 bits (494), Expect = 2e-59
Identities = 98/99 (98%), Positives = 99/99 (100%)
Frame = -1
Query: 299 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLD 120
VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLD
Sbjct: 49 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 108
Query: 119 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 3
IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT
Sbjct: 109 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQT 147