BLASTX nr result

ID: Panax24_contig00003862 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00003862
         (394 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017258503.1 PREDICTED: eukaryotic translation initiation fact...    59   3e-10
KZM89858.1 hypothetical protein DCAR_022779 [Daucus carota subsp...    59   3e-10
XP_016468039.1 PREDICTED: eukaryotic translation initiation fact...    43   8e-08
XP_009781677.1 PREDICTED: eukaryotic translation initiation fact...    43   8e-08
XP_015062020.1 PREDICTED: eukaryotic translation initiation fact...    43   1e-07
XP_019232467.1 PREDICTED: eukaryotic translation initiation fact...    43   1e-07
XP_009610664.1 PREDICTED: eukaryotic translation initiation fact...    43   1e-07
KVH88158.1 Plant specific eukaryotic initiation factor 4B [Cynar...    46   1e-07
XP_006359720.1 PREDICTED: eukaryotic translation initiation fact...    43   1e-07
XP_004231006.1 PREDICTED: eukaryotic translation initiation fact...    43   2e-07
XP_016539913.1 PREDICTED: eukaryotic translation initiation fact...    42   4e-07
KZV53453.1 eukaryotic translation initiation factor 3 subunit A ...    41   9e-07
XP_011092882.1 PREDICTED: eukaryotic translation initiation fact...    43   9e-07
KZV41115.1 eukaryotic translation initiation factor 3 subunit A ...    43   1e-06
KVH96002.1 Plant specific eukaryotic initiation factor 4B [Cynar...    42   1e-06
XP_019165525.1 PREDICTED: eukaryotic translation initiation fact...    41   2e-06
EPS72390.1 hypothetical protein M569_02372, partial [Genlisea au...    44   3e-06
KZN03359.1 hypothetical protein DCAR_012115 [Daucus carota subsp...    53   4e-06
XP_017239984.1 PREDICTED: eukaryotic translation initiation fact...    53   7e-06

>XP_017258503.1 PREDICTED: eukaryotic translation initiation factor 4B3 isoform X1
           [Daucus carota subsp. sativus] XP_017258504.1 PREDICTED:
           eukaryotic translation initiation factor 4B3 isoform X2
           [Daucus carota subsp. sativus]
          Length = 381

 Score = 58.5 bits (140), Expect(2) = 3e-10
 Identities = 37/62 (59%), Positives = 38/62 (61%)
 Frame = -3

Query: 188 NWGXXXXXEGRKFGAFDSLRERRXXXXXXXXXXXXXXXXXGKKREEVGSGGVRPKLNLQP 9
           NWG     EGRKFGAFDSLRERR                 GKKRE+VGS  VRPKLNLQP
Sbjct: 210 NWGKKKEEEGRKFGAFDSLRERR-------GGGFERDESWGKKREDVGS--VRPKLNLQP 260

Query: 8   RK 3
           RK
Sbjct: 261 RK 262



 Score = 33.5 bits (75), Expect(2) = 3e-10
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = -2

Query: 327 EPRRQGSDESDSWVSNKSFVPSEGRRYD 244
           E  +  +DESD+W +NKS+VPSE R+Y+
Sbjct: 168 ENSQSKADESDNWGANKSYVPSE-RKYE 194


>KZM89858.1 hypothetical protein DCAR_022779 [Daucus carota subsp. sativus]
          Length = 365

 Score = 58.5 bits (140), Expect(2) = 3e-10
 Identities = 37/62 (59%), Positives = 38/62 (61%)
 Frame = -3

Query: 188 NWGXXXXXEGRKFGAFDSLRERRXXXXXXXXXXXXXXXXXGKKREEVGSGGVRPKLNLQP 9
           NWG     EGRKFGAFDSLRERR                 GKKRE+VGS  VRPKLNLQP
Sbjct: 210 NWGKKKEEEGRKFGAFDSLRERR-------GGGFERDESWGKKREDVGS--VRPKLNLQP 260

Query: 8   RK 3
           RK
Sbjct: 261 RK 262



 Score = 33.5 bits (75), Expect(2) = 3e-10
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = -2

Query: 327 EPRRQGSDESDSWVSNKSFVPSEGRRYD 244
           E  +  +DESD+W +NKS+VPSE R+Y+
Sbjct: 168 ENSQSKADESDNWGANKSYVPSE-RKYE 194


>XP_016468039.1 PREDICTED: eukaryotic translation initiation factor 4B3-like
           [Nicotiana tabacum]
          Length = 415

 Score = 43.1 bits (100), Expect(2) = 8e-08
 Identities = 26/50 (52%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -3

Query: 149 GAFDSLRERRXXXXXXXXXXXXXXXXXGKKREEV--GSGGVRPKLNLQPR 6
           GAFDSLRERR                   KREE   G GG RPKLNLQPR
Sbjct: 239 GAFDSLRERRGGGYESNNSGVDSENWGRGKREETLGGGGGGRPKLNLQPR 288



 Score = 40.4 bits (93), Expect(2) = 8e-08
 Identities = 16/22 (72%), Positives = 20/22 (90%)
 Frame = -2

Query: 309 SDESDSWVSNKSFVPSEGRRYD 244
           +DESD+W +NKSFVPS GRR+D
Sbjct: 193 ADESDNWGANKSFVPSSGRRFD 214


>XP_009781677.1 PREDICTED: eukaryotic translation initiation factor 4B [Nicotiana
           sylvestris]
          Length = 415

 Score = 43.1 bits (100), Expect(2) = 8e-08
 Identities = 26/50 (52%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = -3

Query: 149 GAFDSLRERRXXXXXXXXXXXXXXXXXGKKREEV--GSGGVRPKLNLQPR 6
           GAFDSLRERR                   KREE   G GG RPKLNLQPR
Sbjct: 239 GAFDSLRERRGGGYESNNSGVDSENWGRGKREETLGGGGGGRPKLNLQPR 288



 Score = 40.4 bits (93), Expect(2) = 8e-08
 Identities = 16/22 (72%), Positives = 20/22 (90%)
 Frame = -2

Query: 309 SDESDSWVSNKSFVPSEGRRYD 244
           +DESD+W +NKSFVPS GRR+D
Sbjct: 193 ADESDNWGANKSFVPSSGRRFD 214


>XP_015062020.1 PREDICTED: eukaryotic translation initiation factor 4B3 [Solanum
           pennellii]
          Length = 422

 Score = 42.7 bits (99), Expect(2) = 1e-07
 Identities = 30/58 (51%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
 Frame = -3

Query: 161 GRKF----GAFDSLRERRXXXXXXXXXXXXXXXXXGKKREE--VGSGGVRPKLNLQPR 6
           GR+F    GAFDSLRERR                  KKREE  V +GG RPKLNLQPR
Sbjct: 242 GRRFASGGGAFDSLRERRGGYDSNGGVDSENWG---KKREENGVSAGGGRPKLNLQPR 296



 Score = 40.4 bits (93), Expect(2) = 1e-07
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = -2

Query: 309 SDESDSWVSNKSFVPSEGRRYD 244
           +DESD+W +NK+FVPS GRR+D
Sbjct: 195 ADESDNWAANKAFVPSSGRRFD 216


>XP_019232467.1 PREDICTED: eukaryotic translation initiation factor 4B3 [Nicotiana
           attenuata] OIT28017.1 eukaryotic translation initiation
           factor 4b3 [Nicotiana attenuata]
          Length = 416

 Score = 42.7 bits (99), Expect(2) = 1e-07
 Identities = 26/51 (50%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -3

Query: 149 GAFDSLRERRXXXXXXXXXXXXXXXXXGKKREEV---GSGGVRPKLNLQPR 6
           GAFDSLRERR                   KREE    G GG RPKLNLQPR
Sbjct: 239 GAFDSLRERRGGGYESNNSGVDSENWGRGKREETLGGGGGGGRPKLNLQPR 289



 Score = 40.4 bits (93), Expect(2) = 1e-07
 Identities = 16/22 (72%), Positives = 20/22 (90%)
 Frame = -2

Query: 309 SDESDSWVSNKSFVPSEGRRYD 244
           +DESD+W +NKSFVPS GRR+D
Sbjct: 193 ADESDNWGANKSFVPSSGRRFD 214


>XP_009610664.1 PREDICTED: eukaryotic translation initiation factor 4B3 [Nicotiana
           tomentosiformis] XP_016506262.1 PREDICTED: eukaryotic
           translation initiation factor 4B3-like [Nicotiana
           tabacum]
          Length = 416

 Score = 42.7 bits (99), Expect(2) = 1e-07
 Identities = 26/51 (50%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -3

Query: 149 GAFDSLRERRXXXXXXXXXXXXXXXXXGKKREEV---GSGGVRPKLNLQPR 6
           GAFDSLRERR                   KREE    G GG RPKLNLQPR
Sbjct: 239 GAFDSLRERRGGGYESNNSGVDSENWGRGKREETLGGGGGGGRPKLNLQPR 289



 Score = 40.4 bits (93), Expect(2) = 1e-07
 Identities = 16/22 (72%), Positives = 20/22 (90%)
 Frame = -2

Query: 309 SDESDSWVSNKSFVPSEGRRYD 244
           +DESD+W +NKSFVPS GRR+D
Sbjct: 193 ADESDNWGANKSFVPSSGRRFD 214


>KVH88158.1 Plant specific eukaryotic initiation factor 4B [Cynara cardunculus
           var. scolymus]
          Length = 756

 Score = 46.2 bits (108), Expect(2) = 1e-07
 Identities = 33/66 (50%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
 Frame = -3

Query: 188 NWGXXXXXE--GRKFGAFDSLRERRXXXXXXXXXXXXXXXXXGKKREEV--GSGGVRPKL 21
           NWG        G   GAFDSLRERR                  KKREEV  G GG RPKL
Sbjct: 234 NWGKKKEVRFGGGGGGAFDSLRERRGGNDSSDSDNWG------KKREEVSVGGGGGRPKL 287

Query: 20  NLQPRK 3
           NLQPRK
Sbjct: 288 NLQPRK 293



 Score = 36.6 bits (83), Expect(2) = 1e-07
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = -2

Query: 309 SDESDSWVSNKSFVPSEGRR 250
           +DES+SW SNKS+ PSEGRR
Sbjct: 192 ADESNSWGSNKSYTPSEGRR 211


>XP_006359720.1 PREDICTED: eukaryotic translation initiation factor 4B3-like
           [Solanum tuberosum]
          Length = 452

 Score = 42.7 bits (99), Expect(2) = 1e-07
 Identities = 30/58 (51%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
 Frame = -3

Query: 161 GRKF----GAFDSLRERRXXXXXXXXXXXXXXXXXGKKREE--VGSGGVRPKLNLQPR 6
           GR+F    GAFDSLRERR                  KKREE  V +GG RPKLNLQPR
Sbjct: 267 GRRFASGGGAFDSLRERRGGYDSNGGVDSENWG---KKREENGVSAGGGRPKLNLQPR 321



 Score = 40.0 bits (92), Expect(2) = 1e-07
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = -2

Query: 306 DESDSWVSNKSFVPSEGRRYD 244
           DESD+W +NK+FVPS GRR+D
Sbjct: 221 DESDNWAANKAFVPSSGRRFD 241


>XP_004231006.1 PREDICTED: eukaryotic translation initiation factor 4B3 [Solanum
           lycopersicum]
          Length = 422

 Score = 42.7 bits (99), Expect(2) = 2e-07
 Identities = 30/58 (51%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
 Frame = -3

Query: 161 GRKF----GAFDSLRERRXXXXXXXXXXXXXXXXXGKKREE--VGSGGVRPKLNLQPR 6
           GR+F    GAFDSLRERR                  KKREE  V +GG RPKLNLQPR
Sbjct: 242 GRRFASGGGAFDSLRERRGGYDSNGGVDSENWG---KKREENGVSAGGGRPKLNLQPR 296



 Score = 39.3 bits (90), Expect(2) = 2e-07
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = -2

Query: 309 SDESDSWVSNKSFVPSEGRRYD 244
           +DESD+W +NK+FVPS GRR+D
Sbjct: 195 ADESDNWGANKAFVPSSGRRFD 216


>XP_016539913.1 PREDICTED: eukaryotic translation initiation factor 4B3 [Capsicum
           annuum]
          Length = 420

 Score = 41.6 bits (96), Expect(2) = 4e-07
 Identities = 29/59 (49%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
 Frame = -3

Query: 161 GRKF----GAFDSLRERRXXXXXXXXXXXXXXXXXGKKREEVG---SGGVRPKLNLQPR 6
           GR+F    GAFDSLRERR                  +KREE G    GG RPKLNLQPR
Sbjct: 238 GRRFASGGGAFDSLRERRGGYDSNGGGVDSENWG--RKREETGVAGGGGGRPKLNLQPR 294



 Score = 39.7 bits (91), Expect(2) = 4e-07
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = -2

Query: 309 SDESDSWVSNKSFVPSEGRRYD 244
           +DESD+W +NK+FVPS GRR+D
Sbjct: 191 ADESDNWAANKAFVPSGGRRFD 212


>KZV53453.1 eukaryotic translation initiation factor 3 subunit A [Dorcoceras
           hygrometricum]
          Length = 465

 Score = 40.8 bits (94), Expect(2) = 9e-07
 Identities = 28/62 (45%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = -3

Query: 188 NWGXXXXXEGRKFG-AFDSLRERRXXXXXXXXXXXXXXXXXGKKREEVGSGGVRPKLNLQ 12
           NWG      GRK G AFDSLRERR                  K+ EE G  G RP+LNL+
Sbjct: 209 NWGD-----GRKAGGAFDSLRERRGVTESNGIDSDTWGR---KREEESGGSGGRPRLNLK 260

Query: 11  PR 6
           PR
Sbjct: 261 PR 262



 Score = 39.3 bits (90), Expect(2) = 9e-07
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = -2

Query: 309 SDESDSWVSNKSFVPSEGRRYD 244
           +D+SD+W +NKSFVPSE RRY+
Sbjct: 177 ADDSDNWAANKSFVPSETRRYE 198


>XP_011092882.1 PREDICTED: eukaryotic translation initiation factor 4B-like
           [Sesamum indicum]
          Length = 399

 Score = 43.1 bits (100), Expect(2) = 9e-07
 Identities = 30/62 (48%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = -3

Query: 188 NWGXXXXXEGRKFG-AFDSLRERRXXXXXXXXXXXXXXXXXGKKREEVGSGGVRPKLNLQ 12
           NW      EGRK G AFDSLRER+                  +KREE G+GG RP+LNLQ
Sbjct: 220 NWVKRKEEEGRKTGGAFDSLRERKGGFESNRVDSESWG----RKREE-GNGGSRPRLNLQ 274

Query: 11  PR 6
           PR
Sbjct: 275 PR 276



 Score = 37.0 bits (84), Expect(2) = 9e-07
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = -2

Query: 309 SDESDSWVSNKSFVPSEGRRYD 244
           +DE D+W S KSFVPSE RRY+
Sbjct: 181 ADEVDNWASKKSFVPSEPRRYE 202


>KZV41115.1 eukaryotic translation initiation factor 3 subunit A [Dorcoceras
           hygrometricum]
          Length = 402

 Score = 43.1 bits (100), Expect(2) = 1e-06
 Identities = 29/62 (46%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = -3

Query: 188 NWGXXXXXEGRKFG-AFDSLRERRXXXXXXXXXXXXXXXXXGKKREEVGSGGVRPKLNLQ 12
           NW      EGRK G +FDSLRERR                  +KREEV +G  RP+LNLQ
Sbjct: 221 NWLKRKEEEGRKTGGSFDSLRERRGGFESNGADSESWG----RKREEVTNGSGRPRLNLQ 276

Query: 11  PR 6
           PR
Sbjct: 277 PR 278



 Score = 36.6 bits (83), Expect(2) = 1e-06
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = -2

Query: 327 EPRRQGSDESDSWVSNKSFVPSEGRRYD 244
           E  +  +DE D+W S KSFVPSE ++YD
Sbjct: 176 EDLQSRADEVDNWTSKKSFVPSEPKKYD 203


>KVH96002.1 Plant specific eukaryotic initiation factor 4B [Cynara cardunculus
           var. scolymus]
          Length = 401

 Score = 42.0 bits (97), Expect(2) = 1e-06
 Identities = 31/67 (46%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
 Frame = -3

Query: 188 NWGXXXXXEGRKFG-----AFDSLRERRXXXXXXXXXXXXXXXXXGKKREEVGSGGVRPK 24
           NWG     E R+FG     AFDSLRE+                  G+KREE   GG RPK
Sbjct: 224 NWGKKKEEEARRFGGGGGGAFDSLREK------GSGNELPDSDNWGRKREEA-IGGSRPK 276

Query: 23  LNLQPRK 3
           LNLQPRK
Sbjct: 277 LNLQPRK 283



 Score = 37.4 bits (85), Expect(2) = 1e-06
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = -2

Query: 309 SDESDSWVSNKSFVPSEGRR 250
           +DESD WVSNKS+ P EGRR
Sbjct: 190 ADESDRWVSNKSYTPPEGRR 209


>XP_019165525.1 PREDICTED: eukaryotic translation initiation factor 4B3-like
           [Ipomoea nil]
          Length = 396

 Score = 41.2 bits (95), Expect(2) = 2e-06
 Identities = 29/61 (47%), Positives = 34/61 (55%)
 Frame = -3

Query: 188 NWGXXXXXEGRKFGAFDSLRERRXXXXXXXXXXXXXXXXXGKKREEVGSGGVRPKLNLQP 9
           NW      EGRKFGAFDSLRE+R                 G+KR++  S G RP+LNLQP
Sbjct: 228 NWTKRKEDEGRKFGAFDSLREKR-------MNNVSEPEAWGRKRDD--SNG-RPRLNLQP 277

Query: 8   R 6
           R
Sbjct: 278 R 278



 Score = 37.7 bits (86), Expect(2) = 2e-06
 Identities = 15/22 (68%), Positives = 19/22 (86%)
 Frame = -2

Query: 309 SDESDSWVSNKSFVPSEGRRYD 244
           +D SD+W +NKSFVPSEGRR +
Sbjct: 191 ADGSDNWAANKSFVPSEGRRIE 212


>EPS72390.1 hypothetical protein M569_02372, partial [Genlisea aurea]
          Length = 375

 Score = 43.9 bits (102), Expect(2) = 3e-06
 Identities = 29/63 (46%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = -3

Query: 188 NWGXXXXXEGRKF--GAFDSLRERRXXXXXXXXXXXXXXXXXGKKREEVGSGGVRPKLNL 15
           +W      EGRK   GAFDSLRERR                  +++EEV  GG RPKLNL
Sbjct: 224 SWMKRKEEEGRKVVGGAFDSLRERRGGGFEPSRVDSDNWG---RRKEEVSIGGSRPKLNL 280

Query: 14  QPR 6
           QPR
Sbjct: 281 QPR 283



 Score = 34.3 bits (77), Expect(2) = 3e-06
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = -2

Query: 309 SDESDSWVSNKSFVPSEGRRYD 244
           +DE D+W S+KSFVPS+ RR D
Sbjct: 185 ADEVDNWASSKSFVPSDPRRND 206


>KZN03359.1 hypothetical protein DCAR_012115 [Daucus carota subsp. sativus]
          Length = 167

 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 35/62 (56%), Positives = 37/62 (59%)
 Frame = -3

Query: 188 NWGXXXXXEGRKFGAFDSLRERRXXXXXXXXXXXXXXXXXGKKREEVGSGGVRPKLNLQP 9
           NWG      GRKFGAFDSLRERR                 GKK+E+VGS  VRPKLNLQP
Sbjct: 13  NWGKKEEE-GRKFGAFDSLRERR-------GGGFERDESWGKKKEDVGS--VRPKLNLQP 62

Query: 8   RK 3
           RK
Sbjct: 63  RK 64


>XP_017239984.1 PREDICTED: eukaryotic translation initiation factor 4B3-like
           [Daucus carota subsp. sativus]
          Length = 202

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 35/62 (56%), Positives = 37/62 (59%)
 Frame = -3

Query: 188 NWGXXXXXEGRKFGAFDSLRERRXXXXXXXXXXXXXXXXXGKKREEVGSGGVRPKLNLQP 9
           NWG      GRKFGAFDSLRERR                 GKK+E+VGS  VRPKLNLQP
Sbjct: 13  NWGKKEEE-GRKFGAFDSLRERR-------GGGFERDESWGKKKEDVGS--VRPKLNLQP 62

Query: 8   RK 3
           RK
Sbjct: 63  RK 64


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