BLASTX nr result
ID: Panax24_contig00003822
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00003822
(610 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP68472.1 Retrovirus-related Pol polyprotein from transposon TN... 157 2e-69
ABF97393.1 retrotransposon protein, putative, Ty1-copia subclass... 158 4e-68
AAR06328.1 putative polyprotein [Oryza sativa Japonica Group] 158 4e-68
BAA22288.1 polyprotein [Oryza australiensis] 159 5e-68
ABA98367.2 retrotransposon protein, putative, Ty1-copia subclass... 158 7e-68
ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass... 158 4e-67
AAP44605.1 putative polyprotein [Oryza sativa Japonica Group] 158 4e-67
ABA99022.2 retrotransposon protein, putative, Ty1-copia subclass... 151 1e-66
AAM74249.1 Putative retroelement [Oryza sativa Japonica Group] 156 1e-65
AAP52343.2 retrotransposon protein, putative, Ty1-copia subclass... 156 1e-65
AAC26250.1 contains similarity to reverse transcriptase (Pfam: r... 158 5e-65
ABA97705.1 retrotransposon protein, putative, Ty1-copia subclass... 148 1e-64
AAL83352.1 Putative polyprotein [Oryza sativa Japonica Group] AA... 149 2e-63
ADB85429.1 putative retrotransposon protein [Phyllostachys edulis] 154 5e-63
CAN64055.1 hypothetical protein VITISV_044406 [Vitis vinifera] 135 3e-62
ABF97213.1 retrotransposon protein, putative, Ty1-copia subclass... 152 9e-62
AAS01945.1 putative polyprotein [Oryza sativa Japonica Group] 152 9e-62
XP_017233167.1 PREDICTED: uncharacterized protein LOC108207215, ... 139 2e-61
EXX50149.1 gag-pol fusion protein [Rhizophagus irregularis DAOM ... 143 3e-61
CAN69397.1 hypothetical protein VITISV_021035 [Vitis vinifera] 134 1e-60
>KYP68472.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 676
Score = 157 bits (398), Expect(2) = 2e-69
Identities = 76/104 (73%), Positives = 90/104 (86%)
Frame = +1
Query: 298 LKQASRRWNIRFDETIKEFNFIKNEDEPCVYKEVSGNAVSFLILYVDDILLIGNDILMLQ 477
LKQASR WNI+F++TIK F+F++ E+EPCVYK VSG+ + FL+LYVDDILLIGNDI LQ
Sbjct: 493 LKQASRSWNIQFNKTIKNFDFVRCEEEPCVYKRVSGSTIIFLMLYVDDILLIGNDIPSLQ 552
Query: 478 SIKIWLSKHFSMKDLGEASHILGIKIYRDRSKRMFDLSQGTYID 609
S KIWLS+ FSMKDLGEA++ILGIKIYRDRSKRM LSQ YI+
Sbjct: 553 STKIWLSEQFSMKDLGEAAYILGIKIYRDRSKRMLGLSQSMYIN 596
Score = 133 bits (334), Expect(2) = 2e-69
Identities = 60/77 (77%), Positives = 71/77 (92%)
Frame = +2
Query: 41 VSPPEGIKPIGCKWVFKRKTGADGKVETYKARLVAKGFKQRQGVDYDETFSPVAMLKSIR 220
V + IKPIGCKWV+K+K GADGKVETYKARLVAKG++Q++G+DYDETFSP+AMLKSIR
Sbjct: 376 VEASKDIKPIGCKWVYKKKIGADGKVETYKARLVAKGYRQKEGIDYDETFSPMAMLKSIR 435
Query: 221 ILLAIATYHNYEIWQMD 271
ILLAIA Y++YEIWQMD
Sbjct: 436 ILLAIAAYYDYEIWQMD 452
>ABF97393.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1073
Score = 158 bits (399), Expect(2) = 4e-68
Identities = 76/104 (73%), Positives = 89/104 (85%)
Frame = +1
Query: 298 LKQASRRWNIRFDETIKEFNFIKNEDEPCVYKEVSGNAVSFLILYVDDILLIGNDILMLQ 477
LKQASR WNIRFDE +K F+KNE+EPCVYK++SG+A+ FLILYVDDILLIGNDI ML+
Sbjct: 877 LKQASRSWNIRFDELVKALGFLKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLE 936
Query: 478 SIKIWLSKHFSMKDLGEASHILGIKIYRDRSKRMFDLSQGTYID 609
S+K L FSMKDLGEA++ILGI+IYRDRSKR+ LSQ TYID
Sbjct: 937 SVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYID 980
Score = 128 bits (321), Expect(2) = 4e-68
Identities = 62/89 (69%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
Frame = +2
Query: 8 LEFRDANNIIN-VSPPEGIKPIGCKWVFKRKTGADGKVETYKARLVAKGFKQRQGVDYDE 184
+E N + N V PP+G+K I CKWVFK+KT DG V YKARLVAKGF+Q QGVDYDE
Sbjct: 748 IESMHVNQVWNLVDPPDGVKAIECKWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDE 807
Query: 185 TFSPVAMLKSIRILLAIATYHNYEIWQMD 271
TFSPVAMLKSIRI+LAIA Y +YEIWQM+
Sbjct: 808 TFSPVAMLKSIRIVLAIAAYFDYEIWQME 836
>AAR06328.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1063
Score = 158 bits (399), Expect(2) = 4e-68
Identities = 76/104 (73%), Positives = 89/104 (85%)
Frame = +1
Query: 298 LKQASRRWNIRFDETIKEFNFIKNEDEPCVYKEVSGNAVSFLILYVDDILLIGNDILMLQ 477
LKQASR WNIRFDE +K F+KNE+EPCVYK++SG+A+ FLILYVDDILLIGNDI ML+
Sbjct: 867 LKQASRSWNIRFDELVKALGFLKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLE 926
Query: 478 SIKIWLSKHFSMKDLGEASHILGIKIYRDRSKRMFDLSQGTYID 609
S+K L FSMKDLGEA++ILGI+IYRDRSKR+ LSQ TYID
Sbjct: 927 SVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYID 970
Score = 128 bits (321), Expect(2) = 4e-68
Identities = 62/89 (69%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
Frame = +2
Query: 8 LEFRDANNIIN-VSPPEGIKPIGCKWVFKRKTGADGKVETYKARLVAKGFKQRQGVDYDE 184
+E N + N V PP+G+K I CKWVFK+KT DG V YKARLVAKGF+Q QGVDYDE
Sbjct: 738 IESMHVNQVWNLVDPPDGVKAIECKWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDE 797
Query: 185 TFSPVAMLKSIRILLAIATYHNYEIWQMD 271
TFSPVAMLKSIRI+LAIA Y +YEIWQM+
Sbjct: 798 TFSPVAMLKSIRIVLAIAAYFDYEIWQME 826
>BAA22288.1 polyprotein [Oryza australiensis]
Length = 1317
Score = 159 bits (402), Expect(2) = 5e-68
Identities = 79/104 (75%), Positives = 89/104 (85%)
Frame = +1
Query: 298 LKQASRRWNIRFDETIKEFNFIKNEDEPCVYKEVSGNAVSFLILYVDDILLIGNDILMLQ 477
LKQASR WNIRFDE IK F FIKNE+E CVYK+VSG+A+ FLILYVDDILLIGNDI ML+
Sbjct: 947 LKQASRSWNIRFDEVIKGFGFIKNEEEACVYKKVSGSAIVFLILYVDDILLIGNDIPMLE 1006
Query: 478 SIKIWLSKHFSMKDLGEASHILGIKIYRDRSKRMFDLSQGTYID 609
S+K L FSMKDLGEA++ILGI+IYRDRSKR+ LSQ TYID
Sbjct: 1007 SVKSSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYID 1050
Score = 126 bits (317), Expect(2) = 5e-68
Identities = 59/77 (76%), Positives = 65/77 (84%)
Frame = +2
Query: 41 VSPPEGIKPIGCKWVFKRKTGADGKVETYKARLVAKGFKQRQGVDYDETFSPVAMLKSIR 220
V PP+G+K I CKW+FK+K DG V YKARLVAKGFKQ QGVDYDETFSPVAMLKSIR
Sbjct: 830 VDPPDGVKTIECKWLFKKKADMDGNVHIYKARLVAKGFKQIQGVDYDETFSPVAMLKSIR 889
Query: 221 ILLAIATYHNYEIWQMD 271
I+LAIA Y +YEIWQMD
Sbjct: 890 IILAIAAYFDYEIWQMD 906
>ABA98367.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1745
Score = 158 bits (399), Expect(2) = 7e-68
Identities = 75/104 (72%), Positives = 89/104 (85%)
Frame = +1
Query: 298 LKQASRRWNIRFDETIKEFNFIKNEDEPCVYKEVSGNAVSFLILYVDDILLIGNDILMLQ 477
LKQASR WNIRFDE +K F+KNE+EPCVYK++SG+A+ FLILYVDDILLIGNDI ML+
Sbjct: 1411 LKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLE 1470
Query: 478 SIKIWLSKHFSMKDLGEASHILGIKIYRDRSKRMFDLSQGTYID 609
S+K L FSMKDLGEA++I+GI+IYRDRSKR+ LSQ TYID
Sbjct: 1471 SVKTSLKNSFSMKDLGEAAYIMGIRIYRDRSKRLIGLSQSTYID 1514
Score = 127 bits (319), Expect(2) = 7e-68
Identities = 62/89 (69%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
Frame = +2
Query: 8 LEFRDANNIIN-VSPPEGIKPIGCKWVFKRKTGADGKVETYKARLVAKGFKQRQGVDYDE 184
+E N + N V PP+G+K I CKWVFK+KT DG V YKARLVAKGF+Q QGVDYDE
Sbjct: 1304 IESMHVNQVWNLVDPPDGVKAIECKWVFKKKTYVDGNVHIYKARLVAKGFRQIQGVDYDE 1363
Query: 185 TFSPVAMLKSIRILLAIATYHNYEIWQMD 271
TFSPVAMLKSI+I+LAIA Y +YEIWQMD
Sbjct: 1364 TFSPVAMLKSIQIVLAIAAYFDYEIWQMD 1392
>ABF97047.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 158 bits (399), Expect(2) = 4e-67
Identities = 76/104 (73%), Positives = 89/104 (85%)
Frame = +1
Query: 298 LKQASRRWNIRFDETIKEFNFIKNEDEPCVYKEVSGNAVSFLILYVDDILLIGNDILMLQ 477
LKQASR WNIRFDE +K F+KNE+EPCVYK++SG+A+ FLILYVDDILLIGNDI ML+
Sbjct: 896 LKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLE 955
Query: 478 SIKIWLSKHFSMKDLGEASHILGIKIYRDRSKRMFDLSQGTYID 609
S+K L FSMKDLGEA++ILGI+IYRDRSKR+ LSQ TYID
Sbjct: 956 SVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYID 999
Score = 124 bits (312), Expect(2) = 4e-67
Identities = 60/89 (67%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
Frame = +2
Query: 8 LEFRDANNIIN-VSPPEGIKPIGCKWVFKRKTGADGKVETYKARLVAKGFKQRQGVDYDE 184
+E N + N V PP+G+K I CKW+FK+ T DG V Y ARLVAKGF+Q QGVDYDE
Sbjct: 767 IESMHVNQVWNLVDPPDGVKAIECKWIFKKMTDVDGTVHIYNARLVAKGFRQIQGVDYDE 826
Query: 185 TFSPVAMLKSIRILLAIATYHNYEIWQMD 271
TFSPVAMLKSIRI+LAIA Y +YEIWQMD
Sbjct: 827 TFSPVAMLKSIRIVLAIAAYFDYEIWQMD 855
>AAP44605.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 158 bits (399), Expect(2) = 4e-67
Identities = 76/104 (73%), Positives = 89/104 (85%)
Frame = +1
Query: 298 LKQASRRWNIRFDETIKEFNFIKNEDEPCVYKEVSGNAVSFLILYVDDILLIGNDILMLQ 477
LKQASR WNIRFDE +K F+KNE+EPCVYK++SG+A+ FLILYVDDILLIGNDI ML+
Sbjct: 809 LKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLE 868
Query: 478 SIKIWLSKHFSMKDLGEASHILGIKIYRDRSKRMFDLSQGTYID 609
S+K L FSMKDLGEA++ILGI+IYRDRSKR+ LSQ TYID
Sbjct: 869 SVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYID 912
Score = 124 bits (312), Expect(2) = 4e-67
Identities = 60/89 (67%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
Frame = +2
Query: 8 LEFRDANNIIN-VSPPEGIKPIGCKWVFKRKTGADGKVETYKARLVAKGFKQRQGVDYDE 184
+E N + N V PP+G+K I CKW+FK+ T DG V Y ARLVAKGF+Q QGVDYDE
Sbjct: 680 IESMHVNQVWNLVDPPDGVKAIECKWIFKKMTDVDGTVHIYNARLVAKGFRQIQGVDYDE 739
Query: 185 TFSPVAMLKSIRILLAIATYHNYEIWQMD 271
TFSPVAMLKSIRI+LAIA Y +YEIWQMD
Sbjct: 740 TFSPVAMLKSIRIVLAIAAYFDYEIWQMD 768
>ABA99022.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 829
Score = 151 bits (382), Expect(2) = 1e-66
Identities = 72/98 (73%), Positives = 85/98 (86%)
Frame = +1
Query: 298 LKQASRRWNIRFDETIKEFNFIKNEDEPCVYKEVSGNAVSFLILYVDDILLIGNDILMLQ 477
LKQASR WNIRFDE +K F+KNE+EPCVYK++SG+A+ FLILYVDDILLIGNDILML+
Sbjct: 732 LKQASRSWNIRFDEVVKALRFVKNEEEPCVYKKISGSALVFLILYVDDILLIGNDILMLE 791
Query: 478 SIKIWLSKHFSMKDLGEASHILGIKIYRDRSKRMFDLS 591
S+K L FSMKDLGEA++ILGI+IYRDRSKR+ LS
Sbjct: 792 SVKTSLKNRFSMKDLGEAAYILGIRIYRDRSKRLIGLS 829
Score = 129 bits (325), Expect(2) = 1e-66
Identities = 63/89 (70%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
Frame = +2
Query: 8 LEFRDANNIIN-VSPPEGIKPIGCKWVFKRKTGADGKVETYKARLVAKGFKQRQGVDYDE 184
+E N + N V PP+G+K I CKWVFK+KT DG V YKARLVAKGF+Q QGVDYDE
Sbjct: 603 IESMHVNQVWNLVDPPDGVKAIECKWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDE 662
Query: 185 TFSPVAMLKSIRILLAIATYHNYEIWQMD 271
TFSP AMLKSIRI+LAIA Y NYEIWQMD
Sbjct: 663 TFSPFAMLKSIRIVLAIAAYFNYEIWQMD 691
>AAM74249.1 Putative retroelement [Oryza sativa Japonica Group]
Length = 700
Score = 156 bits (395), Expect(2) = 1e-65
Identities = 75/104 (72%), Positives = 89/104 (85%)
Frame = +1
Query: 298 LKQASRRWNIRFDETIKEFNFIKNEDEPCVYKEVSGNAVSFLILYVDDILLIGNDILMLQ 477
LKQASR WNIRFDE IK F+KNE+EPCVYK+++G+A+ FLILYVDDILLIGNDI ML+
Sbjct: 501 LKQASRSWNIRFDEVIKALGFVKNEEEPCVYKKINGSALMFLILYVDDILLIGNDIPMLE 560
Query: 478 SIKIWLSKHFSMKDLGEASHILGIKIYRDRSKRMFDLSQGTYID 609
S+K L FSMKDLGEA++ILGI+IYRDRSKR+ LSQ TYI+
Sbjct: 561 SVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIN 604
Score = 121 bits (304), Expect(2) = 1e-65
Identities = 60/89 (67%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
Frame = +2
Query: 8 LEFRDANNIIN-VSPPEGIKPIGCKWVFKRKTGADGKVETYKARLVAKGFKQRQGVDYDE 184
+E N + N V P + +K I CKWVFK+KT DG V YKARLVAKGF+Q QGV+YDE
Sbjct: 372 IESMHVNQVWNLVDPLDSVKAIECKWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVNYDE 431
Query: 185 TFSPVAMLKSIRILLAIATYHNYEIWQMD 271
TFSPVAMLKSIRI+LAIA Y +YEIWQMD
Sbjct: 432 TFSPVAMLKSIRIVLAIAAYFDYEIWQMD 460
>AAP52343.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 655
Score = 156 bits (395), Expect(2) = 1e-65
Identities = 75/104 (72%), Positives = 89/104 (85%)
Frame = +1
Query: 298 LKQASRRWNIRFDETIKEFNFIKNEDEPCVYKEVSGNAVSFLILYVDDILLIGNDILMLQ 477
LKQASR WNIRFDE IK F+KNE+EPCVYK+++G+A+ FLILYVDDILLIGNDI ML+
Sbjct: 456 LKQASRSWNIRFDEVIKALGFVKNEEEPCVYKKINGSALMFLILYVDDILLIGNDIPMLE 515
Query: 478 SIKIWLSKHFSMKDLGEASHILGIKIYRDRSKRMFDLSQGTYID 609
S+K L FSMKDLGEA++ILGI+IYRDRSKR+ LSQ TYI+
Sbjct: 516 SVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIN 559
Score = 121 bits (304), Expect(2) = 1e-65
Identities = 60/89 (67%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
Frame = +2
Query: 8 LEFRDANNIIN-VSPPEGIKPIGCKWVFKRKTGADGKVETYKARLVAKGFKQRQGVDYDE 184
+E N + N V P + +K I CKWVFK+KT DG V YKARLVAKGF+Q QGV+YDE
Sbjct: 327 IESMHVNQVWNLVDPLDSVKAIECKWVFKKKTDVDGNVHIYKARLVAKGFRQIQGVNYDE 386
Query: 185 TFSPVAMLKSIRILLAIATYHNYEIWQMD 271
TFSPVAMLKSIRI+LAIA Y +YEIWQMD
Sbjct: 387 TFSPVAMLKSIRIVLAIAAYFDYEIWQMD 415
>AAC26250.1 contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana] CAB80804.1 putative
retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 158 bits (400), Expect(2) = 5e-65
Identities = 73/104 (70%), Positives = 91/104 (87%)
Frame = +1
Query: 298 LKQASRRWNIRFDETIKEFNFIKNEDEPCVYKEVSGNAVSFLILYVDDILLIGNDILMLQ 477
LKQASR WN+RF+E IKEF+FI+NE+EPCVYK+ SG+AV+FL+LYVDDILL+GNDI +LQ
Sbjct: 594 LKQASRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSGSAVAFLVLYVDDILLLGNDIPLLQ 653
Query: 478 SIKIWLSKHFSMKDLGEASHILGIKIYRDRSKRMFDLSQGTYID 609
S+K WL FSMKD+GEA++ILGI+IYRDR ++ LSQ TYID
Sbjct: 654 SVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQDTYID 697
Score = 117 bits (293), Expect(2) = 5e-65
Identities = 52/77 (67%), Positives = 64/77 (83%)
Frame = +2
Query: 41 VSPPEGIKPIGCKWVFKRKTGADGKVETYKARLVAKGFKQRQGVDYDETFSPVAMLKSIR 220
V P+G+KPI CKW+FK+K DG ++ YKA LVAKG+KQ G+DYDET+SPVAMLKSIR
Sbjct: 477 VDLPDGVKPIECKWIFKKKIDMDGNIQIYKAGLVAKGYKQVHGIDYDETYSPVAMLKSIR 536
Query: 221 ILLAIATYHNYEIWQMD 271
ILLA A +++YEIWQMD
Sbjct: 537 ILLATAAHYDYEIWQMD 553
>ABA97705.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 810
Score = 148 bits (373), Expect(2) = 1e-64
Identities = 71/104 (68%), Positives = 86/104 (82%)
Frame = +1
Query: 298 LKQASRRWNIRFDETIKEFNFIKNEDEPCVYKEVSGNAVSFLILYVDDILLIGNDILMLQ 477
LK+ASR WNIRFD+ +K F+KNE+EPCVYK++SG+A+ FLILYVD+ILLIGNDI ML+
Sbjct: 653 LKKASRSWNIRFDKVVKALGFVKNEEEPCVYKKISGSALVFLILYVDEILLIGNDIPMLE 712
Query: 478 SIKIWLSKHFSMKDLGEASHILGIKIYRDRSKRMFDLSQGTYID 609
S+K L F MKDLGE + ILGI+IYRDRSKR+ LSQ TYID
Sbjct: 713 SVKTSLKNSFLMKDLGEPTCILGIRIYRDRSKRLIGLSQSTYID 756
Score = 126 bits (316), Expect(2) = 1e-64
Identities = 61/89 (68%), Positives = 69/89 (77%), Gaps = 1/89 (1%)
Frame = +2
Query: 8 LEFRDANNIIN-VSPPEGIKPIGCKWVFKRKTGADGKVETYKARLVAKGFKQRQGVDYDE 184
+E N + N V PP+G+K I CKWVFK+ T DG V YKARLVAKGF+Q QGVDYDE
Sbjct: 524 IESMHVNQVWNLVDPPDGVKAIKCKWVFKKNTDVDGNVHIYKARLVAKGFRQIQGVDYDE 583
Query: 185 TFSPVAMLKSIRILLAIATYHNYEIWQMD 271
TFSPVAMLKSIRI+L IA Y +YEIWQMD
Sbjct: 584 TFSPVAMLKSIRIVLTIAAYFDYEIWQMD 612
>AAL83352.1 Putative polyprotein [Oryza sativa Japonica Group] AAN04499.1
Putative polyprotein [Oryza sativa Japonica Group]
AAP51930.1 retrotransposon protein, putative, Ty1-copia
subclass [Oryza sativa Japonica Group]
Length = 309
Score = 149 bits (377), Expect(2) = 2e-63
Identities = 73/104 (70%), Positives = 87/104 (83%)
Frame = +1
Query: 298 LKQASRRWNIRFDETIKEFNFIKNEDEPCVYKEVSGNAVSFLILYVDDILLIGNDILMLQ 477
LKQAS W+IRFDE +K F+KNE+EP VYK++SGNA+ FLILYVDDILLIGNDI ML+
Sbjct: 134 LKQASWSWDIRFDEVVKALGFVKNEEEPRVYKKISGNALVFLILYVDDILLIGNDIPMLE 193
Query: 478 SIKIWLSKHFSMKDLGEASHILGIKIYRDRSKRMFDLSQGTYID 609
S+K L FS+KDLGEA++ILGI+IYRDRSKR+ LSQ TYID
Sbjct: 194 SVKTSLKNSFSVKDLGEAAYILGIRIYRDRSKRLIGLSQSTYID 237
Score = 121 bits (303), Expect(2) = 2e-63
Identities = 57/92 (61%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
Frame = +2
Query: 8 LEFRDANNIINV-SPPEGIKPIGCKWVFKRKTGADGKVETYKARLVAKGFKQRQGVDYDE 184
+E N + N+ PP+G+K I CKWVFK+KT DG ++ YK RLVAKGF+Q QGVDYDE
Sbjct: 5 IESMHVNQVWNLLDPPDGVKAIECKWVFKKKTDVDGNIQIYKTRLVAKGFRQIQGVDYDE 64
Query: 185 TFSPVAMLKSIRILLAIATYHNYEIWQMDTTI 280
TFSPV MLKSI+I+LAIA Y NYEIW ++ I
Sbjct: 65 TFSPVTMLKSIQIVLAIAAYFNYEIWLVNVKI 96
>ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 154 bits (389), Expect(2) = 5e-63
Identities = 75/104 (72%), Positives = 87/104 (83%)
Frame = +1
Query: 298 LKQASRRWNIRFDETIKEFNFIKNEDEPCVYKEVSGNAVSFLILYVDDILLIGNDILMLQ 477
LKQASR WNIRFDE IK F F+KN++EPCVY +VSG+ + LILYVDDILLIGNDI ML+
Sbjct: 943 LKQASRSWNIRFDEEIKRFGFVKNKEEPCVYMKVSGSTLVILILYVDDILLIGNDIPMLE 1002
Query: 478 SIKIWLSKHFSMKDLGEASHILGIKIYRDRSKRMFDLSQGTYID 609
S+K L FSMKDLGEA++ILGIKIYRDRS+R+ LSQ TYID
Sbjct: 1003 SVKASLKNSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYID 1046
Score = 115 bits (287), Expect(2) = 5e-63
Identities = 54/77 (70%), Positives = 63/77 (81%)
Frame = +2
Query: 41 VSPPEGIKPIGCKWVFKRKTGADGKVETYKARLVAKGFKQRQGVDYDETFSPVAMLKSIR 220
V P +G+K I CKW++K+K DG V +KARLVAKGF+Q QGVDYDETFS VAMLKSIR
Sbjct: 826 VDPLDGVKTIECKWIYKKKIDMDGNVHIHKARLVAKGFRQVQGVDYDETFSLVAMLKSIR 885
Query: 221 ILLAIATYHNYEIWQMD 271
I+LAIA Y +YEIWQMD
Sbjct: 886 IILAIAAYFDYEIWQMD 902
>CAN64055.1 hypothetical protein VITISV_044406 [Vitis vinifera]
Length = 633
Score = 135 bits (341), Expect(2) = 3e-62
Identities = 68/104 (65%), Positives = 79/104 (75%)
Frame = +1
Query: 298 LKQASRRWNIRFDETIKEFNFIKNEDEPCVYKEVSGNAVSFLILYVDDILLIGNDILMLQ 477
LKQASR WN FD+TIK F F + DE CVYK+ +G V FL+LYVDDILLIGN I ML
Sbjct: 262 LKQASRSWNTCFDQTIKTFGFDQCHDESCVYKKWNGKKVVFLVLYVDDILLIGNCIGMLT 321
Query: 478 SIKIWLSKHFSMKDLGEASHILGIKIYRDRSKRMFDLSQGTYID 609
S+K WLS+ F MKDLGEA+HILGIK+ R+R K+M LSQ YID
Sbjct: 322 SVKDWLSQRFDMKDLGEAAHILGIKLMRNRKKKMIGLSQALYID 365
Score = 130 bits (328), Expect(2) = 3e-62
Identities = 56/77 (72%), Positives = 69/77 (89%)
Frame = +2
Query: 41 VSPPEGIKPIGCKWVFKRKTGADGKVETYKARLVAKGFKQRQGVDYDETFSPVAMLKSIR 220
V PP+G+KPIGCKW++K+K G DGK +TYKA LVAKG+ Q++G+DY+ETFSPVAMLKSIR
Sbjct: 145 VEPPKGVKPIGCKWIYKKKRGIDGKXZTYKAXLVAKGYTQKEGIDYEETFSPVAMLKSIR 204
Query: 221 ILLAIATYHNYEIWQMD 271
ILL+IA Y +YEIWQMD
Sbjct: 205 ILLSIAAYFDYEIWQMD 221
>ABF97213.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 152 bits (384), Expect(2) = 9e-62
Identities = 73/104 (70%), Positives = 87/104 (83%)
Frame = +1
Query: 298 LKQASRRWNIRFDETIKEFNFIKNEDEPCVYKEVSGNAVSFLILYVDDILLIGNDILMLQ 477
LKQASR WNIRFDE +K F+KNE+ PCVYK++SG+A+ FLILYVDDILLIGNDI ML+
Sbjct: 870 LKQASRSWNIRFDEVVKALGFVKNEEVPCVYKKISGSALVFLILYVDDILLIGNDIPMLE 929
Query: 478 SIKIWLSKHFSMKDLGEASHILGIKIYRDRSKRMFDLSQGTYID 609
S+ I L FSMKDLGEA++ILGI+IYRD SKR+ LS+ TYID
Sbjct: 930 SVNISLKNSFSMKDLGEAAYILGIRIYRDGSKRLIGLSESTYID 973
Score = 112 bits (281), Expect(2) = 9e-62
Identities = 53/71 (74%), Positives = 59/71 (83%)
Frame = +2
Query: 59 IKPIGCKWVFKRKTGADGKVETYKARLVAKGFKQRQGVDYDETFSPVAMLKSIRILLAIA 238
++ I CKW FK+KT DG V YKARLVAKGF+Q QGVDYDETF PVAMLKSIRI+LAIA
Sbjct: 759 LRAIECKWFFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFLPVAMLKSIRIVLAIA 818
Query: 239 TYHNYEIWQMD 271
Y +YEIWQMD
Sbjct: 819 AYFDYEIWQMD 829
>AAS01945.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1084
Score = 152 bits (384), Expect(2) = 9e-62
Identities = 73/104 (70%), Positives = 87/104 (83%)
Frame = +1
Query: 298 LKQASRRWNIRFDETIKEFNFIKNEDEPCVYKEVSGNAVSFLILYVDDILLIGNDILMLQ 477
LKQASR WNIRFDE +K F+KNE+ PCVYK++SG+A+ FLILYVDDILLIGNDI ML+
Sbjct: 812 LKQASRSWNIRFDEVVKALGFVKNEEVPCVYKKISGSALVFLILYVDDILLIGNDIPMLE 871
Query: 478 SIKIWLSKHFSMKDLGEASHILGIKIYRDRSKRMFDLSQGTYID 609
S+ I L FSMKDLGEA++ILGI+IYRD SKR+ LS+ TYID
Sbjct: 872 SVNISLKNSFSMKDLGEAAYILGIRIYRDGSKRLIGLSESTYID 915
Score = 112 bits (281), Expect(2) = 9e-62
Identities = 53/71 (74%), Positives = 59/71 (83%)
Frame = +2
Query: 59 IKPIGCKWVFKRKTGADGKVETYKARLVAKGFKQRQGVDYDETFSPVAMLKSIRILLAIA 238
++ I CKW FK+KT DG V YKARLVAKGF+Q QGVDYDETF PVAMLKSIRI+LAIA
Sbjct: 701 LRAIECKWFFKKKTDVDGNVHIYKARLVAKGFRQIQGVDYDETFLPVAMLKSIRIVLAIA 760
Query: 239 TYHNYEIWQMD 271
Y +YEIWQMD
Sbjct: 761 AYFDYEIWQMD 771
>XP_017233167.1 PREDICTED: uncharacterized protein LOC108207215, partial [Daucus
carota subsp. sativus]
Length = 3860
Score = 139 bits (351), Expect(2) = 2e-61
Identities = 68/104 (65%), Positives = 79/104 (75%)
Frame = +1
Query: 298 LKQASRRWNIRFDETIKEFNFIKNEDEPCVYKEVSGNAVSFLILYVDDILLIGNDILMLQ 477
LKQASR WNIRFD+ ++ + F + E CVYK GNAV FL+LYVDDILLIGN++ ML
Sbjct: 1099 LKQASRYWNIRFDQAVQSYGFDQCPSEACVYKRCEGNAVVFLVLYVDDILLIGNNVKMLS 1158
Query: 478 SIKIWLSKHFSMKDLGEASHILGIKIYRDRSKRMFDLSQGTYID 609
SIK WL K F MKDLGEA++ILGIK+ RDR KRM LSQ YID
Sbjct: 1159 SIKAWLFKQFEMKDLGEAAYILGIKLIRDRKKRMLALSQEPYID 1202
Score = 139 bits (351), Expect(2) = 2e-61
Identities = 68/104 (65%), Positives = 79/104 (75%)
Frame = +1
Query: 298 LKQASRRWNIRFDETIKEFNFIKNEDEPCVYKEVSGNAVSFLILYVDDILLIGNDILMLQ 477
LKQASR WNIRFD+ ++ + F + E CVYK GNAV FL+LYVDDILLIGN++ ML
Sbjct: 2314 LKQASRYWNIRFDQAVQSYGFDQCPSEACVYKRCEGNAVVFLVLYVDDILLIGNNVKMLS 2373
Query: 478 SIKIWLSKHFSMKDLGEASHILGIKIYRDRSKRMFDLSQGTYID 609
SIK WL K F MKDLGEA++ILGIK+ RDR KRM LSQ YID
Sbjct: 2374 SIKAWLFKQFEMKDLGEAAYILGIKLIRDRKKRMLALSQEPYID 2417
Score = 139 bits (351), Expect(2) = 2e-61
Identities = 68/104 (65%), Positives = 79/104 (75%)
Frame = +1
Query: 298 LKQASRRWNIRFDETIKEFNFIKNEDEPCVYKEVSGNAVSFLILYVDDILLIGNDILMLQ 477
LKQASR WNIRFD+ ++ + F + E CVYK GNAV FL+LYVDDILLIGN++ ML
Sbjct: 3529 LKQASRYWNIRFDQAVQSYGFDQCPSEACVYKRCEGNAVVFLVLYVDDILLIGNNVKMLS 3588
Query: 478 SIKIWLSKHFSMKDLGEASHILGIKIYRDRSKRMFDLSQGTYID 609
SIK WL K F MKDLGEA++ILGIK+ RDR KRM LSQ YID
Sbjct: 3589 SIKAWLFKQFEMKDLGEAAYILGIKLIRDRKKRMLALSQEPYID 3632
Score = 124 bits (310), Expect(2) = 2e-61
Identities = 54/77 (70%), Positives = 69/77 (89%)
Frame = +2
Query: 41 VSPPEGIKPIGCKWVFKRKTGADGKVETYKARLVAKGFKQRQGVDYDETFSPVAMLKSIR 220
V PP+G+KPIGCKWV+K+K G+D KV+ +KARLVAKG+ Q++G+DY+ETFSPV MLKSIR
Sbjct: 982 VEPPKGVKPIGCKWVYKKKRGSDKKVKAWKARLVAKGYTQKEGIDYEETFSPVVMLKSIR 1041
Query: 221 ILLAIATYHNYEIWQMD 271
ILL+IA + +YEIWQMD
Sbjct: 1042 ILLSIAAHLDYEIWQMD 1058
Score = 124 bits (310), Expect(2) = 2e-61
Identities = 54/77 (70%), Positives = 69/77 (89%)
Frame = +2
Query: 41 VSPPEGIKPIGCKWVFKRKTGADGKVETYKARLVAKGFKQRQGVDYDETFSPVAMLKSIR 220
V PP+G+KPIGCKWV+K+K G+D KV+ +KARLVAKG+ Q++G+DY+ETFSPV MLKSIR
Sbjct: 2197 VEPPKGVKPIGCKWVYKKKRGSDKKVKAWKARLVAKGYTQKEGIDYEETFSPVVMLKSIR 2256
Query: 221 ILLAIATYHNYEIWQMD 271
ILL+IA + +YEIWQMD
Sbjct: 2257 ILLSIAAHLDYEIWQMD 2273
Score = 124 bits (310), Expect(2) = 2e-61
Identities = 54/77 (70%), Positives = 69/77 (89%)
Frame = +2
Query: 41 VSPPEGIKPIGCKWVFKRKTGADGKVETYKARLVAKGFKQRQGVDYDETFSPVAMLKSIR 220
V PP+G+KPIGCKWV+K+K G+D KV+ +KARLVAKG+ Q++G+DY+ETFSPV MLKSIR
Sbjct: 3412 VEPPKGVKPIGCKWVYKKKRGSDKKVKAWKARLVAKGYTQKEGIDYEETFSPVVMLKSIR 3471
Query: 221 ILLAIATYHNYEIWQMD 271
ILL+IA + +YEIWQMD
Sbjct: 3472 ILLSIAAHLDYEIWQMD 3488
>EXX50149.1 gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
Length = 1303
Score = 143 bits (360), Expect(2) = 3e-61
Identities = 67/104 (64%), Positives = 84/104 (80%)
Frame = +1
Query: 298 LKQASRRWNIRFDETIKEFNFIKNEDEPCVYKEVSGNAVSFLILYVDDILLIGNDILMLQ 477
LKQASR WN+ F E +KEF F ++EDE CVY + SG+ V+FL+LYVDDILL+GNDI LQ
Sbjct: 930 LKQASRSWNLCFHEKVKEFGFSRSEDESCVYVKASGSIVTFLVLYVDDILLMGNDIPTLQ 989
Query: 478 SIKIWLSKHFSMKDLGEASHILGIKIYRDRSKRMFDLSQGTYID 609
+K WL K F+MKDLGEA++ILGI+I RDR KR+ LSQGTY++
Sbjct: 990 DVKAWLGKCFAMKDLGEAAYILGIRILRDRKKRLIGLSQGTYLE 1033
Score = 120 bits (300), Expect(2) = 3e-61
Identities = 56/81 (69%), Positives = 67/81 (82%)
Frame = +2
Query: 29 NIINVSPPEGIKPIGCKWVFKRKTGADGKVETYKARLVAKGFKQRQGVDYDETFSPVAML 208
N+++ P G K +GCKW+FK+KT DGKV T+KARLVAKGF Q GVDYDETFSPVA +
Sbjct: 811 NLVDNVP--GRKTVGCKWIFKKKTDMDGKVHTFKARLVAKGFTQTPGVDYDETFSPVAKI 868
Query: 209 KSIRILLAIATYHNYEIWQMD 271
KSIRI+LAIA +H+YEIWQMD
Sbjct: 869 KSIRIMLAIAAFHDYEIWQMD 889
>CAN69397.1 hypothetical protein VITISV_021035 [Vitis vinifera]
Length = 668
Score = 134 bits (338), Expect(2) = 1e-60
Identities = 64/104 (61%), Positives = 78/104 (75%)
Frame = +1
Query: 298 LKQASRRWNIRFDETIKEFNFIKNEDEPCVYKEVSGNAVSFLILYVDDILLIGNDILMLQ 477
LKQASR WNI F+E IK + F +N EPCVYK++ G+ V FL+LYVDDILLIGND+ L
Sbjct: 297 LKQASRSWNIIFNEAIKSYGFEQNLGEPCVYKQIGGDKVVFLVLYVDDILLIGNDVESLS 356
Query: 478 SIKIWLSKHFSMKDLGEASHILGIKIYRDRSKRMFDLSQGTYID 609
+K WL+ F MKDLGEAS+ILGI++ RDR R+ LSQ YID
Sbjct: 357 KVKNWLASQFQMKDLGEASYILGIQMTRDRKNRLLALSQAAYID 400
Score = 126 bits (317), Expect(2) = 1e-60
Identities = 57/77 (74%), Positives = 68/77 (88%)
Frame = +2
Query: 41 VSPPEGIKPIGCKWVFKRKTGADGKVETYKARLVAKGFKQRQGVDYDETFSPVAMLKSIR 220
V PEGIKPIGCKW++K K G +GKVET+KARLVAKGF Q++GVDY++TFSPV MLKSIR
Sbjct: 180 VDLPEGIKPIGCKWIYKXKRGPNGKVETFKARLVAKGFTQKEGVDYEDTFSPVXMLKSIR 239
Query: 221 ILLAIATYHNYEIWQMD 271
ILL+I Y++YEIWQMD
Sbjct: 240 ILLSIXAYYDYEIWQMD 256