BLASTX nr result
ID: Panax24_contig00003809
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00003809
(562 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
NP_001077530.1 glyceraldehyde-3-phosphate dehydrogenase C2 [Arab... 71 5e-23
KZV57693.1 glyceraldehyde-3-phosphate dehydrogenase, cytosolic-l... 71 5e-23
EGV96717.1 Glyceraldehyde-3-phosphate dehydrogenase [Cricetulus ... 54 3e-14
XP_013778976.1 PREDICTED: glyceraldehyde-3-phosphate dehydrogena... 54 3e-14
OAY69445.1 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic, ... 58 5e-14
OBS75797.1 hypothetical protein A6R68_17750 [Neotoma lepida] 52 8e-14
AIZ07788.1 glyceraldehyde 3-phosphate dehydrogenase, partial [Gy... 72 7e-13
AIZ07785.1 glyceraldehyde 3-phosphate dehydrogenase, partial [Gy... 72 7e-13
OBS80106.1 hypothetical protein A6R68_21691 [Neotoma lepida] 52 9e-13
KHG14985.1 Glyceraldehyde-3-phosphate dehydrogenase [Gossypium a... 55 9e-13
KRY02656.1 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic, ... 71 1e-12
ERE83416.1 glyceraldehyde-3-phosphate dehydrogenase [Cricetulus ... 52 1e-12
XP_009598907.1 PREDICTED: pre-mRNA-processing factor 19-like, pa... 75 2e-12
XP_016566047.1 PREDICTED: pre-mRNA-processing factor 19 [Capsicu... 75 2e-12
XP_016444626.1 PREDICTED: pre-mRNA-processing factor 19 homolog ... 75 2e-12
XP_015088133.1 PREDICTED: pre-mRNA-processing factor 19 [Solanum... 75 2e-12
XP_006354435.1 PREDICTED: pre-mRNA-processing factor 19 [Solanum... 75 2e-12
XP_004247768.1 PREDICTED: pre-mRNA-processing factor 19 [Solanum... 75 2e-12
GAU18532.1 hypothetical protein TSUD_325210 [Trifolium subterran... 74 2e-12
BAD42359.1 D-glyceraldehyde-3-phosphate dehydrogenase, partial [... 72 2e-12
>NP_001077530.1 glyceraldehyde-3-phosphate dehydrogenase C2 [Arabidopsis thaliana]
AEE29017.1 glyceraldehyde-3-phosphate dehydrogenase C2
[Arabidopsis thaliana]
Length = 310
Score = 70.9 bits (172), Expect(2) = 5e-23
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +3
Query: 273 HPEEIPWGEAEADFVVECTGVFTDKDKTAAHLKGGAK 383
+PE+IPWGEA ADFVVE TGVFTDKDK AAHLKGGAK
Sbjct: 85 NPEDIPWGEAGADFVVESTGVFTDKDKAAAHLKGGAK 121
Score = 64.3 bits (155), Expect(2) = 5e-23
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = +2
Query: 413 KTVDGPSSKDWRGGRAASFNIIPSSTGAAKA 505
KTVDGPS KDWRGGRAASFNIIPSSTGAAKA
Sbjct: 162 KTVDGPSMKDWRGGRAASFNIIPSSTGAAKA 192
>KZV57693.1 glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like
[Dorcoceras hygrometricum]
Length = 294
Score = 70.9 bits (172), Expect(2) = 5e-23
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +3
Query: 273 HPEEIPWGEAEADFVVECTGVFTDKDKTAAHLKGGAK 383
+PEEIPWGEA AD+VVE TGVFTDKDK AAHLKGGAK
Sbjct: 83 NPEEIPWGEAGADYVVESTGVFTDKDKAAAHLKGGAK 119
Score = 64.3 bits (155), Expect(2) = 5e-23
Identities = 30/31 (96%), Positives = 30/31 (96%)
Frame = +2
Query: 413 KTVDGPSSKDWRGGRAASFNIIPSSTGAAKA 505
KTVDGPS KDWRGGRAASFNIIPSSTGAAKA
Sbjct: 145 KTVDGPSMKDWRGGRAASFNIIPSSTGAAKA 175
>EGV96717.1 Glyceraldehyde-3-phosphate dehydrogenase [Cricetulus griseus]
Length = 278
Score = 54.3 bits (129), Expect(2) = 3e-14
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = +3
Query: 276 PEEIPWGEAEADFVVECTGVFTDKDKTAAHLKGGAK 383
P I WG+A A++VVE TG+FT +KT AHLKGGAK
Sbjct: 80 PSNIKWGDAGAEYVVESTGIFTTMEKTGAHLKGGAK 115
Score = 51.2 bits (121), Expect(2) = 3e-14
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +2
Query: 395 AIKQRLKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAYDGMIVGEHSR 538
AI KTVDGPS K W GR A+ NIIP+STGAA+A G ++ E +R
Sbjct: 150 AITATQKTVDGPSGKLWSDGRGAAQNIIPASTGAARAV-GKVIPEQNR 196
>XP_013778976.1 PREDICTED: glyceraldehyde-3-phosphate dehydrogenase 2-like [Limulus
polyphemus]
Length = 256
Score = 54.3 bits (129), Expect(2) = 3e-14
Identities = 27/42 (64%), Positives = 31/42 (73%)
Frame = +2
Query: 395 AIKQRLKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAYDGMI 520
A+ KTVDGPSSK WR GR A+ NIIP+STGAAKA +I
Sbjct: 100 AVTATQKTVDGPSSKAWRDGRGAAQNIIPASTGAAKAVGKVI 141
Score = 51.2 bits (121), Expect(2) = 3e-14
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +3
Query: 276 PEEIPWGEAEADFVVECTGVFTDKDKTAAHLKGGAK 383
P IPWG+A AD+VVE TGVFT +K H++GGAK
Sbjct: 46 PNAIPWGKAGADYVVESTGVFTTIEKAKPHIEGGAK 81
>OAY69445.1 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic, partial
[Ananas comosus]
Length = 213
Score = 58.2 bits (139), Expect(2) = 5e-14
Identities = 24/33 (72%), Positives = 29/33 (87%)
Frame = +3
Query: 273 HPEEIPWGEAEADFVVECTGVFTDKDKTAAHLK 371
+P+EIPWGE A+++VE TGVFTDKDK AAHLK
Sbjct: 85 NPDEIPWGETGAEYIVESTGVFTDKDKAAAHLK 117
Score = 46.6 bits (109), Expect(2) = 5e-14
Identities = 22/37 (59%), Positives = 26/37 (70%), Gaps = 3/37 (8%)
Frame = +2
Query: 425 GPSSKDWRGGRAASFNIIPSSTGAAK---AYDGMIVG 526
GPSSKDWRGGRAA FNIIP++ K A +G + G
Sbjct: 142 GPSSKDWRGGRAAGFNIIPAALAVGKVLPALNGKLTG 178
>OBS75797.1 hypothetical protein A6R68_17750 [Neotoma lepida]
Length = 262
Score = 52.4 bits (124), Expect(2) = 8e-14
Identities = 25/45 (55%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Frame = +3
Query: 276 PEEIPWGEAEADFVVECTGVFTDKDKTAAHLKGGAK--TMDRPSS 404
P I WG+A A++V+E TGVFT +K AHLKGGAK T+ PS+
Sbjct: 80 PANINWGDAGAEYVMESTGVFTTMEKAGAHLKGGAKRVTISTPSA 124
Score = 51.6 bits (122), Expect(2) = 8e-14
Identities = 27/42 (64%), Positives = 29/42 (69%)
Frame = +2
Query: 395 AIKQRLKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAYDGMI 520
AI KTVDGPS K WR GR A+ NIIP STGAAKA +I
Sbjct: 159 AITATQKTVDGPSGKLWRNGRGAAQNIIPVSTGAAKAVGKVI 200
>AIZ07788.1 glyceraldehyde 3-phosphate dehydrogenase, partial [Gymnadenia
conopsea] AIZ07789.1 glyceraldehyde 3-phosphate
dehydrogenase, partial [Gymnadenia x densiflora]
AIZ07790.1 glyceraldehyde 3-phosphate dehydrogenase,
partial [Gymnadenia odoratissima] AIZ07791.1
glyceraldehyde 3-phosphate dehydrogenase, partial
[Gymnadenia odoratissima]
Length = 135
Score = 72.0 bits (175), Expect = 7e-13
Identities = 33/37 (89%), Positives = 34/37 (91%)
Frame = +3
Query: 273 HPEEIPWGEAEADFVVECTGVFTDKDKTAAHLKGGAK 383
+PEEIPWGEA ADFVVE TGVFTDKDK AAHLKGGAK
Sbjct: 1 NPEEIPWGEAGADFVVESTGVFTDKDKAAAHLKGGAK 37
Score = 64.7 bits (156), Expect = 4e-10
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 413 KTVDGPSSKDWRGGRAASFNIIPSSTGAAK 502
KTVDGPSSKDWRGGRAASFNIIPSSTGAAK
Sbjct: 106 KTVDGPSSKDWRGGRAASFNIIPSSTGAAK 135
>AIZ07785.1 glyceraldehyde 3-phosphate dehydrogenase, partial [Gymnadenia
rhellicani]
Length = 135
Score = 72.0 bits (175), Expect = 7e-13
Identities = 33/37 (89%), Positives = 34/37 (91%)
Frame = +3
Query: 273 HPEEIPWGEAEADFVVECTGVFTDKDKTAAHLKGGAK 383
+PEEIPWGEA ADFVVE TGVFTDKDK AAHLKGGAK
Sbjct: 1 NPEEIPWGEAGADFVVESTGVFTDKDKAAAHLKGGAK 37
Score = 64.7 bits (156), Expect = 4e-10
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 413 KTVDGPSSKDWRGGRAASFNIIPSSTGAAK 502
KTVDGPSSKDWRGGRAASFNIIPSSTGAAK
Sbjct: 106 KTVDGPSSKDWRGGRAASFNIIPSSTGAAK 135
>OBS80106.1 hypothetical protein A6R68_21691 [Neotoma lepida]
Length = 302
Score = 52.0 bits (123), Expect(2) = 9e-13
Identities = 23/36 (63%), Positives = 27/36 (75%)
Frame = +3
Query: 276 PEEIPWGEAEADFVVECTGVFTDKDKTAAHLKGGAK 383
P I WG+A A++VVE TGVFT +K AHLKGGAK
Sbjct: 74 PANINWGDAGAEYVVESTGVFTTMEKAGAHLKGGAK 109
Score = 48.5 bits (114), Expect(2) = 9e-13
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = +2
Query: 395 AIKQRLKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAYDGMI 520
AI KTVDGPS K W G A+ NIIP+STGAAKA +I
Sbjct: 145 AITATQKTVDGPSGKLWHDGHGAAQNIIPASTGAAKAVGKVI 186
>KHG14985.1 Glyceraldehyde-3-phosphate dehydrogenase [Gossypium arboreum]
Length = 377
Score = 55.5 bits (132), Expect(2) = 9e-13
Identities = 26/31 (83%), Positives = 26/31 (83%)
Frame = +2
Query: 413 KTVDGPSSKDWRGGRAASFNIIPSSTGAAKA 505
K VDGPS KDWRGGR A NIIPSSTGAAKA
Sbjct: 224 KPVDGPSMKDWRGGRGAGQNIIPSSTGAAKA 254
Score = 45.1 bits (105), Expect(2) = 9e-13
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +3
Query: 276 PEEIPWGEAEADFVVECTGVFTDKDKTAAHLK 371
P EIPWG+ A+FVVE +GVFT K +AHLK
Sbjct: 169 PAEIPWGDYGAEFVVESSGVFTTLAKASAHLK 200
>KRY02656.1 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic, partial
[Trichinella patagoniensis]
Length = 116
Score = 70.9 bits (172), Expect = 1e-12
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +3
Query: 273 HPEEIPWGEAEADFVVECTGVFTDKDKTAAHLKGGAK 383
+PEEIPWGEA AD+VVE TGVFTDKDK AAHLKGGAK
Sbjct: 60 NPEEIPWGEAGADYVVESTGVFTDKDKAAAHLKGGAK 96
>ERE83416.1 glyceraldehyde-3-phosphate dehydrogenase [Cricetulus griseus]
Length = 417
Score = 51.6 bits (122), Expect(2) = 1e-12
Identities = 27/42 (64%), Positives = 29/42 (69%)
Frame = +2
Query: 395 AIKQRLKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAYDGMI 520
AI KTVDGPS K WR GR A NIIP+STGAAKA +I
Sbjct: 92 AITATQKTVDGPSGKLWRDGRGAXQNIIPASTGAAKAVGKVI 133
Score = 48.1 bits (113), Expect(2) = 1e-12
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +3
Query: 276 PEEIPWGEAEADFVVECTGVFTDKDKTAAHLKGGAK 383
P I WG+A A++VVE T +FT +K HLKGGAK
Sbjct: 21 PANIKWGDAGAEYVVESTSIFTTMEKAGVHLKGGAK 56
>XP_009598907.1 PREDICTED: pre-mRNA-processing factor 19-like, partial [Nicotiana
tomentosiformis]
Length = 453
Score = 75.1 bits (183), Expect = 2e-12
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +1
Query: 1 QVADASGSEGYTSAAFHPDGFILGTGTFGSLVKIWDVESQ 120
QVADAS SEGYTSAAFHPDG ILGTGT GSLVKIWDV+SQ
Sbjct: 278 QVADASESEGYTSAAFHPDGLILGTGTSGSLVKIWDVKSQ 317
>XP_016566047.1 PREDICTED: pre-mRNA-processing factor 19 [Capsicum annuum]
Length = 521
Score = 75.1 bits (183), Expect = 2e-12
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +1
Query: 1 QVADASGSEGYTSAAFHPDGFILGTGTFGSLVKIWDVESQ 120
QVADAS SEGYTSAAFHPDG ILGTGT GSLVKIWDV+SQ
Sbjct: 346 QVADASESEGYTSAAFHPDGLILGTGTSGSLVKIWDVKSQ 385
>XP_016444626.1 PREDICTED: pre-mRNA-processing factor 19 homolog 1-like [Nicotiana
tabacum]
Length = 521
Score = 75.1 bits (183), Expect = 2e-12
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +1
Query: 1 QVADASGSEGYTSAAFHPDGFILGTGTFGSLVKIWDVESQ 120
QVADAS SEGYTSAAFHPDG ILGTGT GSLVKIWDV+SQ
Sbjct: 346 QVADASESEGYTSAAFHPDGLILGTGTSGSLVKIWDVKSQ 385
>XP_015088133.1 PREDICTED: pre-mRNA-processing factor 19 [Solanum pennellii]
Length = 521
Score = 75.1 bits (183), Expect = 2e-12
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +1
Query: 1 QVADASGSEGYTSAAFHPDGFILGTGTFGSLVKIWDVESQ 120
QVADAS SEGYTSAAFHPDG ILGTGT GSLVKIWDV+SQ
Sbjct: 346 QVADASESEGYTSAAFHPDGLILGTGTSGSLVKIWDVKSQ 385
>XP_006354435.1 PREDICTED: pre-mRNA-processing factor 19 [Solanum tuberosum]
Length = 521
Score = 75.1 bits (183), Expect = 2e-12
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +1
Query: 1 QVADASGSEGYTSAAFHPDGFILGTGTFGSLVKIWDVESQ 120
QVADAS SEGYTSAAFHPDG ILGTGT GSLVKIWDV+SQ
Sbjct: 346 QVADASESEGYTSAAFHPDGLILGTGTSGSLVKIWDVKSQ 385
>XP_004247768.1 PREDICTED: pre-mRNA-processing factor 19 [Solanum lycopersicum]
Length = 521
Score = 75.1 bits (183), Expect = 2e-12
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = +1
Query: 1 QVADASGSEGYTSAAFHPDGFILGTGTFGSLVKIWDVESQ 120
QVADAS SEGYTSAAFHPDG ILGTGT GSLVKIWDV+SQ
Sbjct: 346 QVADASESEGYTSAAFHPDGLILGTGTSGSLVKIWDVKSQ 385
>GAU18532.1 hypothetical protein TSUD_325210 [Trifolium subterraneum]
Length = 268
Score = 73.6 bits (179), Expect = 2e-12
Identities = 38/55 (69%), Positives = 42/55 (76%)
Frame = +3
Query: 273 HPEEIPWGEAEADFVVECTGVFTDKDKTAAHLKGGAKTMDRPSSKD*RLWMGHQA 437
+PEEIPWGE AD+VVE TGVFTDKDK AAHLK KT+D PSSKD W G +A
Sbjct: 86 NPEEIPWGEVGADYVVESTGVFTDKDKAAAHLK---KTVDGPSSKD---WRGGRA 134
Score = 66.2 bits (160), Expect = 9e-10
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 413 KTVDGPSSKDWRGGRAASFNIIPSSTGAAKA 505
KTVDGPSSKDWRGGRAASFNIIPSSTGAAKA
Sbjct: 119 KTVDGPSSKDWRGGRAASFNIIPSSTGAAKA 149
>BAD42359.1 D-glyceraldehyde-3-phosphate dehydrogenase, partial [Periploca
sepium]
Length = 197
Score = 72.0 bits (175), Expect = 2e-12
Identities = 33/37 (89%), Positives = 34/37 (91%)
Frame = +3
Query: 273 HPEEIPWGEAEADFVVECTGVFTDKDKTAAHLKGGAK 383
+PEEIPWGEA ADFVVE TGVFTDKDK AAHLKGGAK
Sbjct: 33 NPEEIPWGEAGADFVVESTGVFTDKDKAAAHLKGGAK 69
Score = 65.1 bits (157), Expect = 1e-09
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +2
Query: 413 KTVDGPSSKDWRGGRAASFNIIPSSTGAAKA 505
KTVDGPS+KDWRGGRAASFNIIPSSTGAAKA
Sbjct: 138 KTVDGPSAKDWRGGRAASFNIIPSSTGAAKA 168