BLASTX nr result
ID: Panax24_contig00002362
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00002362
(3832 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017229433.1 PREDICTED: RNA-dependent RNA polymerase 6 [Daucus... 1872 0.0
XP_015885879.1 PREDICTED: RNA-dependent RNA polymerase 6 [Ziziph... 1809 0.0
XP_002324295.1 SILENCING DEFECTIVE 1 family protein [Populus tri... 1803 0.0
ACO72600.1 RNA-dependent RNA polymerase 6 [Nicotiana glutinosa] 1797 0.0
XP_002308662.1 SILENCING DEFECTIVE 1 family protein [Populus tri... 1796 0.0
XP_011026450.1 PREDICTED: RNA-dependent RNA polymerase 6-like [P... 1794 0.0
XP_019260524.1 PREDICTED: RNA-dependent RNA polymerase 6 [Nicoti... 1794 0.0
XP_011081567.1 PREDICTED: RNA-dependent RNA polymerase 6 [Sesamu... 1792 0.0
ACA13601.1 RNA-dependent RNA polymerase [Nicotiana attenuata] 1792 0.0
CAR47810.1 RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 1788 0.0
ADI52625.1 RNA-dependent RNA polymerase 6 [Nicotiana tabacum] 1788 0.0
XP_016477231.1 PREDICTED: RNA-dependent RNA polymerase 6 [Nicoti... 1788 0.0
XP_012071453.1 PREDICTED: RNA-dependent RNA polymerase 6-like [J... 1788 0.0
APR63701.1 SILENCING DEFECTIVE family protein 1 [Populus tomentosa] 1787 0.0
XP_009758053.1 PREDICTED: RNA-dependent RNA polymerase 6 [Nicoti... 1787 0.0
XP_012076580.1 PREDICTED: RNA-dependent RNA polymerase 6-like [J... 1787 0.0
NP_001312583.1 RNA-dependent RNA polymerase 6 [Nicotiana tabacum... 1785 0.0
AAU21242.1 putative RNA-dependent RNA polymerase SDE1 [Nicotiana... 1781 0.0
XP_011039698.1 PREDICTED: RNA-dependent RNA polymerase 6-like [P... 1779 0.0
XP_008219491.1 PREDICTED: RNA-dependent RNA polymerase 6 [Prunus... 1778 0.0
>XP_017229433.1 PREDICTED: RNA-dependent RNA polymerase 6 [Daucus carota subsp.
sativus] XP_017229434.1 PREDICTED: RNA-dependent RNA
polymerase 6 [Daucus carota subsp. sativus] KZN10434.1
hypothetical protein DCAR_003090 [Daucus carota subsp.
sativus]
Length = 1200
Score = 1872 bits (4848), Expect = 0.0
Identities = 912/1201 (75%), Positives = 1041/1201 (86%), Gaps = 5/1201 (0%)
Frame = +3
Query: 234 MGSEGSETDTIVTQISVGGFYNYITAKRLSEYFEDNIGGVWRCRLKTSSTPPESFP--DF 407
MGSE SE + +VTQISVGGF TA L EYFE+N+G VWRCRLKTSSTP E++P D
Sbjct: 1 MGSEESERNLVVTQISVGGFDFSTTAMALLEYFENNVGVVWRCRLKTSSTPNEAYPIPDS 60
Query: 408 EINTENIQRTNTYEKVEPHAFVHFVLPDSARAAHNAAGHVELILEKNPLKVSLGPENPHR 587
EI+TE +R N+YE + PHAFVHF +PDSA++A +A+G ELIL+KNPL+V LG NPHR
Sbjct: 61 EIDTEKSKRLNSYENLIPHAFVHFAIPDSAQSAADASGRSELILDKNPLRVRLGAGNPHR 120
Query: 588 MNQRRRTKAPFKLSDVRVEIGTWVSKDKFFVAWRGLPTGVDFLVDPFDGTCKFLFTKDTA 767
MNQ RR KAPFKL DVR+EIG+ VSKD+FFVAWRG PTG DFLVDPFDGTCKFL T+DTA
Sbjct: 121 MNQMRRNKAPFKLPDVRIEIGSRVSKDEFFVAWRGPPTGADFLVDPFDGTCKFLLTRDTA 180
Query: 768 FSFKSTGNHAVIKCNYKVEFLVRDIKEIKQYTDTSHLIILLQLESSPQVYYRTADDDVEE 947
FSF NH+VIKCNYKVEFLVRDI+ IK Y DT+HLI+LL LESSP++YYRTADDD++E
Sbjct: 181 FSFLGFRNHSVIKCNYKVEFLVRDIRWIKNYKDTTHLIVLLHLESSPKLYYRTADDDIKE 240
Query: 948 SVPFDLLDDDDPWIRTTDFTLCGAIGRCSTYRILIPPRHGIKLKKAMKYLLERRVPSENL 1127
SVPFD+LDDDDPWIRTTDFT CGAIGRCS YRILI PR+G+KL+K M+YL E+RV E+L
Sbjct: 241 SVPFDILDDDDPWIRTTDFTACGAIGRCSEYRILIQPRYGMKLRKTMQYLKEQRVSIEDL 300
Query: 1128 RKPLQIKDEPDFGTRMSYPFFCIQFKEGISFKILFLVNAVMHKGIFNQYQLSKEFFNLLR 1307
+ L ++DEPDFG R+ P +CI FKEGI+FKILFLVNA++HKGIFN + LS +FFNLL+
Sbjct: 301 QTRLTVQDEPDFGMRLHDPLYCIHFKEGINFKILFLVNALLHKGIFNLHTLSDQFFNLLK 360
Query: 1308 SQPEEVNVAALKHICASKRPDFNAYERMRRVQGWLMKNPKLLERTRELDDIVEVRRLVIT 1487
SQ EEVN+AALKHIC++KRPDFNA +R++ Q L+KNPKLL RTRELDDIVEVRRL+IT
Sbjct: 361 SQKEEVNIAALKHICSAKRPDFNACKRLKNDQDRLLKNPKLL-RTRELDDIVEVRRLIIT 419
Query: 1488 PTKAYCLPPEVELSNRVLRNYRSVADRFLRVTFMDEGMQTLNKNVMTYYPAPIVRDITSN 1667
PT+AYCLPPEVELSNRVLR+Y+ +ADRFLRVTFMD+GMQTLNKNV+TYYPA IVR+ITS
Sbjct: 420 PTRAYCLPPEVELSNRVLRHYKLLADRFLRVTFMDDGMQTLNKNVVTYYPALIVREITST 479
Query: 1668 SNAQKTTVFRRVKNILSEGFVLCGRKYSFLAFSANQLRDRSAWFFAEEKNTCVPDILKWM 1847
N QKT+VFRR+K+I+SEGF LCGRKYSFLAFSANQLRDRSAWFFA ++NT V +I+K M
Sbjct: 480 LNPQKTSVFRRMKDIISEGFYLCGRKYSFLAFSANQLRDRSAWFFAGDQNTPVLEIMKSM 539
Query: 1848 GRFSEKNVAKCAARMGQCFSSTYATVEVPHSEVDSELPDIVRNGYVFSDGIGMISDDLAM 2027
G F+ +NVAKCAARMG CFSSTYATVEVPH+ VD EL DI RNGY FSDGIG IS DLA
Sbjct: 540 GHFTNRNVAKCAARMGLCFSSTYATVEVPHNNVDFELADIKRNGYDFSDGIGKISHDLAK 599
Query: 2028 EVAERLHLKVNPPCAYQIRYAGCKGVVACWPACKDGIRLSLRLSMNKFVSKHTILEICSW 2207
EVAERL L VNPPCAYQIRY GCKGVVACWPA K GIRLSLR SMNKF S HTILEICSW
Sbjct: 600 EVAERLQLNVNPPCAYQIRYGGCKGVVACWPASKSGIRLSLRQSMNKFESNHTILEICSW 659
Query: 2208 TRFQPGFLNRQIITLLSALNVCDDIFWEMQESMVYKLNQMLVNADTAFDVLTASCAEEGN 2387
TRFQPGFLNRQIITLLSALNV D++FW MQESM+ KLNQMLV+ D A+DV+T+SC EEGN
Sbjct: 660 TRFQPGFLNRQIITLLSALNVSDNVFWNMQESMISKLNQMLVSVDVAYDVVTSSCGEEGN 719
Query: 2388 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQFGDLREKARIFVPSGRWLMGCLDELGILEQG 2567
TAAIML AGFKP +EPHLRGMLTSIRAAQF DLREKARI+V SGRWLMGCLDE ILEQG
Sbjct: 720 TAAIMLGAGFKPHSEPHLRGMLTSIRAAQFRDLREKARIYVSSGRWLMGCLDEEAILEQG 779
Query: 2568 QCFIQLSNPSLENCFAKHGFKFSETKKDIEVIKGYVVVAKNPCLHPGDVRILEAVDVPSL 2747
QCF+Q+SNPSLENCFAKHG +FSETKKD+ VIKG+VVVAKNPCLHPGDVRILEAVDVPSL
Sbjct: 780 QCFVQVSNPSLENCFAKHGSEFSETKKDLHVIKGFVVVAKNPCLHPGDVRILEAVDVPSL 839
Query: 2748 HHLFDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWLPMDYAPPEVRKL 2927
HL DC+VFPQKGDRPHTNEASGSDLDGDLYFVTWD+NLIPP +KSW MDY+P EV+++
Sbjct: 840 RHLSDCVVFPQKGDRPHTNEASGSDLDGDLYFVTWDKNLIPPGEKSWPAMDYSPVEVKEM 899
Query: 2928 PRGVQHKDIIEFFTRNMVNENLGTICNAHVVHADSSEYGALDENCIKLAELAATAVDFPK 3107
R ++ +D+ +FF +NMVNE+LGTICNAHVVHADSS+YGA+DENCI LAELAA AVDFPK
Sbjct: 900 QRNIKLQDVADFFAKNMVNESLGTICNAHVVHADSSDYGAMDENCILLAELAAKAVDFPK 959
Query: 3108 TGKIVNMPSELKPKLYPDFMGKEEFQSYKSNKILGKLYRQITDNYYIDETASPEIKFVPK 3287
TGKI+NMP+ LKPKLYPDFM KE+FQSYKS KILG+LYR+I D+Y ID T S E+ F+P+
Sbjct: 960 TGKIINMPTHLKPKLYPDFMEKEDFQSYKSTKILGRLYRKIKDDYEIDSTDSMELNFLPR 1019
Query: 3288 EIPYDTDLEIPGSRTFVDEAWALKCSYDEQLNGLLGQYKVNREEEVVTGHIWSMPKNSSK 3467
EIPYD DLE PGS +F+DEAW +KCSYDEQLN LLGQYKVN+EEEVVTGHIWSM K+SSK
Sbjct: 1020 EIPYDMDLETPGSASFIDEAWGIKCSYDEQLNNLLGQYKVNKEEEVVTGHIWSMQKHSSK 1079
Query: 3468 KQGEMKERLKNAYNALKKEFRKVFEHMDPKFDELSDDEKNSTFESRASAWYQVTYHPEWV 3647
KQGE+KERLKNAYNALKKEFR+VFEHMD F+ S+DEKN+ +E +ASAWYQVTYHP+WV
Sbjct: 1080 KQGELKERLKNAYNALKKEFRRVFEHMDTDFENHSNDEKNAAYERKASAWYQVTYHPKWV 1139
Query: 3648 KKSLQLQDPDGG-TETVMLSFPWIAVDYLARIKIKHGGMKD--VQHAKPINSLVRYLADK 3818
K +L LQDPD ETVMLSFPWIA DYLARIKIK GGM D Q KPI+S+ RYL+ K
Sbjct: 1140 KMALDLQDPDANDKETVMLSFPWIASDYLARIKIKCGGMTDAITQPHKPIHSVARYLSGK 1199
Query: 3819 I 3821
I
Sbjct: 1200 I 1200
>XP_015885879.1 PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus jujuba]
XP_015885880.1 PREDICTED: RNA-dependent RNA polymerase 6
[Ziziphus jujuba] XP_015885881.1 PREDICTED: RNA-dependent
RNA polymerase 6 [Ziziphus jujuba] XP_015885882.1
PREDICTED: RNA-dependent RNA polymerase 6 [Ziziphus
jujuba] XP_015885883.1 PREDICTED: RNA-dependent RNA
polymerase 6 [Ziziphus jujuba]
Length = 1197
Score = 1809 bits (4685), Expect = 0.0
Identities = 871/1197 (72%), Positives = 1023/1197 (85%), Gaps = 1/1197 (0%)
Frame = +3
Query: 234 MGSEGSETDTIVTQISVGGFYNYITAKRLSEYFEDNIGGVWRCRLKTSSTPPESFPDFEI 413
MGS+ +E +VTQ+S+GGF ++ AK LS++ ED IG V+RCRLKTSSTPPES+PD+ I
Sbjct: 1 MGSKENEKQMVVTQVSLGGFDRHVRAKDLSDFLEDEIGLVYRCRLKTSSTPPESYPDYTI 60
Query: 414 NTENIQRTNTYEKVEPHAFVHFVLPDSARAAHNAAGHVELILEKNPLKVSLGPENPHRMN 593
+T I+R + Y+KVEPHAFVHF L +SA+ +AAG ELIL PLKVSLGPENP+R+N
Sbjct: 61 DTAAIERKDDYKKVEPHAFVHFALAESAKWILDAAGRCELILNDRPLKVSLGPENPYRLN 120
Query: 594 QRRRTKAPFKLSDVRVEIGTWVSKDKFFVAWRGLPTGVDFLVDPFDGTCKFLFTKDTAFS 773
QRRRT P KLSDV V+IGT V++D+FF+AWRG P GVDFLVDPFDGTCKF FT+DTAFS
Sbjct: 121 QRRRTTTPIKLSDVVVDIGTLVTRDQFFIAWRGPPYGVDFLVDPFDGTCKFCFTRDTAFS 180
Query: 774 FKSTGNHAVIKCNYKVEFLVRDIKEIKQYTDTSHLIILLQLESSPQVYYRTADDDVEESV 953
FK + NHAVIKC++K+EFLVRDI E KQYTDTS+L++LLQL S+P+++YRTADDD+++SV
Sbjct: 181 FKGSLNHAVIKCDFKMEFLVRDINEFKQYTDTSYLVLLLQLNSAPRIWYRTADDDIDDSV 240
Query: 954 PFDLLDDDDPWIRTTDFTLCGAIGRCSTYRILIPPRHGIKLKKAMKYLLERRVPSENLRK 1133
P+D+LDDDDPWIRTTDFT GAIGR ++YRI +PPRHG KLKKA+ YL ERRV ++LR
Sbjct: 241 PYDMLDDDDPWIRTTDFTPSGAIGRSNSYRISVPPRHGAKLKKAISYLRERRVHHDSLRW 300
Query: 1134 PLQIKDEPDFGTRMSYPFFCIQFKEGISFKILFLVNAVMHKGIFNQYQLSKEFFNLLRSQ 1313
PL+I+ EPDF MS PFFCI +KE I F+ +FLVNAV+HKGIFNQ+Q+S FFNLLR+Q
Sbjct: 301 PLRIQKEPDFDMPMSDPFFCIHYKEDIDFETMFLVNAVIHKGIFNQHQISDGFFNLLRNQ 360
Query: 1314 PEEVNVAALKHICASKRPDFNAYERMRRVQGWLMKNPKLLERTRELDDIVEVRRLVITPT 1493
+EVNVAALKHI + KRP F+A R++ VQ WL+++PKL ++ + LDDI EVRRLVITPT
Sbjct: 361 MKEVNVAALKHISSYKRPVFDACRRLKVVQEWLLRDPKLFKKPKRLDDIAEVRRLVITPT 420
Query: 1494 KAYCLPPEVELSNRVLRNYRSVADRFLRVTFMDEGMQTLNKNVMTYYPAPIVRDITSNSN 1673
+AYCLPPEVELSNRVLRNY+ VADRFLRVTFMDEGMQT+N NV+TY+ A IVR+ITSNS
Sbjct: 421 RAYCLPPEVELSNRVLRNYKEVADRFLRVTFMDEGMQTINSNVLTYHVASIVREITSNSF 480
Query: 1674 AQKTTVFRRVKNILSEGFVLCGRKYSFLAFSANQLRDRSAWFFAEEKNTCVPDILKWMGR 1853
QKT VF+R+K+IL+ GF LCGRKYSFLAFS+NQLRDRSAWFFAE+KN V ++ WMGR
Sbjct: 481 PQKTKVFQRIKSILTNGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKNINVFEVKSWMGR 540
Query: 1854 FSEKNVAKCAARMGQCFSSTYATVEVPHSEVDSELPDIVRNGYVFSDGIGMISDDLAMEV 2033
F+ +NVAKCAARMG CFSSTYA+VEVP ++V+ PDI RNGY FSDGIG I+ DLA+EV
Sbjct: 541 FTNRNVAKCAARMGLCFSSTYASVEVPSTQVNRGFPDIKRNGYTFSDGIGKITPDLALEV 600
Query: 2034 AERLHLKVNPPCAYQIRYAGCKGVVACW-PACKDGIRLSLRLSMNKFVSKHTILEICSWT 2210
A++L L+ NPPCAYQIRYAG KGVVACW P DG RLSLR SM+KF S HTILEICSWT
Sbjct: 601 AQKLKLERNPPCAYQIRYAGFKGVVACWKPTDDDGARLSLRPSMDKFQSNHTILEICSWT 660
Query: 2211 RFQPGFLNRQIITLLSALNVCDDIFWEMQESMVYKLNQMLVNADTAFDVLTASCAEEGNT 2390
RFQPGFLNRQI+TLLSALNV D+IFW MQE+M++KLNQML++ D AFDVLTASCAE+GN
Sbjct: 661 RFQPGFLNRQIVTLLSALNVSDEIFWNMQETMIFKLNQMLIDTDIAFDVLTASCAEQGNV 720
Query: 2391 AAIMLSAGFKPQTEPHLRGMLTSIRAAQFGDLREKARIFVPSGRWLMGCLDELGILEQGQ 2570
AAIMLSAGF PQ EPHLRGMLT IRAAQ LREKARIFVPSGRWLMGCLDELG+LEQGQ
Sbjct: 721 AAIMLSAGFSPQKEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGCLDELGVLEQGQ 780
Query: 2571 CFIQLSNPSLENCFAKHGFKFSETKKDIEVIKGYVVVAKNPCLHPGDVRILEAVDVPSLH 2750
CFIQ+SNPSLENCF+KHG +F+E ++EVIKG+VV+AKNPCLHPGDVRILEAVDVP LH
Sbjct: 781 CFIQVSNPSLENCFSKHGSRFNERNDNLEVIKGFVVIAKNPCLHPGDVRILEAVDVPDLH 840
Query: 2751 HLFDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWLPMDYAPPEVRKLP 2930
HL+DCLVFPQKG+RPHTNEASGSDLDGDLYFVTWDENLIPPSKKSW+PM Y E ++L
Sbjct: 841 HLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMQYDAAETKQLT 900
Query: 2931 RGVQHKDIIEFFTRNMVNENLGTICNAHVVHADSSEYGALDENCIKLAELAATAVDFPKT 3110
R V +DIIEFF++NMVNENLGTICNAHVVHAD SE+GALDE C+KLA+LAATAVDFPKT
Sbjct: 901 RPVTQEDIIEFFSKNMVNENLGTICNAHVVHADLSEHGALDEKCLKLADLAATAVDFPKT 960
Query: 3111 GKIVNMPSELKPKLYPDFMGKEEFQSYKSNKILGKLYRQITDNYYIDETASPEIKFVPKE 3290
GKIV MP LKPKLYPDFMGK+E+QSYKSNKILGKLYR+I D Y D TAS EI F+P +
Sbjct: 961 GKIVTMPFNLKPKLYPDFMGKDEYQSYKSNKILGKLYRKIKDAYDEDVTASSEINFLPSD 1020
Query: 3291 IPYDTDLEIPGSRTFVDEAWALKCSYDEQLNGLLGQYKVNREEEVVTGHIWSMPKNSSKK 3470
IPYD DLE+ G+ F+ +AW KCSYD QLNGLLGQYKVNREEEVVTGHIWSMPK SS+K
Sbjct: 1021 IPYDIDLEVSGASDFIVDAWEQKCSYDGQLNGLLGQYKVNREEEVVTGHIWSMPKYSSRK 1080
Query: 3471 QGEMKERLKNAYNALKKEFRKVFEHMDPKFDELSDDEKNSTFESRASAWYQVTYHPEWVK 3650
QGE+KERLK++Y+ALKKEFR++FE M+ KF+ELSDDEKN +E +ASAWYQVTYHPEWVK
Sbjct: 1081 QGELKERLKHSYSALKKEFRQIFEKMEEKFEELSDDEKNIIYEQKASAWYQVTYHPEWVK 1140
Query: 3651 KSLQLQDPDGGTETVMLSFPWIAVDYLARIKIKHGGMKDVQHAKPINSLVRYLADKI 3821
KSL LQ+PDG VMLSF WIA DYL RIKI+ G+ +V KPIN+L +YL+D++
Sbjct: 1141 KSLDLQEPDGSRYAVMLSFAWIAADYLTRIKIRCRGVGNVDCDKPINALGKYLSDRM 1197
>XP_002324295.1 SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] EEF02860.1
SILENCING DEFECTIVE 1 family protein [Populus
trichocarpa]
Length = 1200
Score = 1803 bits (4671), Expect = 0.0
Identities = 867/1200 (72%), Positives = 1006/1200 (83%), Gaps = 4/1200 (0%)
Frame = +3
Query: 234 MGSEGSETDTIVTQISVGGFYNYITAKRLSEYFEDNIGGVWRCRLKTSSTPPESFPDFEI 413
M +EGS +T+VTQ+SVGGF ++TAK L EY + IG VWRCRLKTS TPPES+P+FEI
Sbjct: 1 MEAEGSAKETVVTQVSVGGFDIHVTAKDLLEYLDRAIGLVWRCRLKTSWTPPESYPNFEI 60
Query: 414 -NTENIQRTNTYEKVEPHAFVHFVLPDSARAAHNAAGHVELILEKNPLKVSLGPENPHRM 590
+ I+RT Y +V PHAFVHF LP SA A NA+G EL L LKVSLGP+NP +
Sbjct: 61 TDITKIERTEDYRRVVPHAFVHFALPQSATLAMNASGRCELFLNNKALKVSLGPKNPFTL 120
Query: 591 NQRRRTKAPFKLSDVRVEIGTWVSKDKFFVAWRGLPTGVDFLVDPFDGTCKFLFTKDTAF 770
NQRRRT PFKLSDV EIG VS+D+FFV WRG P+GVDFLVDPFDGTCKF F+++TAF
Sbjct: 121 NQRRRTTTPFKLSDVGFEIGNLVSRDEFFVGWRGPPSGVDFLVDPFDGTCKFCFSRNTAF 180
Query: 771 SFKSTGNHAVIKCNYKVEFLVRDIKEIKQYTDTSHLIILLQLESSPQVYYRTADDDVEES 950
S KST HAVIKC++KVEFLVRDI EI QYT+TS L++LLQL S+P V+YRTADDD+E
Sbjct: 181 SLKSTSEHAVIKCDFKVEFLVRDINEIIQYTETSCLVLLLQLASAPWVWYRTADDDIEAW 240
Query: 951 VPFDLLDDDDPWIRTTDFTLCGAIGRCSTYRILIPPRHGIKLKKAMKYLLERRVP---SE 1121
VPFDLLDDDDPWIRTTDFT GAIGRC +YR+ IPPRHG KL+KA+KYL ERRV E
Sbjct: 241 VPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGSKLRKAVKYLKERRVQVLQEE 300
Query: 1122 NLRKPLQIKDEPDFGTRMSYPFFCIQFKEGISFKILFLVNAVMHKGIFNQYQLSKEFFNL 1301
N R+ ++I DEPDFG MS PFFCI KEGI+F++LFLVNAVMHKGIFNQ+QLS +FF+L
Sbjct: 301 NHRRRIRILDEPDFGMPMSDPFFCIHHKEGIAFEVLFLVNAVMHKGIFNQHQLSNDFFDL 360
Query: 1302 LRSQPEEVNVAALKHICASKRPDFNAYERMRRVQGWLMKNPKLLERTRELDDIVEVRRLV 1481
LR+Q EVNV+ALKHIC +RP FNAY R++ VQ WL+KNP L + ++L D+VE+RRLV
Sbjct: 361 LRNQHTEVNVSALKHICTYRRPVFNAYRRLKAVQEWLLKNPNLFKNPKQLGDVVEIRRLV 420
Query: 1482 ITPTKAYCLPPEVELSNRVLRNYRSVADRFLRVTFMDEGMQTLNKNVMTYYPAPIVRDIT 1661
ITPTKAYCLPPEVELSNRVLR Y+ VADRFLRVTFMDEG+Q +N NV+ YY APIVRDIT
Sbjct: 421 ITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVLNYYVAPIVRDIT 480
Query: 1662 SNSNAQKTTVFRRVKNILSEGFVLCGRKYSFLAFSANQLRDRSAWFFAEEKNTCVPDILK 1841
SNS QKT +F+RV++IL+EGF LCGR+YSFLAFSANQLRD+SAWFF+EE+N V D+
Sbjct: 481 SNSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFSEERNISVLDVKS 540
Query: 1842 WMGRFSEKNVAKCAARMGQCFSSTYATVEVPHSEVDSELPDIVRNGYVFSDGIGMISDDL 2021
WMG+F+ +N+AKCAARMGQCFSSTYAT+EVP EV+S+LPDI RNGYVFSDGIG+I+ DL
Sbjct: 541 WMGKFTNRNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIERNGYVFSDGIGIITPDL 600
Query: 2022 AMEVAERLHLKVNPPCAYQIRYAGCKGVVACWPACKDGIRLSLRLSMNKFVSKHTILEIC 2201
A EVAE+L L ++PPCAYQIRYAGCKGVVACWP DG+RLSLR SMNKF S HT LEIC
Sbjct: 601 AREVAEKLKLDIDPPCAYQIRYAGCKGVVACWPGKGDGVRLSLRPSMNKFQSNHTTLEIC 660
Query: 2202 SWTRFQPGFLNRQIITLLSALNVCDDIFWEMQESMVYKLNQMLVNADTAFDVLTASCAEE 2381
SWTRFQPGFLNRQIITLLS LNV D +FW+MQE+MV KLNQM VN+D AFDVLTASCA++
Sbjct: 661 SWTRFQPGFLNRQIITLLSTLNVPDAVFWKMQETMVSKLNQMFVNSDVAFDVLTASCADQ 720
Query: 2382 GNTAAIMLSAGFKPQTEPHLRGMLTSIRAAQFGDLREKARIFVPSGRWLMGCLDELGILE 2561
GN AAIMLSAGFKP EPHLRGMLT +RAAQ DLREK RIFVPSGRWLMGCLDELG+LE
Sbjct: 721 GNVAAIMLSAGFKPDREPHLRGMLTCVRAAQLWDLREKTRIFVPSGRWLMGCLDELGMLE 780
Query: 2562 QGQCFIQLSNPSLENCFAKHGFKFSETKKDIEVIKGYVVVAKNPCLHPGDVRILEAVDVP 2741
QGQCFIQ+SN SLE CF KHG KFSE +K+++VIKG VV+AKNPCLHPGDVR+LEAVDVP
Sbjct: 781 QGQCFIQVSNSSLEKCFMKHGAKFSEAEKNLQVIKGTVVIAKNPCLHPGDVRVLEAVDVP 840
Query: 2742 SLHHLFDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWLPMDYAPPEVR 2921
LHHL+DCLVFPQKG+RPHTNEASGSDLDGDLYFVTWDENLIPPSK+SW+PM Y E +
Sbjct: 841 GLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAK 900
Query: 2922 KLPRGVQHKDIIEFFTRNMVNENLGTICNAHVVHADSSEYGALDENCIKLAELAATAVDF 3101
L R V H+DIIEFF +NMVN+NLG ICNAHVVHAD SEYGA D+NC+ LAELAATAVDF
Sbjct: 901 LLARPVNHQDIIEFFAKNMVNDNLGAICNAHVVHADLSEYGATDKNCLTLAELAATAVDF 960
Query: 3102 PKTGKIVNMPSELKPKLYPDFMGKEEFQSYKSNKILGKLYRQITDNYYIDETASPEIKFV 3281
PKTGK+V+MP LKPK+YPDFMGKEE+QSYKS KILG+LYRQI D Y D AS E+ V
Sbjct: 961 PKTGKVVSMPPYLKPKMYPDFMGKEEYQSYKSEKILGRLYRQIKDAYDEDVAASSELNLV 1020
Query: 3282 PKEIPYDTDLEIPGSRTFVDEAWALKCSYDEQLNGLLGQYKVNREEEVVTGHIWSMPKNS 3461
P +IPYD+DLE+ G+ ++ +AW KCSYD QLNGLL QYKV REEEVVTGHIWSMPK S
Sbjct: 1021 PGDIPYDSDLEVVGASDYISDAWDQKCSYDGQLNGLLSQYKVKREEEVVTGHIWSMPKYS 1080
Query: 3462 SKKQGEMKERLKNAYNALKKEFRKVFEHMDPKFDELSDDEKNSTFESRASAWYQVTYHPE 3641
S+KQGE+K+RLK++YN+LKKEFR++FE MD +F++L D EKN +E +ASAWYQV YHP
Sbjct: 1081 SRKQGELKDRLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVVYHPH 1140
Query: 3642 WVKKSLQLQDPDGGTETVMLSFPWIAVDYLARIKIKHGGMKDVQHAKPINSLVRYLADKI 3821
WVKKSL+LQDPDG +VMLSF WIA DYLARIKI+H +V AKP+NSL +YLAD++
Sbjct: 1141 WVKKSLELQDPDGAGTSVMLSFAWIAADYLARIKIRHRETGNVDSAKPVNSLAKYLADRM 1200
>ACO72600.1 RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
Length = 1197
Score = 1797 bits (4655), Expect = 0.0
Identities = 882/1198 (73%), Positives = 1002/1198 (83%), Gaps = 2/1198 (0%)
Frame = +3
Query: 234 MGSEGSETDTIVTQISVGGFYNYITAKRLSEYFEDNIGGVWRCRLKTSSTPPESFPDFEI 413
MGSEGSE + +VTQISVGGF N + AK LSEY E+ +G VWRCRLK SSTPP+S+P ++I
Sbjct: 1 MGSEGSEKELVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTYDI 60
Query: 414 NTENIQRTNTYEKVEPHAFVHFVLPDSARAAHNAAGHVELILEKNPLKVSLGPENPHRMN 593
+ E +QR N YEKV PHAFVHF +SA+ A AAG EL+L K PL VSLGPENP+R+N
Sbjct: 61 DAERVQRMNNYEKVVPHAFVHFASSESAKHALAAAGGNELVLGKKPLIVSLGPENPYRLN 120
Query: 594 QRRRTKAPFKLSDVRVEIGTWVSKDKFFVAWRGLPTGVDFLVDPFDGTCKFLFTKDTAFS 773
QRRRT PFK SDV VE+G VSK F V WRG TGVDFLVDPF+GTCK LFTKDT FS
Sbjct: 121 QRRRTTMPFKFSDVSVEMGVLVSKHDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTVFS 180
Query: 774 FKSTGNHAVIKCNYKVEFLVRDIKEIKQYTDTSHLIILLQLESSPQVYYRTADDDVEESV 953
F+ HA+IKCN+K+EFLVR+I EIK+ D L+ILLQL SSP V+YRTADDD+EESV
Sbjct: 181 FRGEARHAIIKCNFKIEFLVREINEIKKCKDFMSLVILLQLASSPLVFYRTADDDIEESV 240
Query: 954 PFDLLDDDDPWIRTTDFTLCGAIGRCSTYRILIPPRHGIKLKKAMKYLLERRVPSENL-- 1127
FDLLDDDD WIRTTD T GAIGRC+TYRI I PR+G +KAM Y RVP +
Sbjct: 241 AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCN 300
Query: 1128 RKPLQIKDEPDFGTRMSYPFFCIQFKEGISFKILFLVNAVMHKGIFNQYQLSKEFFNLLR 1307
RK L+++DEPDFG MS PFFC Q EGISFK+LFL NAV+HKGI NQ+Q+ EFF LLR
Sbjct: 301 RKMLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVLFLANAVLHKGIVNQHQMINEFFYLLR 359
Query: 1308 SQPEEVNVAALKHICASKRPDFNAYERMRRVQGWLMKNPKLLERTRELDDIVEVRRLVIT 1487
S EEVN+AALKH+ + K P +A +++ +Q WL+KNPKLLERT ELDDIVEVRRLVIT
Sbjct: 360 SHQEEVNLAALKHMFSYKWPVNDAIQKLAGIQKWLLKNPKLLERTGELDDIVEVRRLVIT 419
Query: 1488 PTKAYCLPPEVELSNRVLRNYRSVADRFLRVTFMDEGMQTLNKNVMTYYPAPIVRDITSN 1667
PTKAYCLPP VELSNRVLRNY+ VADRFLRVTFMDEGM+ LN+NV+TYY A IVR+ITSN
Sbjct: 420 PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479
Query: 1668 SNAQKTTVFRRVKNILSEGFVLCGRKYSFLAFSANQLRDRSAWFFAEEKNTCVPDILKWM 1847
SN Q+T +F+RVK+ILS+GF LCGRKYSFLAFSANQLRDRSAWFFAE+ VP I+ WM
Sbjct: 480 SNPQRTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539
Query: 1848 GRFSEKNVAKCAARMGQCFSSTYATVEVPHSEVDSELPDIVRNGYVFSDGIGMISDDLAM 2027
GRFS +NVAKCAARMGQCFSSTYATVEVP SEV+SELPDI RNGYVFSDGIGMIS DLA+
Sbjct: 540 GRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAI 599
Query: 2028 EVAERLHLKVNPPCAYQIRYAGCKGVVACWPACKDGIRLSLRLSMNKFVSKHTILEICSW 2207
EVAE+LHL VNPP AYQIRYAGCKGVVACWP DGIRLSLR SM KF S HTILEICSW
Sbjct: 600 EVAEKLHLSVNPPAAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSW 659
Query: 2208 TRFQPGFLNRQIITLLSALNVCDDIFWEMQESMVYKLNQMLVNADTAFDVLTASCAEEGN 2387
TRFQPGFLNRQI+TLLS+L+V D IFWEMQ+ M+ L++MLV++D AFDV+TASCAE GN
Sbjct: 660 TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMIAGLDKMLVDSDVAFDVITASCAEAGN 719
Query: 2388 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQFGDLREKARIFVPSGRWLMGCLDELGILEQG 2567
TAA+MLSAGFKPQ+EPHLRGML+SIRA+Q GDLR KARIFVPSGRWLMGCLDELG LEQG
Sbjct: 720 TAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779
Query: 2568 QCFIQLSNPSLENCFAKHGFKFSETKKDIEVIKGYVVVAKNPCLHPGDVRILEAVDVPSL 2747
QCFIQ+S+PSLENCF KHG KFS+ KK+++V+KG VV+AKNPCLHPGDVRILEAVDVPSL
Sbjct: 780 QCFIQVSSPSLENCFVKHGSKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSL 839
Query: 2748 HHLFDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWLPMDYAPPEVRKL 2927
HL+DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDEN+IPPSKKSW+PM+Y P EV++L
Sbjct: 840 SHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENIIPPSKKSWIPMNYEPAEVKQL 899
Query: 2928 PRGVQHKDIIEFFTRNMVNENLGTICNAHVVHADSSEYGALDENCIKLAELAATAVDFPK 3107
R V H DII+FF++NMV E+LG ICNAHVVHAD SE+GALDE C+KLAELAA AVDFPK
Sbjct: 900 GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959
Query: 3108 TGKIVNMPSELKPKLYPDFMGKEEFQSYKSNKILGKLYRQITDNYYIDETASPEIKFVPK 3287
TGK+V MP +LKPK+YPDFMGKEEFQSYKS KILGKLYRQ+ D + S ++ VPK
Sbjct: 960 TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPK 1019
Query: 3288 EIPYDTDLEIPGSRTFVDEAWALKCSYDEQLNGLLGQYKVNREEEVVTGHIWSMPKNSSK 3467
+IPYDT LEI GS TF+D+AW KCSYD QLNGLLGQYKVNREEEVVTGHIWSMPK S+K
Sbjct: 1020 DIPYDTTLEILGSTTFIDDAWNSKCSYDGQLNGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079
Query: 3468 KQGEMKERLKNAYNALKKEFRKVFEHMDPKFDELSDDEKNSTFESRASAWYQVTYHPEWV 3647
KQGE+KERLK+AYN L+KEFR VFE M+P FD L DDEKN +E +ASAWYQVTYHP WV
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYHPHWV 1139
Query: 3648 KKSLQLQDPDGGTETVMLSFPWIAVDYLARIKIKHGGMKDVQHAKPINSLVRYLADKI 3821
+SL+LQ PD + TVMLSF WIA DYLARIKI+H G+ KPINSL RYLADKI
Sbjct: 1140 ARSLELQIPDAVSSTVMLSFAWIAADYLARIKIRHRGLPYSDSTKPINSLGRYLADKI 1197
>XP_002308662.1 SILENCING DEFECTIVE 1 family protein [Populus trichocarpa] EEE92185.1
SILENCING DEFECTIVE 1 family protein [Populus
trichocarpa]
Length = 1198
Score = 1796 bits (4653), Expect = 0.0
Identities = 868/1198 (72%), Positives = 1003/1198 (83%), Gaps = 2/1198 (0%)
Frame = +3
Query: 234 MGSEGSETDTIVTQISVGGFYNYITAKRLSEYFEDNIGGVWRCRLKTSSTPPESFPDFEI 413
M +EGS +T+VTQ+S+GGF ++TAK L EY E IG VWRCRLKTS TPPES+P+FEI
Sbjct: 1 METEGSAKETVVTQVSLGGFDIHVTAKDLLEYLEREIGLVWRCRLKTSWTPPESYPNFEI 60
Query: 414 -NTENIQRTNTYEKVEPHAFVHFVLPDSARAAHNAAGHVELILEKNPLKVSLGPENPHRM 590
+ I RT Y +VEPHAFVHF LP SA A +AA EL L LK SLGPENP +
Sbjct: 61 TDITKITRTEDYRRVEPHAFVHFALPQSATCAIDAADRCELFLNNKGLKASLGPENPFTL 120
Query: 591 NQRRRTKAPFKLSDVRVEIGTWVSKDKFFVAWRGLPTGVDFLVDPFDGTCKFLFTKDTAF 770
NQRRR PFKLS V VEIGT VS+D+FFV WRG PTGVDFLVDPFDGTC+F F+++TAF
Sbjct: 121 NQRRRKTTPFKLSGVGVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRNTAF 180
Query: 771 SFKSTGNHAVIKCNYKVEFLVRDIKEIKQYTDTSHLIILLQLESSPQVYYRTADDDVEES 950
SFKST HAVIKC++KVEFLVRDI EIKQYT+TS L++LLQL S+P+V+YRTADDD+E S
Sbjct: 181 SFKSTAEHAVIKCDFKVEFLVRDINEIKQYTETSCLVLLLQLASAPRVWYRTADDDIEVS 240
Query: 951 VPFDLLDDDDPWIRTTDFTLCGAIGRCSTYRILIPPRHGIKLKKAMKYLLERRVPSENLR 1130
VPFDLLDDDDPWIRTTDFT GAIGRC +YR+ IPPRHG KL+KA+ +L ERRV E LR
Sbjct: 241 VPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEEYLR 300
Query: 1131 KPLQIKDEPDFGTRMSYPFFCIQFKEGISFKILFLVNAVMHKGIFNQYQLSKEFFNLLRS 1310
+P++I+DEPDFG M+ PFFCI KEGI+F +LFLVNAVMHKGIFNQ+QLS +FF+LLR+
Sbjct: 301 RPIRIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLRN 360
Query: 1311 QPEEVNVAALKHICASKRPDFNAYERMRRVQGWLMKNPKLLERTRELDDIVEVRRLVITP 1490
QP EVNVAALKHI +RP F+AY++++ Q WL+KNPK + ++LDDI E+RRLVITP
Sbjct: 361 QPTEVNVAALKHIYPYRRPVFDAYKKLKVAQEWLLKNPKFFKNQKKLDDIAEIRRLVITP 420
Query: 1491 TKAYCLPPEVELSNRVLRNYRSVADRFLRVTFMDEGMQTLNKNVMTYYPAPIVRDITSNS 1670
TKAYCLPPEVELSNRVLR Y+ VADRFLRVTFMDEG+QT+N N + Y+ APIVR ITS S
Sbjct: 421 TKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNSNALNYFAAPIVRAITSYS 480
Query: 1671 NAQKTTVFRRVKNILSEGFVLCGRKYSFLAFSANQLRDRSAWFFAEEKNTCVPDILKWMG 1850
QKT +F+RV++IL+EGF LCGR+YSFLAFS+NQLRDRSAWFFAE++N V I WMG
Sbjct: 481 FPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVMAIKSWMG 540
Query: 1851 RFSEKNVAKCAARMGQCFSSTYATVEVPHSEVDSELPDIVRNGYVFSDGIGMISDDLAME 2030
+F+ KN+AKCAARMGQCFSSTYAT+EVP EV+S+LPDI RNGY FSDGIGMI+ DLA E
Sbjct: 541 KFTNKNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITPDLARE 600
Query: 2031 VAERLHLKVNPPCAYQIRYAGCKGVVACWPACKDGIRLSLRLSMNKFVSKHTILEICSWT 2210
VAE+L +PPCAYQIRYAGCKGVVACWP DGIRLSLR SMNKF S HTILEICSWT
Sbjct: 601 VAEKLKFDFDPPCAYQIRYAGCKGVVACWPEQGDGIRLSLRSSMNKFQSNHTILEICSWT 660
Query: 2211 RFQPGFLNRQIITLLSALNVCDDIFWEMQESMVYKLNQMLVNADTAFDVLTASCAEEGNT 2390
RFQPGFLNRQIITLLSALNV D +FW+MQE MV KLNQMLV++D AFDVLTASCAE+GN
Sbjct: 661 RFQPGFLNRQIITLLSALNVPDAVFWKMQELMVSKLNQMLVDSDVAFDVLTASCAEQGNV 720
Query: 2391 AAIMLSAGFKPQTEPHLRGMLTSIRAAQFGDLREKARIFVPSGRWLMGCLDELGILEQGQ 2570
AAIMLSAGFKPQ EPHLRGMLT +RAAQ LREKARIFVPSGRWLMGCLDELG+LEQGQ
Sbjct: 721 AAIMLSAGFKPQKEPHLRGMLTCVRAAQLWGLREKARIFVPSGRWLMGCLDELGVLEQGQ 780
Query: 2571 CFIQLSNPSLENCFAKHGFKFSETKKDIEVIKGYVVVAKNPCLHPGDVRILEAVDVPSLH 2750
CFIQ+SN LENCF KHG KFSETKK+++V+KG VV+AKNPCLHPGD+RILEAVD P LH
Sbjct: 781 CFIQVSNSYLENCFVKHGSKFSETKKNLQVVKGTVVIAKNPCLHPGDIRILEAVDAPGLH 840
Query: 2751 HLFDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWLPMDYAPPEVRKLP 2930
HL+DCLVFPQKG+RPH NEASGSDLDGDLYFVTWDENLIPPSK+SW+PM Y E ++L
Sbjct: 841 HLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKQLT 900
Query: 2931 RGVQHKDIIEFFTRNMVNENLGTICNAHVVHADSSEYGALDENCIKLAELAATAVDFPKT 3110
R V H+DI+EFF +NM NENLG ICNAHVV AD SEYGALDE C+ LAELAATAVDFPKT
Sbjct: 901 RPVNHQDIVEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAVDFPKT 960
Query: 3111 GKIVNMPSELKPKLYPDFMGKEEFQSYKSNKILGKLYRQITDNYYIDE-TASPEIKFVPK 3287
GKIV+MPS+LKPK+YPDFMGKEE QSYKS KILG+LYRQI D Y D+ AS E+ FV
Sbjct: 961 GKIVSMPSDLKPKIYPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAASSELNFVRG 1020
Query: 3288 EIPYDTDLEIPGSRTFVDEAWALKCSYDEQLNGLLGQYKVNREEEVVTGHIWSMPKNSSK 3467
+IPYD DLE+ G+ F+ +AW KCSYD QLNGLL QYKV REEEVVTGH+WSMPK SS+
Sbjct: 1021 DIPYDLDLEVLGATDFISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVWSMPKGSSR 1080
Query: 3468 KQGEMKERLKNAYNALKKEFRKVFEHMDPKFDELSDDEKNSTFESRASAWYQVTYHPEWV 3647
KQG++KERLK++YN LK+EFR+VFE MD F +L DDEKN +E +ASAWYQVTYHP W+
Sbjct: 1081 KQGDLKERLKHSYNCLKREFRQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVTYHPHWI 1140
Query: 3648 KKSLQLQDPDGGTETVMLSFPWIAVDYLARIKIKHGGMKDVQHAKPINSLVRYLADKI 3821
+KSL+LQD DG +VMLSF WIA DYLARIKI+H + +V AKP+NSL +YLAD++
Sbjct: 1141 QKSLELQDSDGAGISVMLSFAWIAADYLARIKIRHSRIGNVDSAKPVNSLAKYLADRM 1198
>XP_011026450.1 PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
Length = 1200
Score = 1794 bits (4647), Expect = 0.0
Identities = 868/1200 (72%), Positives = 1005/1200 (83%), Gaps = 4/1200 (0%)
Frame = +3
Query: 234 MGSEGSETDTIVTQISVGGFYNYITAKRLSEYFEDNIGGVWRCRLKTSSTPPESFPDFEI 413
M +EGS +T+VTQ+SVGGF ++TAK LSEY + IG VWRCRLKTS TPPES+P+FEI
Sbjct: 1 MEAEGSAKETVVTQVSVGGFGIHVTAKDLSEYLDRAIGLVWRCRLKTSWTPPESYPNFEI 60
Query: 414 -NTENIQRTNTYEKVEPHAFVHFVLPDSARAAHNAAGHVELILEKNPLKVSLGPENPHRM 590
+ I+RT Y +V PHAFVHF LP SA A NA+ EL L LKVSLGP+NP +
Sbjct: 61 TDITKIERTEDYRRVVPHAFVHFALPQSATWAMNASERCELFLNDKALKVSLGPKNPFTL 120
Query: 591 NQRRRTKAPFKLSDVRVEIGTWVSKDKFFVAWRGLPTGVDFLVDPFDGTCKFLFTKDTAF 770
NQ+RRT PFKLSDV EIG+ VS D+FFV WRG P+GVDFLVDPFDGTC+F F+++TAF
Sbjct: 121 NQQRRTTTPFKLSDVGFEIGSLVSHDEFFVGWRGPPSGVDFLVDPFDGTCRFCFSRNTAF 180
Query: 771 SFKSTGNHAVIKCNYKVEFLVRDIKEIKQYTDTSHLIILLQLESSPQVYYRTADDDVEES 950
S KST HAVIKC +KVEFLVRDI EI QYT+TS L++LLQL S+P V+YRTADDD+E
Sbjct: 181 SLKSTSEHAVIKCAFKVEFLVRDINEIIQYTETSCLVLLLQLASAPWVWYRTADDDIEAW 240
Query: 951 VPFDLLDDDDPWIRTTDFTLCGAIGRCSTYRILIPPRHGIKLKKAMKYLLERRVP---SE 1121
VPFDLLDDDDPWIRTTDFT GAIGRC +YR+ IPPRHG KL+KA+KYL ERRV E
Sbjct: 241 VPFDLLDDDDPWIRTTDFTGSGAIGRCHSYRVSIPPRHGSKLRKAVKYLKERRVEVLQEE 300
Query: 1122 NLRKPLQIKDEPDFGTRMSYPFFCIQFKEGISFKILFLVNAVMHKGIFNQYQLSKEFFNL 1301
N R+ ++I DEPDFG MS PFFCI KEGI+F +LFLVNAVMHKGIFNQ+QLS +FF+L
Sbjct: 301 NHRRRIRILDEPDFGMPMSDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDL 360
Query: 1302 LRSQPEEVNVAALKHICASKRPDFNAYERMRRVQGWLMKNPKLLERTRELDDIVEVRRLV 1481
LR+Q EVNV+ALKHIC +RP FNAY+R++ VQ WL+KNP L + ++L DIVE+RRLV
Sbjct: 361 LRNQHTEVNVSALKHICTYRRPVFNAYKRLKAVQEWLLKNPNLFKNPKQLGDIVEIRRLV 420
Query: 1482 ITPTKAYCLPPEVELSNRVLRNYRSVADRFLRVTFMDEGMQTLNKNVMTYYPAPIVRDIT 1661
ITPTKAYCLPPEVELSNRVLR Y+ VADRFLRVTFMDEG+Q +N NV+ YY APIVRDIT
Sbjct: 421 ITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVLNYYVAPIVRDIT 480
Query: 1662 SNSNAQKTTVFRRVKNILSEGFVLCGRKYSFLAFSANQLRDRSAWFFAEEKNTCVPDILK 1841
SNS QKT +F+RV++IL+EGF LCGR+YSFLAFSANQLRD+SAWFFAEE+N V DI
Sbjct: 481 SNSFHQKTRIFKRVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFAEERNVSVLDIKS 540
Query: 1842 WMGRFSEKNVAKCAARMGQCFSSTYATVEVPHSEVDSELPDIVRNGYVFSDGIGMISDDL 2021
WMG+F+ +N+AKCAARMGQCFSSTYAT+EVP EV+ +LPDI RNGYVFSDGIG+I+ DL
Sbjct: 541 WMGKFTNRNIAKCAARMGQCFSSTYATIEVPPEEVNFDLPDIERNGYVFSDGIGIITPDL 600
Query: 2022 AMEVAERLHLKVNPPCAYQIRYAGCKGVVACWPACKDGIRLSLRLSMNKFVSKHTILEIC 2201
A EVAE+L L ++PPCAYQIRYAGCKGVVACWP DG+ LSLR SMNKF S HT LEIC
Sbjct: 601 AREVAEKLKLDIDPPCAYQIRYAGCKGVVACWPGKGDGVHLSLRPSMNKFQSNHTTLEIC 660
Query: 2202 SWTRFQPGFLNRQIITLLSALNVCDDIFWEMQESMVYKLNQMLVNADTAFDVLTASCAEE 2381
SWTRFQPGFLNRQIITLLS LNV D +FW+MQE+MV KLNQM VN+D AFDVLTASCA++
Sbjct: 661 SWTRFQPGFLNRQIITLLSTLNVPDAVFWKMQETMVSKLNQMFVNSDVAFDVLTASCADQ 720
Query: 2382 GNTAAIMLSAGFKPQTEPHLRGMLTSIRAAQFGDLREKARIFVPSGRWLMGCLDELGILE 2561
GN AAIMLSAGFKPQ EPHLRGMLT +RAAQ LREKARIFVPSGRWLMGCLDELG+LE
Sbjct: 721 GNVAAIMLSAGFKPQKEPHLRGMLTCVRAAQLWGLREKARIFVPSGRWLMGCLDELGMLE 780
Query: 2562 QGQCFIQLSNPSLENCFAKHGFKFSETKKDIEVIKGYVVVAKNPCLHPGDVRILEAVDVP 2741
QGQCFIQ+SN SLE CF KHG KFSE KK+++V+KG VV+AKNPCLHPGDVR+LEAVDVP
Sbjct: 781 QGQCFIQVSNSSLEKCFIKHGAKFSEAKKNLQVVKGTVVIAKNPCLHPGDVRVLEAVDVP 840
Query: 2742 SLHHLFDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWLPMDYAPPEVR 2921
LHHL+DCLVFPQKG+RPHTNEASGSDLDGDLYFVTWDENLIPPSK+SW+PM Y E +
Sbjct: 841 GLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAK 900
Query: 2922 KLPRGVQHKDIIEFFTRNMVNENLGTICNAHVVHADSSEYGALDENCIKLAELAATAVDF 3101
L R V H+DIIEFF +NMVNENLG ICNAHVVHAD SE+GA+DE C+ LAELAATAVDF
Sbjct: 901 LLARPVNHQDIIEFFAKNMVNENLGAICNAHVVHADLSEHGAMDEKCLTLAELAATAVDF 960
Query: 3102 PKTGKIVNMPSELKPKLYPDFMGKEEFQSYKSNKILGKLYRQITDNYYIDETASPEIKFV 3281
PKTGK+V MPS LKPK+YPDFMGKEE+QSYKS KILG+LYRQI D Y D AS E+ V
Sbjct: 961 PKTGKVVTMPSYLKPKVYPDFMGKEEYQSYKSEKILGRLYRQIKDAYDEDVAASSELNPV 1020
Query: 3282 PKEIPYDTDLEIPGSRTFVDEAWALKCSYDEQLNGLLGQYKVNREEEVVTGHIWSMPKNS 3461
P +IPYD+DLE+ G+ ++++AW KCSYD QLNGLL QYKV REEE+VTGHIWSMPK S
Sbjct: 1021 PGDIPYDSDLEVVGASDYINDAWDQKCSYDGQLNGLLSQYKVKREEELVTGHIWSMPKYS 1080
Query: 3462 SKKQGEMKERLKNAYNALKKEFRKVFEHMDPKFDELSDDEKNSTFESRASAWYQVTYHPE 3641
S+KQGE+K+RLK++YN+LKKEFR++FE MD +F++L D EKN +E +ASAWYQV YHP
Sbjct: 1081 SRKQGELKDRLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVAYHPH 1140
Query: 3642 WVKKSLQLQDPDGGTETVMLSFPWIAVDYLARIKIKHGGMKDVQHAKPINSLVRYLADKI 3821
WVKKSL+LQDPDG +VMLSF WIA DYLARIKI+H +V AKP+NSL +YLAD+I
Sbjct: 1141 WVKKSLELQDPDGAGTSVMLSFGWIAADYLARIKIRHRETGNVDSAKPVNSLAKYLADRI 1200
>XP_019260524.1 PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana attenuata]
OIT39130.1 rna-dependent rna polymerase 6 [Nicotiana
attenuata]
Length = 1197
Score = 1794 bits (4646), Expect = 0.0
Identities = 878/1198 (73%), Positives = 1003/1198 (83%), Gaps = 2/1198 (0%)
Frame = +3
Query: 234 MGSEGSETDTIVTQISVGGFYNYITAKRLSEYFEDNIGGVWRCRLKTSSTPPESFPDFEI 413
MGSEGSE D +VTQISVGGF N + AK LSEY E+ +G VWRCRLK SSTPP+S+P F++
Sbjct: 1 MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTFDV 60
Query: 414 NTENIQRTNTYEKVEPHAFVHFVLPDSARAAHNAAGHVELILEKNPLKVSLGPENPHRMN 593
+ E +QR YEKV PHAFVHF +SA+ A AAG ELIL K PL VSLGPENP+R+N
Sbjct: 61 DAERVQRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120
Query: 594 QRRRTKAPFKLSDVRVEIGTWVSKDKFFVAWRGLPTGVDFLVDPFDGTCKFLFTKDTAFS 773
QRRRT PFK SDV +E+G VSKD F V WRG TGVDFLVDPF+G CK LFTKDTAFS
Sbjct: 121 QRRRTTMPFKFSDVSIEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGACKILFTKDTAFS 180
Query: 774 FKSTGNHAVIKCNYKVEFLVRDIKEIKQYTDTSHLIILLQLESSPQVYYRTADDDVEESV 953
F+ HA+IKCN+K+EFLVR+I EIK+ D + L+ILLQL SSP V+YRTADDD+EESV
Sbjct: 181 FRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEESV 240
Query: 954 PFDLLDDDDPWIRTTDFTLCGAIGRCSTYRILIPPRHGIKLKKAMKYLLERRVPSENL-- 1127
FDLLDDDD WIRTTD T GAIGRC+TYRI I PR+G +KAM Y RVP +
Sbjct: 241 AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCN 300
Query: 1128 RKPLQIKDEPDFGTRMSYPFFCIQFKEGISFKILFLVNAVMHKGIFNQYQLSKEFFNLLR 1307
RK L+++DEPDFG MS PFFC Q EGISFK++FLVNAV+HKGI NQ+Q++ EFF LLR
Sbjct: 301 RKMLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359
Query: 1308 SQPEEVNVAALKHICASKRPDFNAYERMRRVQGWLMKNPKLLERTRELDDIVEVRRLVIT 1487
S EEVN+AALKH+ + K P +A +++ ++ WL+KNPKLLERT ELDDIVEVRRLVIT
Sbjct: 360 SHQEEVNLAALKHMFSYKWPVNDAIQKLVGIRKWLLKNPKLLERTGELDDIVEVRRLVIT 419
Query: 1488 PTKAYCLPPEVELSNRVLRNYRSVADRFLRVTFMDEGMQTLNKNVMTYYPAPIVRDITSN 1667
PTKAYCLPP VELSNRVLRNY+ VADRFLRVTFMDEGM+ LN+NV+TYY A IVR+ITSN
Sbjct: 420 PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479
Query: 1668 SNAQKTTVFRRVKNILSEGFVLCGRKYSFLAFSANQLRDRSAWFFAEEKNTCVPDILKWM 1847
SN Q+T +F+RVK+ILS GF LCGRKYSFLAFSANQLRDRSAWFFAE+ VP I+ WM
Sbjct: 480 SNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539
Query: 1848 GRFSEKNVAKCAARMGQCFSSTYATVEVPHSEVDSELPDIVRNGYVFSDGIGMISDDLAM 2027
GRFS +NVAKCAARMGQCFSSTYATVEVP SEV+SELPDI RNGYVFSDGIGMIS DLA+
Sbjct: 540 GRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAV 599
Query: 2028 EVAERLHLKVNPPCAYQIRYAGCKGVVACWPACKDGIRLSLRLSMNKFVSKHTILEICSW 2207
EVAE+LHL VNPP AYQIRYAGCKGVVACWP DGIRLSLR SM KF S HTILEICSW
Sbjct: 600 EVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSW 659
Query: 2208 TRFQPGFLNRQIITLLSALNVCDDIFWEMQESMVYKLNQMLVNADTAFDVLTASCAEEGN 2387
TRFQPGFLNRQI+TLLS+L+V D IFWEMQ+ M+ L++MLV++D AFDV+TASCAE GN
Sbjct: 660 TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGN 719
Query: 2388 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQFGDLREKARIFVPSGRWLMGCLDELGILEQG 2567
TAAIMLSAGFKPQ+EPHLRGML+SIRA+Q GDLR KARIFVPSGRWLMGCLDELG LEQG
Sbjct: 720 TAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779
Query: 2568 QCFIQLSNPSLENCFAKHGFKFSETKKDIEVIKGYVVVAKNPCLHPGDVRILEAVDVPSL 2747
QCFIQ+S+PSLENCF KHG KFS+ KK+++V+KG VV+AKNPCLHPGDVRILEAVDVP L
Sbjct: 780 QCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGL 839
Query: 2748 HHLFDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWLPMDYAPPEVRKL 2927
HHL+DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDENLIPPSKKSW+PM+Y P EV+++
Sbjct: 840 HHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQM 899
Query: 2928 PRGVQHKDIIEFFTRNMVNENLGTICNAHVVHADSSEYGALDENCIKLAELAATAVDFPK 3107
R V H DII+FF++NMV E+LG ICNAHVVHAD SE+GALDE C+KLAELAA AVDFPK
Sbjct: 900 GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959
Query: 3108 TGKIVNMPSELKPKLYPDFMGKEEFQSYKSNKILGKLYRQITDNYYIDETASPEIKFVPK 3287
TGK+V MP +LKPK+YPDFMGKEEFQSYKS KILGKLYRQ+ D + S ++ VP
Sbjct: 960 TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPN 1019
Query: 3288 EIPYDTDLEIPGSRTFVDEAWALKCSYDEQLNGLLGQYKVNREEEVVTGHIWSMPKNSSK 3467
+IPYD+ LEIPGS F+D+AW KCSYD QL+GLLGQYKVNREEEVVTGHIWSMPK S+K
Sbjct: 1020 DIPYDSSLEIPGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079
Query: 3468 KQGEMKERLKNAYNALKKEFRKVFEHMDPKFDELSDDEKNSTFESRASAWYQVTYHPEWV 3647
KQGE+KERLK+AYN L+KEFR VFE M+P FD L DDEKN +E +ASAWYQVTY+P WV
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYNPHWV 1139
Query: 3648 KKSLQLQDPDGGTETVMLSFPWIAVDYLARIKIKHGGMKDVQHAKPINSLVRYLADKI 3821
+SL+LQ PD + TVMLSF WIA DYLARIKI+H G++ KPINSL RYL DKI
Sbjct: 1140 ARSLELQLPDAVSSTVMLSFAWIAADYLARIKIRHRGLQYSDSTKPINSLGRYLVDKI 1197
>XP_011081567.1 PREDICTED: RNA-dependent RNA polymerase 6 [Sesamum indicum]
Length = 1205
Score = 1792 bits (4641), Expect = 0.0
Identities = 877/1201 (73%), Positives = 1011/1201 (84%), Gaps = 5/1201 (0%)
Frame = +3
Query: 234 MGSEGSETDTIVTQISVGGFYNYITAKRLSEYFEDNIGGVWRCRLKTSSTPPESFPDFEI 413
MGSE + D +VTQISVGG NY+TAK L +YFEDNIG VWRCRLKTSSTPPES P++EI
Sbjct: 5 MGSEIGDNDLVVTQISVGGLENYVTAKMLLDYFEDNIGLVWRCRLKTSSTPPESNPNYEI 64
Query: 414 NTENIQRTNTYEKVEPHAFVHFVLPDSARAAHNAAGHVELILEKNPLKVSLGPENPHRMN 593
+ E++QR Y K+EPHAFVHF + SA+AA +AA ELIL + PLKVSLGP+NP+RMN
Sbjct: 65 DAESVQRKTDYVKIEPHAFVHFAVAHSAKAALDAAARGELILGRKPLKVSLGPQNPYRMN 124
Query: 594 QRRRTKAPFKLSDVRVEIGTWVSKDKFFVAWRGLPTGVDFLVDPFDGTCKFLFTKDTAFS 773
+RRRT P+KLSDV +EIG S+D+F V WRG TGVDFLVDPF+GTCK FT++TAFS
Sbjct: 125 ERRRTTTPYKLSDVLIEIGVMRSRDEFLVGWRGPRTGVDFLVDPFNGTCKLHFTRNTAFS 184
Query: 774 FKSTGNHAVIKCNYKVEFLVRDIKEIKQYTDTSHLIILLQLESSPQVYYRTADDDVEESV 953
FK AVIKCN+K+EFL R+I EI QY D S LI+LLQL SSP VYYRTADDD+EESV
Sbjct: 185 FKGEARSAVIKCNFKIEFLPREINEINQYRDFSSLIVLLQLASSPLVYYRTADDDIEESV 244
Query: 954 PFDLLDDDDPWIRTTDFTLCGAIGRCSTYRILIPPRHGIKLKKAMKYLLERRVP--SENL 1127
PFDLLDDDDPWIRTTDFT GAIGRC+TYRI PR+G L KA++YL + RVP E+
Sbjct: 245 PFDLLDDDDPWIRTTDFTPSGAIGRCNTYRISARPRNGPSLFKALEYLRKLRVPVLDESP 304
Query: 1128 RKPLQIKDEPDFGTRMSYPFFCIQFKEGISFKILFLVNAVMHKGIFNQYQLSKEFFNLLR 1307
+ L+++DEPDFG MS PFFC+Q+KEGISFKI+FLVNAVMHKGI NQ+Q+S++FF+LLR
Sbjct: 305 GRTLRVQDEPDFGMPMSDPFFCLQYKEGISFKIMFLVNAVMHKGIINQHQMSEKFFDLLR 364
Query: 1308 SQPEEVNVAALKHICASKRPDFNAYERMRRVQGWLMKNPKLLERTRELDDIVEVRRLVIT 1487
SQPEE+N+ ALKH+C+ KRP ++A + + VQ WL+ NPKLLER RE+DD+VEVRRL+IT
Sbjct: 365 SQPEELNIVALKHMCSYKRPVYDAIKALDFVQKWLLNNPKLLERPREMDDVVEVRRLIIT 424
Query: 1488 PTKAYCLPPEVELSNRVLRNYRSVADRFLRVTFMDEGMQTLNKNVMTYYPAPIVRDITSN 1667
P+KAYCLPPEVELSNRVLRNY+++ADRFLRVTFMDE MQTLNKNV+ YY +PIVRDITSN
Sbjct: 425 PSKAYCLPPEVELSNRVLRNYKNIADRFLRVTFMDEAMQTLNKNVLMYYASPIVRDITSN 484
Query: 1668 SNAQKTTVFRRVKNILSEGFVLCGRKYSFLAFSANQLRDRSAWFFAEEKNTCVPDILKWM 1847
SN Q+T +F+RVK+IL GF LCGRKY+FLAFSANQLRDRSAWFFAE+KNT V +I WM
Sbjct: 485 SNPQRTNMFKRVKDILVNGFYLCGRKYTFLAFSANQLRDRSAWFFAEDKNTGVANIKSWM 544
Query: 1848 GRFSEKNVAKCAARMGQCFSSTYATVEVPHSEVDSELPDIVRNGYVFSDGIGMISDDLAM 2027
G+F+++NVAKCAARMGQCFSSTYAT+EVP ++V+S+ PD+ RNGYVFSDGIGMIS DLA+
Sbjct: 545 GKFTQRNVAKCAARMGQCFSSTYATIEVPLTKVNSQFPDVERNGYVFSDGIGMISADLAI 604
Query: 2028 EVAERLHLKVNPPCAYQIRYAGCKGVVACWPACKDGIRLSLRLSMNKFVSKHTILEICSW 2207
EVAE+L L NPPCAYQIRYAG KGVVA WPA DG+RL LR SM KF S H LEICSW
Sbjct: 605 EVAEKLQLGSNPPCAYQIRYAGYKGVVARWPAKDDGVRLYLRRSMKKFESNHKTLEICSW 664
Query: 2208 TRFQPGFLNRQIITLLSALNVCDDIFWEMQESMVYKLNQMLVNADTAFDVLTASCAEEGN 2387
TRFQPGFLNRQI+TLLSAL V DDIFW MQE+MV +L+ ML ++DTAFDVLTASC ++GN
Sbjct: 665 TRFQPGFLNRQIVTLLSALEVQDDIFWRMQETMVSRLDWMLEDSDTAFDVLTASCTDQGN 724
Query: 2388 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQFGDLREK---ARIFVPSGRWLMGCLDELGIL 2558
TAA+MLSAGF+PQTEPHLRGMLTSIRAAQ GDL E+ ARIFVP GRWLMGCLDELG L
Sbjct: 725 TAALMLSAGFRPQTEPHLRGMLTSIRAAQLGDLSERATIARIFVPLGRWLMGCLDELGKL 784
Query: 2559 EQGQCFIQLSNPSLENCFAKHGFKFSETKKDIEVIKGYVVVAKNPCLHPGDVRILEAVDV 2738
E GQCFIQ+SNPS+E+CF KHG +FSETKK ++V+ G V +AKNPCLHPGDVRILEAVDV
Sbjct: 785 EHGQCFIQVSNPSIEDCFVKHGSQFSETKKKLQVVTGLVAIAKNPCLHPGDVRILEAVDV 844
Query: 2739 PSLHHLFDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWLPMDYAPPEV 2918
P LHHL+DCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSK+SW PM+YAP EV
Sbjct: 845 PELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWTPMEYAPGEV 904
Query: 2919 RKLPRGVQHKDIIEFFTRNMVNENLGTICNAHVVHADSSEYGALDENCIKLAELAATAVD 3098
++LPR V+H DII+FFT+NMVNE+LG ICNAHVVHAD SEYGALDE CIKLAELAATAVD
Sbjct: 905 KQLPREVKHSDIIDFFTKNMVNESLGAICNAHVVHADLSEYGALDEKCIKLAELAATAVD 964
Query: 3099 FPKTGKIVNMPSELKPKLYPDFMGKEEFQSYKSNKILGKLYRQITDNYYIDETASPEIKF 3278
FPKTGKIVNMP+ELKPK YPDFMGKEEFQSY S+KILGKLYR+I D Y D AS E F
Sbjct: 965 FPKTGKIVNMPAELKPKTYPDFMGKEEFQSYNSSKILGKLYRKIKDAYDRDHEASREHTF 1024
Query: 3279 VPKEIPYDTDLEIPGSRTFVDEAWALKCSYDEQLNGLLGQYKVNREEEVVTGHIWSMPKN 3458
+I YD DLE+ GS F+ +AW KCSYD QL GLLGQYKVNREEEVVTGHIWSMPK
Sbjct: 1025 ASDDIIYDQDLEVTGSTGFIGDAWNCKCSYDGQLIGLLGQYKVNREEEVVTGHIWSMPKY 1084
Query: 3459 SSKKQGEMKERLKNAYNALKKEFRKVFEHMDPKFDELSDDEKNSTFESRASAWYQVTYHP 3638
SSKKQGE+KERLK+AY+ L+KEFRKVFE M P+FD+L DDEKN +E +ASAWYQVTY
Sbjct: 1085 SSKKQGELKERLKHAYSTLRKEFRKVFECMGPEFDQLWDDEKNIMYERKASAWYQVTYKD 1144
Query: 3639 EWVKKSLQLQDPDGGTETVMLSFPWIAVDYLARIKIKHGGMKDVQHAKPINSLVRYLADK 3818
WVKKS +L D ++VMLSF WIA DYLARIKIK M++ KPI+SL RYLADK
Sbjct: 1145 SWVKKSKELHAVDDAGKSVMLSFAWIAADYLARIKIKRRMMENSISTKPIDSLGRYLADK 1204
Query: 3819 I 3821
I
Sbjct: 1205 I 1205
>ACA13601.1 RNA-dependent RNA polymerase [Nicotiana attenuata]
Length = 1197
Score = 1792 bits (4641), Expect = 0.0
Identities = 877/1198 (73%), Positives = 1002/1198 (83%), Gaps = 2/1198 (0%)
Frame = +3
Query: 234 MGSEGSETDTIVTQISVGGFYNYITAKRLSEYFEDNIGGVWRCRLKTSSTPPESFPDFEI 413
MGSEGSE D +VTQISVGGF N + AK LSEY E+ +G VWRCRLK SSTPP+S+P F++
Sbjct: 1 MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTFDV 60
Query: 414 NTENIQRTNTYEKVEPHAFVHFVLPDSARAAHNAAGHVELILEKNPLKVSLGPENPHRMN 593
+ E +QR YEKV PHAFVHF +SA+ A AAG ELIL K PL VSLGPENP+R+N
Sbjct: 61 DAERVQRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120
Query: 594 QRRRTKAPFKLSDVRVEIGTWVSKDKFFVAWRGLPTGVDFLVDPFDGTCKFLFTKDTAFS 773
QRRRT PFK SDV +E+G VSKD F V WRG TGVDFLVDPF+G CK LFTKDTAFS
Sbjct: 121 QRRRTTMPFKFSDVSIEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGACKILFTKDTAFS 180
Query: 774 FKSTGNHAVIKCNYKVEFLVRDIKEIKQYTDTSHLIILLQLESSPQVYYRTADDDVEESV 953
F+ HA+IKCN+K+EFLVR+I EIK+ D + L+ILLQL SSP V+YRTADDD+EESV
Sbjct: 181 FRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEESV 240
Query: 954 PFDLLDDDDPWIRTTDFTLCGAIGRCSTYRILIPPRHGIKLKKAMKYLLERRVPSENL-- 1127
FDLLDDDD WIRTTD T GAIGRC+TYRI I PR+G +KAM Y RVP +
Sbjct: 241 AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCN 300
Query: 1128 RKPLQIKDEPDFGTRMSYPFFCIQFKEGISFKILFLVNAVMHKGIFNQYQLSKEFFNLLR 1307
RK L+++DEPDFG MS PFFC Q EGISFK++FLVNAV+HKGI NQ+Q++ EFF LLR
Sbjct: 301 RKMLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359
Query: 1308 SQPEEVNVAALKHICASKRPDFNAYERMRRVQGWLMKNPKLLERTRELDDIVEVRRLVIT 1487
S EEVN+AALKH+ + K P +A +++ ++ WL+KNPKLLERT ELDDIVEVRRLVIT
Sbjct: 360 SHQEEVNLAALKHMFSYKWPVNDAIQKLVGIRKWLLKNPKLLERTGELDDIVEVRRLVIT 419
Query: 1488 PTKAYCLPPEVELSNRVLRNYRSVADRFLRVTFMDEGMQTLNKNVMTYYPAPIVRDITSN 1667
PTKAYCLPP VELSNRVLRNY+ VADRFLRVTFMDEGM+ LN+NV+TYY A IVR+ITSN
Sbjct: 420 PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479
Query: 1668 SNAQKTTVFRRVKNILSEGFVLCGRKYSFLAFSANQLRDRSAWFFAEEKNTCVPDILKWM 1847
SN Q+T +F+RVK+ILS GF LCGRKYSFLAFSANQLRDRSAWFFAE+ VP I+ WM
Sbjct: 480 SNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539
Query: 1848 GRFSEKNVAKCAARMGQCFSSTYATVEVPHSEVDSELPDIVRNGYVFSDGIGMISDDLAM 2027
GRFS +NVAKCAARMGQCFSSTYATVEVP SEV+SELPDI RNGYVFSDGIGMIS DLA+
Sbjct: 540 GRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAV 599
Query: 2028 EVAERLHLKVNPPCAYQIRYAGCKGVVACWPACKDGIRLSLRLSMNKFVSKHTILEICSW 2207
EVAE+LHL VNPP AYQIRYAGCKGVVACWP DGIRLSLR SM KF S HTILEICSW
Sbjct: 600 EVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSW 659
Query: 2208 TRFQPGFLNRQIITLLSALNVCDDIFWEMQESMVYKLNQMLVNADTAFDVLTASCAEEGN 2387
TRFQPGFLNRQI+TLLS+L+V D IFWEMQ+ M+ L++MLV++D AFDV+TASCAE GN
Sbjct: 660 TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGN 719
Query: 2388 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQFGDLREKARIFVPSGRWLMGCLDELGILEQG 2567
TAAIMLSAGFKPQ+EPHLRGML+SIRA+Q GDLR KARIFVPSGRWLMGCLDELG LEQG
Sbjct: 720 TAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779
Query: 2568 QCFIQLSNPSLENCFAKHGFKFSETKKDIEVIKGYVVVAKNPCLHPGDVRILEAVDVPSL 2747
QCFIQ+S+PSLENCF KHG KFS+ KK+++V+KG VV+AKNPCLHPGDVRILEAVDVP L
Sbjct: 780 QCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGL 839
Query: 2748 HHLFDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWLPMDYAPPEVRKL 2927
HHL+DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDENLIPPSKKSW+PM+Y P EV+++
Sbjct: 840 HHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQM 899
Query: 2928 PRGVQHKDIIEFFTRNMVNENLGTICNAHVVHADSSEYGALDENCIKLAELAATAVDFPK 3107
R V H DII+FF++NMV E+LG ICNAHVVHAD SE+GALDE C+KLAELAA AVDFPK
Sbjct: 900 GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959
Query: 3108 TGKIVNMPSELKPKLYPDFMGKEEFQSYKSNKILGKLYRQITDNYYIDETASPEIKFVPK 3287
TGK+V MP +LKPK+YPDFMGKEEFQSYKS KILGKLYRQ+ D + S ++ VP
Sbjct: 960 TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPN 1019
Query: 3288 EIPYDTDLEIPGSRTFVDEAWALKCSYDEQLNGLLGQYKVNREEEVVTGHIWSMPKNSSK 3467
+IPYD+ LEIPGS F+D+AW KCSYD QL+GLLGQYKVNREEEVVTGHIWSMPK S+K
Sbjct: 1020 DIPYDSSLEIPGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079
Query: 3468 KQGEMKERLKNAYNALKKEFRKVFEHMDPKFDELSDDEKNSTFESRASAWYQVTYHPEWV 3647
KQGE+KERLK+AYN L+KEFR VFE M+P FD L DDEKN +E +ASAWYQVTY+P WV
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYNPHWV 1139
Query: 3648 KKSLQLQDPDGGTETVMLSFPWIAVDYLARIKIKHGGMKDVQHAKPINSLVRYLADKI 3821
+SL+LQ PD + TVMLSF WIA DYLARIKI+H G++ KPINSL RYL D I
Sbjct: 1140 ARSLELQLPDAVSSTVMLSFAWIAADYLARIKIRHRGLQYSDSTKPINSLGRYLVDNI 1197
>CAR47810.1 RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 1788 bits (4632), Expect = 0.0
Identities = 880/1198 (73%), Positives = 1002/1198 (83%), Gaps = 2/1198 (0%)
Frame = +3
Query: 234 MGSEGSETDTIVTQISVGGFYNYITAKRLSEYFEDNIGGVWRCRLKTSSTPPESFPDFEI 413
MGSEGSE D +VTQISVGGF N + AK LSEY E+ +G VWRCRLK S+TPP+S+P ++I
Sbjct: 1 MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISATPPDSYPTYDI 60
Query: 414 NTENIQRTNTYEKVEPHAFVHFVLPDSARAAHNAAGHVELILEKNPLKVSLGPENPHRMN 593
+ E + R YEKV PHAFVHF +SA+ A AAG ELIL K PL VSLGPENP+R+N
Sbjct: 61 DAERVHRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120
Query: 594 QRRRTKAPFKLSDVRVEIGTWVSKDKFFVAWRGLPTGVDFLVDPFDGTCKFLFTKDTAFS 773
QRRRT PFK SDV VE+G VSKD F V WRG TGVDFLVDPF+GTCK LFTKDTAFS
Sbjct: 121 QRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTAFS 180
Query: 774 FKSTGNHAVIKCNYKVEFLVRDIKEIKQYTDTSHLIILLQLESSPQVYYRTADDDVEESV 953
F+ HA+IKCN+K+EFLVR+I EIK+ D + L+IL QL SSP V+YRTADDD+EESV
Sbjct: 181 FRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILFQLASSPLVFYRTADDDIEESV 240
Query: 954 PFDLLDDDDPWIRTTDFTLCGAIGRCSTYRILIPPRHGIKLKKAMKYLLERRVPSENL-- 1127
FDLLDDDD WIRTTD T GAIGRC+TYRI I PR+G +KAM Y RRVP +
Sbjct: 241 AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFRRVPMVEMCN 300
Query: 1128 RKPLQIKDEPDFGTRMSYPFFCIQFKEGISFKILFLVNAVMHKGIFNQYQLSKEFFNLLR 1307
RK L++KDEPDFG MS PFFC Q EGISFK++FLVNAV+HKGI NQ+Q++ EFF LLR
Sbjct: 301 RKMLRVKDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359
Query: 1308 SQPEEVNVAALKHICASKRPDFNAYERMRRVQGWLMKNPKLLERTRELDDIVEVRRLVIT 1487
S+ EEVN+AALKH+ + K P +A +++ +Q WL+KNPKLLERT ELDDIVEVRRLVIT
Sbjct: 360 SRQEEVNLAALKHMFSYKWPVNDAIQKLVGIQKWLLKNPKLLERTGELDDIVEVRRLVIT 419
Query: 1488 PTKAYCLPPEVELSNRVLRNYRSVADRFLRVTFMDEGMQTLNKNVMTYYPAPIVRDITSN 1667
PTKAYCLPP VELSNRVLRNY+ VADRFLRVTFMDEGM+ LN+NV+TYY A IVR+ITSN
Sbjct: 420 PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479
Query: 1668 SNAQKTTVFRRVKNILSEGFVLCGRKYSFLAFSANQLRDRSAWFFAEEKNTCVPDILKWM 1847
SN Q+T +F+RVK+ILS GF LCGRKYSFLAFSANQLRDRSAWFFAE+ VP I+ WM
Sbjct: 480 SNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539
Query: 1848 GRFSEKNVAKCAARMGQCFSSTYATVEVPHSEVDSELPDIVRNGYVFSDGIGMISDDLAM 2027
GRFS +NVAKCAARMGQCFSSTYATVEVP SEV+SELPDI RNGYVFSDGIGMIS DLA+
Sbjct: 540 GRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAI 599
Query: 2028 EVAERLHLKVNPPCAYQIRYAGCKGVVACWPACKDGIRLSLRLSMNKFVSKHTILEICSW 2207
EVAE+LHL VNPP AYQIRYAG KGVVACWP DGI LSLR SM KF S HTILEICSW
Sbjct: 600 EVAEKLHLNVNPPSAYQIRYAGYKGVVACWPTKNDGILLSLRPSMKKFDSNHTILEICSW 659
Query: 2208 TRFQPGFLNRQIITLLSALNVCDDIFWEMQESMVYKLNQMLVNADTAFDVLTASCAEEGN 2387
TRFQPGFLNRQI+TLLS+L+V D IFWEMQ+ M+ L++MLV++D AFDV+TASCAE GN
Sbjct: 660 TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGN 719
Query: 2388 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQFGDLREKARIFVPSGRWLMGCLDELGILEQG 2567
TAA+MLSAGFKPQ+EPHLRGML+SIRA+Q GDLR KARIFVPSGRWLMGCLDELG LEQG
Sbjct: 720 TAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779
Query: 2568 QCFIQLSNPSLENCFAKHGFKFSETKKDIEVIKGYVVVAKNPCLHPGDVRILEAVDVPSL 2747
QCFIQ+S+PSLENCF KHG KFS+ KK+++V+KG VV+AKNPCLHPGDVRILEAVDVPSL
Sbjct: 780 QCFIQVSSPSLENCFVKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSL 839
Query: 2748 HHLFDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWLPMDYAPPEVRKL 2927
HL+DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDENLIPPSKKSW+PM+Y P EV++L
Sbjct: 840 SHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQL 899
Query: 2928 PRGVQHKDIIEFFTRNMVNENLGTICNAHVVHADSSEYGALDENCIKLAELAATAVDFPK 3107
R V H DII+FF++NMV E+LG ICNAHVVHAD SE+GALDE C+KLAELAA AVDFPK
Sbjct: 900 GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959
Query: 3108 TGKIVNMPSELKPKLYPDFMGKEEFQSYKSNKILGKLYRQITDNYYIDETASPEIKFVPK 3287
TGK+V MP +LKPK+YPDFMGKEEFQSYKS KILGKLYRQ+ D + S ++ VPK
Sbjct: 960 TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPK 1019
Query: 3288 EIPYDTDLEIPGSRTFVDEAWALKCSYDEQLNGLLGQYKVNREEEVVTGHIWSMPKNSSK 3467
+IPYDT L IPGS F+D+AW KCSYD QL+GLLGQYKVNREEEVVTGHIWSMPK S+K
Sbjct: 1020 DIPYDTTLVIPGSTVFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079
Query: 3468 KQGEMKERLKNAYNALKKEFRKVFEHMDPKFDELSDDEKNSTFESRASAWYQVTYHPEWV 3647
KQGE+KERLK+AYN L+KEFR VFE MDP FD L DDEKN +E +ASAWYQVTY+P WV
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWV 1139
Query: 3648 KKSLQLQDPDGGTETVMLSFPWIAVDYLARIKIKHGGMKDVQHAKPINSLVRYLADKI 3821
+SL+LQ PD + TVMLSF WIA DYLARIKI+H G++ KPINSL RYL DKI
Sbjct: 1140 ARSLELQLPDAISSTVMLSFAWIAADYLARIKIRHRGLQYSDSTKPINSLGRYLVDKI 1197
>ADI52625.1 RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 1788 bits (4632), Expect = 0.0
Identities = 879/1198 (73%), Positives = 1002/1198 (83%), Gaps = 2/1198 (0%)
Frame = +3
Query: 234 MGSEGSETDTIVTQISVGGFYNYITAKRLSEYFEDNIGGVWRCRLKTSSTPPESFPDFEI 413
MGSEG E + +VTQISVGGF N + AK LSEY E+ +G VWRCRLK SSTPP+S+P ++I
Sbjct: 1 MGSEGCEKELVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTYDI 60
Query: 414 NTENIQRTNTYEKVEPHAFVHFVLPDSARAAHNAAGHVELILEKNPLKVSLGPENPHRMN 593
+ E +QR N YEKV PHAFVHF +SA+ A AAG ELIL K PL VSLGPENP+R+N
Sbjct: 61 DAEKVQRMNNYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120
Query: 594 QRRRTKAPFKLSDVRVEIGTWVSKDKFFVAWRGLPTGVDFLVDPFDGTCKFLFTKDTAFS 773
QRRRT PFK SDV VE+G VSKD F V WRG TGVDFLVDPF+GTCK LFTKDTAFS
Sbjct: 121 QRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTAFS 180
Query: 774 FKSTGNHAVIKCNYKVEFLVRDIKEIKQYTDTSHLIILLQLESSPQVYYRTADDDVEESV 953
F+ HA+IKCN+K+EFLVR+I EIK+ D + L+IL QL SSP V+YRTADDD+EESV
Sbjct: 181 FRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILFQLASSPLVFYRTADDDIEESV 240
Query: 954 PFDLLDDDDPWIRTTDFTLCGAIGRCSTYRILIPPRHGIKLKKAMKYLLERRVPSENL-- 1127
FDLLDDDD WIRTTD T GAIGRC+TYRI I PR+G +KAM Y RRVP +
Sbjct: 241 AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFRRVPMVEMCN 300
Query: 1128 RKPLQIKDEPDFGTRMSYPFFCIQFKEGISFKILFLVNAVMHKGIFNQYQLSKEFFNLLR 1307
RK L++KDEPDFG MS PFFC Q EGISF++LFLVNAV+HKGI NQ+Q++ EFF LLR
Sbjct: 301 RKMLRVKDEPDFGVSMSDPFFCFQ-NEGISFRVLFLVNAVLHKGIVNQHQMANEFFYLLR 359
Query: 1308 SQPEEVNVAALKHICASKRPDFNAYERMRRVQGWLMKNPKLLERTRELDDIVEVRRLVIT 1487
S EEVN AALKH+ + K P +A +++ +Q WL+KNPKLL+RT ELDDIVEVRRLVIT
Sbjct: 360 SHQEEVNSAALKHMFSYKWPVNDAIQKLAGIQKWLLKNPKLLDRTGELDDIVEVRRLVIT 419
Query: 1488 PTKAYCLPPEVELSNRVLRNYRSVADRFLRVTFMDEGMQTLNKNVMTYYPAPIVRDITSN 1667
PTKAYCLPP VELSNRVLRNY+ VADRFLRVTFMDEGM+ LN+NV+TYY A IVR+ITSN
Sbjct: 420 PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479
Query: 1668 SNAQKTTVFRRVKNILSEGFVLCGRKYSFLAFSANQLRDRSAWFFAEEKNTCVPDILKWM 1847
SN Q+T +F+RVK+ILS+GF LCGRKYSFLAFSANQLRDRSAWFFAE+ VP I+ WM
Sbjct: 480 SNPQRTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539
Query: 1848 GRFSEKNVAKCAARMGQCFSSTYATVEVPHSEVDSELPDIVRNGYVFSDGIGMISDDLAM 2027
GRFS +NVAKCAARMGQCFSSTYATVEVP SEV+SELPDI RNGYVFSDGIGMIS DLA+
Sbjct: 540 GRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAI 599
Query: 2028 EVAERLHLKVNPPCAYQIRYAGCKGVVACWPACKDGIRLSLRLSMNKFVSKHTILEICSW 2207
EVAE+LHL VNPP AYQIRYAGCKGVVACWP DGIRLSLR SM KF S HTILEICSW
Sbjct: 600 EVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSW 659
Query: 2208 TRFQPGFLNRQIITLLSALNVCDDIFWEMQESMVYKLNQMLVNADTAFDVLTASCAEEGN 2387
TRFQPGFLNRQI+TLLS+L+V D IFWEMQ+ M+ L++MLV++D AFDV+TASCAE GN
Sbjct: 660 TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGN 719
Query: 2388 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQFGDLREKARIFVPSGRWLMGCLDELGILEQG 2567
TAA+MLSAGFKPQ+EPHLRGML+SIRA+Q GDLR KARIFVPSGRWLMGCLDELG LEQG
Sbjct: 720 TAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779
Query: 2568 QCFIQLSNPSLENCFAKHGFKFSETKKDIEVIKGYVVVAKNPCLHPGDVRILEAVDVPSL 2747
QCFIQ+S+PSLENCF KHG KFS+ KK+++V+KG VV+AKNPCLHPGDVRILEAVDVPSL
Sbjct: 780 QCFIQVSSPSLENCFVKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSL 839
Query: 2748 HHLFDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWLPMDYAPPEVRKL 2927
HL+DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDENLIPPSKKSW+PM+Y P EV++L
Sbjct: 840 SHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQL 899
Query: 2928 PRGVQHKDIIEFFTRNMVNENLGTICNAHVVHADSSEYGALDENCIKLAELAATAVDFPK 3107
R V H DII+FF++NMV E+LG ICNAHVVHAD SE+GALDE C+KLAELAA AVDFPK
Sbjct: 900 GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959
Query: 3108 TGKIVNMPSELKPKLYPDFMGKEEFQSYKSNKILGKLYRQITDNYYIDETASPEIKFVPK 3287
TGK+V MP +LKPK+YPDFMGKEEFQSYKS KILGKLYRQ+ D + S ++ VPK
Sbjct: 960 TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPK 1019
Query: 3288 EIPYDTDLEIPGSRTFVDEAWALKCSYDEQLNGLLGQYKVNREEEVVTGHIWSMPKNSSK 3467
+IPYDT LEI GS TF+D+AW KCSYD QLNGLLGQYKVNREEEVVTG+IWSMPK ++K
Sbjct: 1020 DIPYDTTLEILGSTTFIDDAWNSKCSYDGQLNGLLGQYKVNREEEVVTGYIWSMPKYNAK 1079
Query: 3468 KQGEMKERLKNAYNALKKEFRKVFEHMDPKFDELSDDEKNSTFESRASAWYQVTYHPEWV 3647
KQGE+KERLK+AYN L+KEFR VFE M+P FD L DDEKN +E +ASAWYQVTYHP WV
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYHPHWV 1139
Query: 3648 KKSLQLQDPDGGTETVMLSFPWIAVDYLARIKIKHGGMKDVQHAKPINSLVRYLADKI 3821
+SL+LQ D + TVMLSF WIA DYLARIKI+H ++ KPINSL RYL D I
Sbjct: 1140 ARSLELQLADAVSNTVMLSFAWIAADYLARIKIRHRRLQYSDSTKPINSLGRYLVDNI 1197
>XP_016477231.1 PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 1788 bits (4631), Expect = 0.0
Identities = 874/1198 (72%), Positives = 1003/1198 (83%), Gaps = 2/1198 (0%)
Frame = +3
Query: 234 MGSEGSETDTIVTQISVGGFYNYITAKRLSEYFEDNIGGVWRCRLKTSSTPPESFPDFEI 413
MGSEGSE D +VTQISVGGF N + AK LSEY E+ +G VWRCRLK S+TPP+S+P ++I
Sbjct: 1 MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISATPPDSYPTYDI 60
Query: 414 NTENIQRTNTYEKVEPHAFVHFVLPDSARAAHNAAGHVELILEKNPLKVSLGPENPHRMN 593
+ E + R YEKV PHAFVHF +SA+ A AAG ELIL K PL VSLGPENP+R+N
Sbjct: 61 DAERVHRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120
Query: 594 QRRRTKAPFKLSDVRVEIGTWVSKDKFFVAWRGLPTGVDFLVDPFDGTCKFLFTKDTAFS 773
QRRRT PF+ SDV VE+G VSKD F V WRG TGVDF VDPF+G C+ LFTKDTAFS
Sbjct: 121 QRRRTTMPFRFSDVSVELGVLVSKDDFVVGWRGPRTGVDFFVDPFNGACRILFTKDTAFS 180
Query: 774 FKSTGNHAVIKCNYKVEFLVRDIKEIKQYTDTSHLIILLQLESSPQVYYRTADDDVEESV 953
F+ HA+IKCN+K+EF+VR+I EIK+ D + L+ILLQL SSP V+YRTADDD+EESV
Sbjct: 181 FRGEARHAIIKCNFKIEFMVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEESV 240
Query: 954 PFDLLDDDDPWIRTTDFTLCGAIGRCSTYRILIPPRHGIKLKKAMKYLLERRVPSENL-- 1127
FDLLDDDD WIRTTD T GAIGRC+TYRI I PR+G +KAM Y RRVP +
Sbjct: 241 AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFRRVPMVEMCN 300
Query: 1128 RKPLQIKDEPDFGTRMSYPFFCIQFKEGISFKILFLVNAVMHKGIFNQYQLSKEFFNLLR 1307
RK L+++DEPDFG MS PFFC Q EGISFK++FLVNAV+HKGI NQ+Q++ EFF LLR
Sbjct: 301 RKMLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359
Query: 1308 SQPEEVNVAALKHICASKRPDFNAYERMRRVQGWLMKNPKLLERTRELDDIVEVRRLVIT 1487
S+ EEVN+AALKH+ + K P +A +++ +Q WL+KNPKLLERT ELDDIVEVRRLVIT
Sbjct: 360 SRQEEVNLAALKHMFSYKWPVNDAIQKLVGIQKWLLKNPKLLERTGELDDIVEVRRLVIT 419
Query: 1488 PTKAYCLPPEVELSNRVLRNYRSVADRFLRVTFMDEGMQTLNKNVMTYYPAPIVRDITSN 1667
PTKAYCLPP VELSNRVLRNY+ VADRFLRVTFMDEGM+ LN+NV+TYY A IVR+ITSN
Sbjct: 420 PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479
Query: 1668 SNAQKTTVFRRVKNILSEGFVLCGRKYSFLAFSANQLRDRSAWFFAEEKNTCVPDILKWM 1847
SN Q+T +F+RVK+ILS+GF LCGRKYSFLAFSANQLRDRSAWFFAE+ VP I+ WM
Sbjct: 480 SNPQRTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539
Query: 1848 GRFSEKNVAKCAARMGQCFSSTYATVEVPHSEVDSELPDIVRNGYVFSDGIGMISDDLAM 2027
GRFS +NVAKCAARMGQCFSSTYATVEVP EV+SELPDI RNGYVFSDGIGMIS DLA+
Sbjct: 540 GRFSNRNVAKCAARMGQCFSSTYATVEVPSREVNSELPDIERNGYVFSDGIGMISADLAI 599
Query: 2028 EVAERLHLKVNPPCAYQIRYAGCKGVVACWPACKDGIRLSLRLSMNKFVSKHTILEICSW 2207
EVAE+LHL VNPP AYQIRYAGCKGVVACWP DGIRLSLR SM KF S HTILEICSW
Sbjct: 600 EVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSW 659
Query: 2208 TRFQPGFLNRQIITLLSALNVCDDIFWEMQESMVYKLNQMLVNADTAFDVLTASCAEEGN 2387
TRFQPGFLNRQI+TLLS+L+V D IFWEMQ+ M+ L++MLV++D AFDV+TASCAE GN
Sbjct: 660 TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGN 719
Query: 2388 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQFGDLREKARIFVPSGRWLMGCLDELGILEQG 2567
TAA+MLSAGFKPQ+EPHLRGML+SIRA+Q GDLR KARIFVPSGRWLMGCLDELG LEQG
Sbjct: 720 TAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779
Query: 2568 QCFIQLSNPSLENCFAKHGFKFSETKKDIEVIKGYVVVAKNPCLHPGDVRILEAVDVPSL 2747
QCFIQ+S+PSLENCF KHG KFS+ K++++V+KG VV+AKNPCLHPGDVRILEAVDVP L
Sbjct: 780 QCFIQVSSPSLENCFIKHGPKFSDIKQNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGL 839
Query: 2748 HHLFDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWLPMDYAPPEVRKL 2927
HHL+DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDENLIPPSKKSW+PM+Y P EV++L
Sbjct: 840 HHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQL 899
Query: 2928 PRGVQHKDIIEFFTRNMVNENLGTICNAHVVHADSSEYGALDENCIKLAELAATAVDFPK 3107
R V H DII+FF++NMV E+LG ICNAHVVHAD SE+GALDE C+KLAELAA AVDFPK
Sbjct: 900 GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959
Query: 3108 TGKIVNMPSELKPKLYPDFMGKEEFQSYKSNKILGKLYRQITDNYYIDETASPEIKFVPK 3287
TGK+V MP +LKPK+YPDFMGKEEFQSYKS KILGKLYRQ+ D + S ++ VP
Sbjct: 960 TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPN 1019
Query: 3288 EIPYDTDLEIPGSRTFVDEAWALKCSYDEQLNGLLGQYKVNREEEVVTGHIWSMPKNSSK 3467
+IPYD+ LEIPGS F+D+AW KCSYD QL+GLLGQYKVNREEEVVTGHIWSMPK S+K
Sbjct: 1020 DIPYDSSLEIPGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079
Query: 3468 KQGEMKERLKNAYNALKKEFRKVFEHMDPKFDELSDDEKNSTFESRASAWYQVTYHPEWV 3647
KQGE+KERLK+AYN L+KEFR VFE MDP FD L DDEKN +E +ASAWYQVTY+P WV
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWV 1139
Query: 3648 KKSLQLQDPDGGTETVMLSFPWIAVDYLARIKIKHGGMKDVQHAKPINSLVRYLADKI 3821
+SL+LQ PD + TVMLSF WIA DYLARIKI+H G++ KPINSL RYL DKI
Sbjct: 1140 ARSLELQLPDAISSTVMLSFAWIAADYLARIKIRHRGLQYSDSTKPINSLGRYLVDKI 1197
>XP_012071453.1 PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
KDP38635.1 hypothetical protein JCGZ_03988 [Jatropha
curcas]
Length = 1198
Score = 1788 bits (4630), Expect = 0.0
Identities = 865/1198 (72%), Positives = 1007/1198 (84%), Gaps = 2/1198 (0%)
Frame = +3
Query: 234 MGSEGSETDTIVTQISVGGFYNYITAKRLSEYFEDNIGGVWRCRLKTSSTPPESFPDFEI 413
MG+E SE DT+VTQ+S GGF N++ AK L Y E+ IG VWRCRLKTS TPPES+P+F+I
Sbjct: 1 MGTERSEKDTVVTQVSFGGFENHVNAKDLVAYLEEVIGQVWRCRLKTSWTPPESYPNFKI 60
Query: 414 -NTENIQRTNTYEKVEPHAFVHFVLPDSARAAHNAAGHVELILEKNPLKVSLGPENPHRM 590
+T I RTN Y++VEPHAFVHF L +SA A NAAG EL L PLKVSLGPENP +
Sbjct: 61 TDTAGIHRTNEYKRVEPHAFVHFALAESATWAKNAAGRCELFLNDRPLKVSLGPENPFTL 120
Query: 591 NQRRRTKAPFKLSDVRVEIGTWVSKDKFFVAWRGLPTGVDFLVDPFDGTCKFLFTKDTAF 770
NQRRR P KLSDV +EIG VS+D+F V WRG P+GVDFLVDPFDGTCKF FT+DTAF
Sbjct: 121 NQRRRKTIPSKLSDVCIEIGMMVSRDEFLVGWRGPPSGVDFLVDPFDGTCKFCFTRDTAF 180
Query: 771 SFKSTGNHAVIKCNYKVEFLVRDIKEIKQYTDTSHLIILLQLESSPQVYYRTADDDVEES 950
S K T HAVI+C++K+EFLVRDI EIKQY DTS+L+ILLQL S+P V+YRTADDD+E
Sbjct: 181 SIKDTNKHAVIRCDFKLEFLVRDINEIKQYKDTSYLVILLQLASAPWVWYRTADDDIEVL 240
Query: 951 VPFDLLDDDDPWIRTTDFTLCGAIGRCSTYRILIPPRHGIKLKKAMKYLLERRVPSENLR 1130
VPF+LLDDDDPWIRTTDFT GAIGRC++YR+ IPPRHG KL++A+ YL ERRV ++LR
Sbjct: 241 VPFNLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLERAINYLKERRVQVDSLR 300
Query: 1131 KPLQIKDEPDFGTRMSYPFFCIQFKEGISFKILFLVNAVMHKGIFNQYQLSKEFFNLLRS 1310
+PL+I +EPD+G MS PFFCI KEGI+F+I+FLVNAVMHKGIFNQ+QLS +FF+LLR+
Sbjct: 301 RPLKILNEPDYGMPMSDPFFCIHRKEGIAFEIVFLVNAVMHKGIFNQHQLSDDFFDLLRN 360
Query: 1311 QPEEVNVAALKHICASKRPDFNAYERMRRVQGWLMKNPKLLERTRELDDIVEVRRLVITP 1490
QP ++NVAALKHIC+ KRP F+A+ R++ VQ WL+KNPKL + ++LDDIV++RRL ITP
Sbjct: 361 QPADINVAALKHICSYKRPVFDAHRRLKAVQEWLLKNPKLFKCPKQLDDIVQIRRLAITP 420
Query: 1491 TKAYCLPPEVELSNRVLRNYRSVADRFLRVTFMDEGMQTLNKNVMTYYPAPIVRDITSNS 1670
T+AYCLPPE+ELSNRVLR Y++ ADRFLRVTFMDEG+QT+N N +TYY APIVRDITS S
Sbjct: 421 TRAYCLPPEIELSNRVLRKYKNFADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITSTS 480
Query: 1671 NAQKTTVFRRVKNILSEGFVLCGRKYSFLAFSANQLRDRSAWFFAEEKNTCVPDILKWMG 1850
+QKT +F+RVK+IL++GF LCGR+YSFLAFS+NQLRDRSAWFFAE+ V I KWMG
Sbjct: 481 FSQKTRIFKRVKSILTDGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDGKIRVDQIRKWMG 540
Query: 1851 RFSEKNVAKCAARMGQCFSSTYATVEVPHSEVDSELPDIVRNGYVFSDGIGMISDDLAME 2030
+F+ KN+AKCAARMGQCFSSTYATVEVP +EV+ PDI RNGY FSDGIGMI+ DLA
Sbjct: 541 KFTNKNIAKCAARMGQCFSSTYATVEVPSAEVNLAHPDIERNGYTFSDGIGMITPDLAKA 600
Query: 2031 VAERLHLKVNPPCAYQIRYAGCKGVVACWPACKDGIRLSLRLSMNKFVSKHTILEICSWT 2210
VAE+L L +NPPCAYQIRYAGCKGVVACWPA DGIRLSLR SMNKF S HT LEICSWT
Sbjct: 601 VAEKLKLDINPPCAYQIRYAGCKGVVACWPAQGDGIRLSLRPSMNKFQSNHTTLEICSWT 660
Query: 2211 RFQPGFLNRQIITLLSALNVCDDIFWEMQESMVYKLNQMLVNADTAFDVLTASCAEEGNT 2390
RFQPGFLNRQIITLLS LNV D+IFW+MQ +MV KLN+ML +AD AFDV+TASC E+GNT
Sbjct: 661 RFQPGFLNRQIITLLSTLNVSDEIFWKMQIAMVSKLNKMLTDADVAFDVITASCTEQGNT 720
Query: 2391 AAIMLSAGFKPQTEPHLRGMLTSIRAAQFGDLREKARIFVPSGRWLMGCLDELGILEQGQ 2570
AA+MLSAGFKPQ EPHLRGMLT IRAAQF DLREKARIFV SGRWLMGCLDELG+LEQGQ
Sbjct: 721 AALMLSAGFKPQNEPHLRGMLTCIRAAQFCDLREKARIFVSSGRWLMGCLDELGVLEQGQ 780
Query: 2571 CFIQLSNPSLENCFAKHGFKFSETKKDIEVIKGYVVVAKNPCLHPGDVRILEAVDVPSLH 2750
CFIQ+SNPSLE CF+KHG +FSETKK+++VI G VV+AKNPCLHPGDVRILEAVD P L
Sbjct: 781 CFIQVSNPSLETCFSKHGSRFSETKKNLQVITGTVVIAKNPCLHPGDVRILEAVDAPGLC 840
Query: 2751 HLFDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWLPMDYAPPEVRKLP 2930
HL DCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSK+SW PM Y E + L
Sbjct: 841 HLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKQSWTPMQYDAAEPKLLS 900
Query: 2931 RGVQHKDIIEFFTRNMVNENLGTICNAHVVHADSSEYGALDENCIKLAELAATAVDFPKT 3110
R V H+DII+FF +NMVNE+LG ICNAHVV AD SEYGALDENCIKLAELAATAVDFPKT
Sbjct: 901 RPVSHQDIIDFFAKNMVNESLGAICNAHVVRADLSEYGALDENCIKLAELAATAVDFPKT 960
Query: 3111 GKIVNMPSELKPKLYPDFMGKEEFQSYKSNKILGKLYRQITDNYYIDE-TASPEIKFVPK 3287
GK+V +P LKPK+YPDFMGKEE+QSYKS KILG+LYR I D Y D+ AS E+
Sbjct: 961 GKLVTLPQYLKPKMYPDFMGKEEYQSYKSTKILGRLYRDIKDAYGDDDAAASSELNCSSG 1020
Query: 3288 EIPYDTDLEIPGSRTFVDEAWALKCSYDEQLNGLLGQYKVNREEEVVTGHIWSMPKNSSK 3467
+IPYDT+LE+ GS ++ EAW KCSYD QL GLLGQYKV +EEE+VTGHIWSMP +S+
Sbjct: 1021 DIPYDTNLEVLGSADYILEAWDQKCSYDGQLKGLLGQYKVKKEEELVTGHIWSMPMYNSR 1080
Query: 3468 KQGEMKERLKNAYNALKKEFRKVFEHMDPKFDELSDDEKNSTFESRASAWYQVTYHPEWV 3647
K GE+KERLK++Y+ALKKEFR+VFE MD F++L+DDEKN +E +ASAWYQVTYHP+W+
Sbjct: 1081 KLGELKERLKHSYSALKKEFRQVFEKMDLDFEQLTDDEKNLLYERKASAWYQVTYHPKWI 1140
Query: 3648 KKSLQLQDPDGGTETVMLSFPWIAVDYLARIKIKHGGMKDVQHAKPINSLVRYLADKI 3821
KKSL+LQ+PD +LSF WIA DYLARIKIKH G + V AKP+NSLV+YLAD+I
Sbjct: 1141 KKSLELQEPDAAGNATILSFAWIAADYLARIKIKHRGTEGVDTAKPVNSLVKYLADRI 1198
>APR63701.1 SILENCING DEFECTIVE family protein 1 [Populus tomentosa]
Length = 1199
Score = 1787 bits (4629), Expect = 0.0
Identities = 866/1199 (72%), Positives = 1001/1199 (83%), Gaps = 3/1199 (0%)
Frame = +3
Query: 234 MGSEGSETDTIVTQISVGGFYNYITAKRLSEYFEDNIGGVWRCRLKTSSTPPESFPDFEI 413
M +EGS +T+VTQ+S+GGF ++TAK L EY E IG VWRCRLKTS TPPES+P+FEI
Sbjct: 1 METEGSAKETVVTQVSLGGFDIHVTAKDLLEYLEREIGLVWRCRLKTSWTPPESYPNFEI 60
Query: 414 -NTENIQRTNTYEKVEPHAFVHFVLPDSARAAHNAAGHVELILEKNPLKVSLGPENPHRM 590
+ I RT Y +VEPHAFVHF LP SA A +AA EL L LK SLGPENP +
Sbjct: 61 TDITKITRTEDYRRVEPHAFVHFALPQSATCAIDAADRCELFLNNKGLKASLGPENPFTL 120
Query: 591 NQRRRTKAPFKLSDVRVEIGTWVSKDKFFVAWRGLPTGVDFLVDPFDGTCKFLFTKDTAF 770
NQRRR PFKLS V VEIGT VS+D+FFV WRG PTGVDFLVDPFDGTC+F F+++TAF
Sbjct: 121 NQRRRKTTPFKLSGVGVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRNTAF 180
Query: 771 SFKSTGNHAVIKCNYKVEFLVRDIKEIKQYTDTSHLIILLQLESSPQVYYRTADDDVEES 950
SFKST HAVIKC++KVEFLVRDI EIKQYT+TS L++LLQL S+P+V+YRTADDD+E S
Sbjct: 181 SFKSTAEHAVIKCDFKVEFLVRDINEIKQYTETSCLVLLLQLASAPRVWYRTADDDIEVS 240
Query: 951 VPFDLLDDDDPWIRTTDFTLCGAIGRCSTYRILIPPRHGIKLKKAMKYLLERRVPSENLR 1130
VPFDLLDDDDPWIRTTDFT GAIGRC +YR+ IPPRHG KL+KA+ +L ERRV E LR
Sbjct: 241 VPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEEYLR 300
Query: 1131 KPLQIKDEPDFGTRMSYPFFCIQFKEGISFKILFLVNAVMHKGIFNQYQLSKEFFNLLRS 1310
+P++I+DEPDFG M+ PFFCI KEGI+F +LFLVNAVMHKGIFNQ+QLS +FF+LLR+
Sbjct: 301 RPIRIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLRN 360
Query: 1311 QPEEVNVAALKHICASKRPDFNAYERMRRVQGWLMKNPKLLERTRELDDIVEVRRLVITP 1490
QP EVNVAALKHI +RP F+AY++++ Q WL+KNPK + ++LDDI E+RRLVITP
Sbjct: 361 QPTEVNVAALKHIYPYRRPVFDAYKKLKVAQEWLLKNPKFFKNQKKLDDIAEIRRLVITP 420
Query: 1491 TKAYCLPPEVELSNRVLRNYRSVADRFLRVTFMDEGMQTLNKNVMTYYPAPIVRDITSNS 1670
TKAYCLPPEVELSNRVLR Y+ VADRFLRVTFMDEG+QT+N N + Y+ APIVR ITS S
Sbjct: 421 TKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNSNALNYFAAPIVRAITSYS 480
Query: 1671 NAQKTTVFRRVKNILSEGFVLCGRKYSFLAFSANQLRDRSAWFFAEEKNTCVPDILKWMG 1850
QKT +F+RV++IL+EGF LCGR+YSFLAFS+NQLRDRSAWFFAE++N V I WMG
Sbjct: 481 FPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVMAIKSWMG 540
Query: 1851 RFSEKNVAKCAARMGQCFSSTYATVEVPHSEVDSELPDIVRNGYVFSDGIGMISDDLAME 2030
+F+ KN+AKCAARMGQCFSSTYAT+EVP EV+S+LPDI RNGY FSDGIGMI+ DLA E
Sbjct: 541 KFTNKNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITPDLARE 600
Query: 2031 VAERLHLKVNPPCAYQIRYAGCKGVVACWPACKDGIRLSLRLSMNKFVSKHTILEICSWT 2210
VAE+L +PPCAYQIRYAGCKGVVACWP DGIRLSLR SMNKF S HTILEICSWT
Sbjct: 601 VAEKLKFDFDPPCAYQIRYAGCKGVVACWPEQGDGIRLSLRSSMNKFQSNHTILEICSWT 660
Query: 2211 RFQPGFLNRQIITLLSALNVCDDIFWEMQESMVYKLNQMLVNADTAFDVLTASCAEEGNT 2390
RFQPGFLNRQIITLLSALNV D +FW+MQE MV KLNQMLV++D AFDVLTASCAE+GN
Sbjct: 661 RFQPGFLNRQIITLLSALNVPDAVFWKMQELMVSKLNQMLVDSDVAFDVLTASCAEQGNV 720
Query: 2391 AAIMLSAGFKPQTEPHLRGMLTSIRAAQFGDLREKARIFVPSGRWLMGCLDELGILEQGQ 2570
AAIMLSAGFKPQ EPHLRGMLT +RAAQ LREKARIFVPSGRWLMGCLDELG+LEQGQ
Sbjct: 721 AAIMLSAGFKPQKEPHLRGMLTCVRAAQLWGLREKARIFVPSGRWLMGCLDELGVLEQGQ 780
Query: 2571 CFIQLSNPSLENCFAKHGFKFSETKKDIEVIKGYVVVAKNPCLHPGDVRILEAVDVPSLH 2750
CFIQ+SN LENCF KHG KFSETKK+++V+KG VV+AKNPCLHPGD+RILEAVD P LH
Sbjct: 781 CFIQVSNSYLENCFVKHGSKFSETKKNLQVVKGTVVIAKNPCLHPGDIRILEAVDAPGLH 840
Query: 2751 HLFDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWLPMDYAPPEVRKLP 2930
HL+DCLVFPQKG+RPH NEASGSDLDGDLYFVTWDENLIPPSK+SW+PM Y E ++L
Sbjct: 841 HLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKQLT 900
Query: 2931 RGVQHKDIIEFFTRNMVNENLGTICNAHVVHADSSEYGALDENCIKLAELAATAVDFPKT 3110
R V H+DI+EFF +NM NENLG ICNAHVV AD SEYGALDE C+ LAELAATAVDFPKT
Sbjct: 901 RPVNHQDIVEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAVDFPKT 960
Query: 3111 GKIVNMPSELKPKLYPDFMGKEEFQSYKSNKILGKLYRQITDNYYIDE-TASPEIKFVP- 3284
GKIV+MPS+LKPK+YPDFMGKEE QSYKS KILG+LYRQI D Y D+ AS E FVP
Sbjct: 961 GKIVSMPSDLKPKIYPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAASSERNFVPA 1020
Query: 3285 KEIPYDTDLEIPGSRTFVDEAWALKCSYDEQLNGLLGQYKVNREEEVVTGHIWSMPKNSS 3464
+IPYD DLE+ G+ ++ +AW KCSYD QLNGLL QYKV REEEVVTGH+WSMPK SS
Sbjct: 1021 ADIPYDLDLEVLGATDYISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVWSMPKGSS 1080
Query: 3465 KKQGEMKERLKNAYNALKKEFRKVFEHMDPKFDELSDDEKNSTFESRASAWYQVTYHPEW 3644
+KQG++KERLK++YN LK+EFR+VFE MD +L DD KN +E +ASAWYQVTYHP W
Sbjct: 1081 RKQGDLKERLKHSYNCLKREFRQVFEKMDLDLGQLDDDIKNMLYERKASAWYQVTYHPHW 1140
Query: 3645 VKKSLQLQDPDGGTETVMLSFPWIAVDYLARIKIKHGGMKDVQHAKPINSLVRYLADKI 3821
++KSL+LQD DG +VMLSF WIA DYLARIKI+H + +V AKP+NSL +YLAD++
Sbjct: 1141 IQKSLELQDSDGAGISVMLSFAWIAADYLARIKIRHSRIGNVDSAKPVNSLAKYLADRM 1199
>XP_009758053.1 PREDICTED: RNA-dependent RNA polymerase 6 [Nicotiana sylvestris]
Length = 1197
Score = 1787 bits (4629), Expect = 0.0
Identities = 875/1198 (73%), Positives = 1001/1198 (83%), Gaps = 2/1198 (0%)
Frame = +3
Query: 234 MGSEGSETDTIVTQISVGGFYNYITAKRLSEYFEDNIGGVWRCRLKTSSTPPESFPDFEI 413
MGSEGSE D +VTQISVGGF N + AK LSEY E+ +G VWRCRLK S+TPP+S+P ++I
Sbjct: 1 MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISATPPDSYPTYDI 60
Query: 414 NTENIQRTNTYEKVEPHAFVHFVLPDSARAAHNAAGHVELILEKNPLKVSLGPENPHRMN 593
+ E + R YEKV PHAFVHF +SA+ A AAG ELIL K PL VSLGPENP+R+N
Sbjct: 61 DAERVHRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120
Query: 594 QRRRTKAPFKLSDVRVEIGTWVSKDKFFVAWRGLPTGVDFLVDPFDGTCKFLFTKDTAFS 773
QRRRT PF+ SDV VE+G VSKD F V WRG TGVDF VDPF+G C+ LFTKDTAFS
Sbjct: 121 QRRRTTMPFRFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGACRILFTKDTAFS 180
Query: 774 FKSTGNHAVIKCNYKVEFLVRDIKEIKQYTDTSHLIILLQLESSPQVYYRTADDDVEESV 953
F+ HA+IKCN+K+EF+VR+I EIK+ D + L+ILLQL SSP V+YRTADDD+EESV
Sbjct: 181 FRGEARHAIIKCNFKIEFMVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEESV 240
Query: 954 PFDLLDDDDPWIRTTDFTLCGAIGRCSTYRILIPPRHGIKLKKAMKYLLERRVPSENL-- 1127
FDLLDDDD WIRTTD T GAIGRC+TYRI I PR+G +KAM Y RVP +
Sbjct: 241 AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCN 300
Query: 1128 RKPLQIKDEPDFGTRMSYPFFCIQFKEGISFKILFLVNAVMHKGIFNQYQLSKEFFNLLR 1307
RK L+++DEPDFG MS PFFC Q EGISFK++FLVNAV+HKGI NQ+Q++ EFF LLR
Sbjct: 301 RKMLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359
Query: 1308 SQPEEVNVAALKHICASKRPDFNAYERMRRVQGWLMKNPKLLERTRELDDIVEVRRLVIT 1487
S+ EEVN+AALKH+ + K P +A +++ +Q WLMKNPKLLERT ELDDIVEVRRLVIT
Sbjct: 360 SRQEEVNLAALKHMFSYKWPVNDAIQKLVGIQKWLMKNPKLLERTGELDDIVEVRRLVIT 419
Query: 1488 PTKAYCLPPEVELSNRVLRNYRSVADRFLRVTFMDEGMQTLNKNVMTYYPAPIVRDITSN 1667
PTKAYCLPP VELSNRVLRNY+ VADRFLRVTFMDEGM+ LN+NV+TYY A IVR+ITSN
Sbjct: 420 PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479
Query: 1668 SNAQKTTVFRRVKNILSEGFVLCGRKYSFLAFSANQLRDRSAWFFAEEKNTCVPDILKWM 1847
SN Q+T +F+RVK+ILS GF LCGRKYSFLAFSANQLRDRSAWFFAE+ VP I+ WM
Sbjct: 480 SNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539
Query: 1848 GRFSEKNVAKCAARMGQCFSSTYATVEVPHSEVDSELPDIVRNGYVFSDGIGMISDDLAM 2027
GRFS +NVAKCAARMGQCFSSTYATVEVP EV+SELPDI RNGYVFSDGIGMIS DLA+
Sbjct: 540 GRFSNRNVAKCAARMGQCFSSTYATVEVPSREVNSELPDIERNGYVFSDGIGMISADLAI 599
Query: 2028 EVAERLHLKVNPPCAYQIRYAGCKGVVACWPACKDGIRLSLRLSMNKFVSKHTILEICSW 2207
EVAE+LHL VNPP AYQIRYAGCKGVVACWP DGIRLSLR SM KF S HTILEICSW
Sbjct: 600 EVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSW 659
Query: 2208 TRFQPGFLNRQIITLLSALNVCDDIFWEMQESMVYKLNQMLVNADTAFDVLTASCAEEGN 2387
TRFQPGFLNRQI+TLLS+L+V D IFWEMQ+ M+ L++MLV++D AFDV+TASCAE GN
Sbjct: 660 TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGN 719
Query: 2388 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQFGDLREKARIFVPSGRWLMGCLDELGILEQG 2567
TAAIMLSAGFKPQ+EPHLRGML+SIRA+Q GDLR KARIFVPSGRWLMGCLDELG LEQG
Sbjct: 720 TAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779
Query: 2568 QCFIQLSNPSLENCFAKHGFKFSETKKDIEVIKGYVVVAKNPCLHPGDVRILEAVDVPSL 2747
QCFIQ+S+PSLENCF KHG KFS+ K++++V+KG VV+AKNPCLHPGDVRILEAVDVP L
Sbjct: 780 QCFIQVSSPSLENCFIKHGPKFSDIKQNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGL 839
Query: 2748 HHLFDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWLPMDYAPPEVRKL 2927
HHL+DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDENLIPPSKKSW+PM+Y P EV++L
Sbjct: 840 HHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQL 899
Query: 2928 PRGVQHKDIIEFFTRNMVNENLGTICNAHVVHADSSEYGALDENCIKLAELAATAVDFPK 3107
R V H DII+FF++NMV E+LG ICNAHVVHAD SE+GALDE C+KLAELAA AVDFPK
Sbjct: 900 GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959
Query: 3108 TGKIVNMPSELKPKLYPDFMGKEEFQSYKSNKILGKLYRQITDNYYIDETASPEIKFVPK 3287
TGK+V MP +LKPK+YPDFMGKEEFQSYKS KILGKLYRQ+ D + S ++ VP
Sbjct: 960 TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPN 1019
Query: 3288 EIPYDTDLEIPGSRTFVDEAWALKCSYDEQLNGLLGQYKVNREEEVVTGHIWSMPKNSSK 3467
+IPYD+ LEIPGS F+D+AW KCSYD QL+GLLGQYKVNREEEVVTGHIWSMPK S+K
Sbjct: 1020 DIPYDSSLEIPGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079
Query: 3468 KQGEMKERLKNAYNALKKEFRKVFEHMDPKFDELSDDEKNSTFESRASAWYQVTYHPEWV 3647
KQGE+KERLK+AYN L+KEFR VFE MDP FD L DDEKN +E +ASAWYQVTY+P WV
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWV 1139
Query: 3648 KKSLQLQDPDGGTETVMLSFPWIAVDYLARIKIKHGGMKDVQHAKPINSLVRYLADKI 3821
+SL+LQ PD + TVMLSF WIA DYLARIKI+H G++ KPINSL RYL DKI
Sbjct: 1140 ARSLELQLPDAISSTVMLSFAWIAADYLARIKIRHRGLQYSDSTKPINSLGRYLVDKI 1197
>XP_012076580.1 PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
KDP33599.1 hypothetical protein JCGZ_07170 [Jatropha
curcas]
Length = 1199
Score = 1787 bits (4629), Expect = 0.0
Identities = 863/1198 (72%), Positives = 1005/1198 (83%), Gaps = 2/1198 (0%)
Frame = +3
Query: 234 MGSEGSETDTIVTQISVGGFYNYITAKRLSEYFEDNIGGVWRCRLKTSSTPPESFPDFEI 413
M ++ SE DT+VTQ+S GGF N++ AK L Y E+ IG VWRCRLKTS TPPES+P+FEI
Sbjct: 1 METQKSEKDTVVTQVSFGGFDNHVKAKDLVAYLEEEIGQVWRCRLKTSWTPPESYPNFEI 60
Query: 414 -NTENIQRTNTYEKVEPHAFVHFVLPDSARAAHNAAGHVELILEKNPLKVSLGPENPHRM 590
+ I RT+ Y++VEPHAFVHF +SA A NAAGH EL L PLKVSLGPENP +
Sbjct: 61 TDAAAIHRTHEYKRVEPHAFVHFASAESATWAKNAAGHCELFLNDRPLKVSLGPENPFHL 120
Query: 591 NQRRRTKAPFKLSDVRVEIGTWVSKDKFFVAWRGLPTGVDFLVDPFDGTCKFLFTKDTAF 770
NQRRR PFKLSDV +EIGT VS+D+F V WRG +GVDFLVDPFDGTCKF FT DTAF
Sbjct: 121 NQRRRKNIPFKLSDVCIEIGTLVSRDEFLVGWRGPSSGVDFLVDPFDGTCKFCFTMDTAF 180
Query: 771 SFKSTGNHAVIKCNYKVEFLVRDIKEIKQYTDTSHLIILLQLESSPQVYYRTADDDVEES 950
S K T HA+I+C++K+EFLVRDI E+KQYTDTS ++ILLQL S+P V+YRTADDD+E S
Sbjct: 181 SIKDTTKHAIIRCDFKLEFLVRDINEVKQYTDTSCIVILLQLASAPLVWYRTADDDIEVS 240
Query: 951 VPFDLLDDDDPWIRTTDFTLCGAIGRCSTYRILIPPRHGIKLKKAMKYLLERRVPSENLR 1130
VPFDLLDDDDPWIRTTDFT GAIGRC+ YR+ IPPRHG KLK+A +L ERRV ++LR
Sbjct: 241 VPFDLLDDDDPWIRTTDFTPSGAIGRCNFYRVSIPPRHGAKLKRARNFLKERRVQEDSLR 300
Query: 1131 KPLQIKDEPDFGTRMSYPFFCIQFKEGISFKILFLVNAVMHKGIFNQYQLSKEFFNLLRS 1310
+PL+I +EPD+G MS PFFCI KEGI+F+I+FLVNAVMHKGIFNQ+QLS FF+LLR+
Sbjct: 301 RPLKIVNEPDYGMPMSDPFFCIHHKEGIAFEIMFLVNAVMHKGIFNQHQLSDNFFDLLRN 360
Query: 1311 QPEEVNVAALKHICASKRPDFNAYERMRRVQGWLMKNPKLLERTRELDDIVEVRRLVITP 1490
Q ++NVAALKHIC+ K+P F+A++ ++ VQ WL+KNPKL +R+++LDDIVE+RRL +TP
Sbjct: 361 QSLDINVAALKHICSYKQPVFDAHKGLKAVQEWLLKNPKLFKRSKQLDDIVEIRRLALTP 420
Query: 1491 TKAYCLPPEVELSNRVLRNYRSVADRFLRVTFMDEGMQTLNKNVMTYYPAPIVRDITSNS 1670
T+AYCLPPEVELSNRVLR Y+++ADRFLRVTFMDEG+QT+N N +TYY APIVRDITS S
Sbjct: 421 TRAYCLPPEVELSNRVLRKYKNIADRFLRVTFMDEGLQTINANTLTYYVAPIVRDITSTS 480
Query: 1671 NAQKTTVFRRVKNILSEGFVLCGRKYSFLAFSANQLRDRSAWFFAEEKNTCVPDILKWMG 1850
+QKT +FRRVK+IL++GF LCGR+YSFLAFS+NQLRDRSAWFFAE+ V I KWMG
Sbjct: 481 FSQKTRIFRRVKSILTDGFNLCGRRYSFLAFSSNQLRDRSAWFFAEDGKISVGQIRKWMG 540
Query: 1851 RFSEKNVAKCAARMGQCFSSTYATVEVPHSEVDSELPDIVRNGYVFSDGIGMISDDLAME 2030
RF+ +N+AKCAARMGQCFSSTYATVEVP SEV+ LPDI RNGY+FSDGIG I+ DLA E
Sbjct: 541 RFTNRNIAKCAARMGQCFSSTYATVEVPSSEVNHALPDIERNGYIFSDGIGTITPDLAKE 600
Query: 2031 VAERLHLKVNPPCAYQIRYAGCKGVVACWPACKDGIRLSLRLSMNKFVSKHTILEICSWT 2210
VAE+L L +N PCAYQIRYAGCKGVVACWPA DGIRLSLR SMNKF S HT LEICSWT
Sbjct: 601 VAEKLKLDINLPCAYQIRYAGCKGVVACWPAQGDGIRLSLRPSMNKFQSNHTTLEICSWT 660
Query: 2211 RFQPGFLNRQIITLLSALNVCDDIFWEMQESMVYKLNQMLVNADTAFDVLTASCAEEGNT 2390
RFQPGFLNRQIITLLS LNV D++FWEMQ +MV KLN+ML +AD AFDV+T SCAE+GNT
Sbjct: 661 RFQPGFLNRQIITLLSTLNVSDEVFWEMQTAMVSKLNKMLTDADVAFDVITKSCAEQGNT 720
Query: 2391 AAIMLSAGFKPQTEPHLRGMLTSIRAAQFGDLREKARIFVPSGRWLMGCLDELGILEQGQ 2570
AAIMLSAGFKPQ EPHLRGMLT IRAAQF LREKARIFV SGRWLMGCLDELG+LEQGQ
Sbjct: 721 AAIMLSAGFKPQNEPHLRGMLTCIRAAQFWGLREKARIFVTSGRWLMGCLDELGVLEQGQ 780
Query: 2571 CFIQLSNPSLENCFAKHGFKFSETKKDIEVIKGYVVVAKNPCLHPGDVRILEAVDVPSLH 2750
CFIQ+SNP LE CF+KHG KFSETKK+++VIKG VV+AKNPCLHPGDVRILEAVD P LH
Sbjct: 781 CFIQVSNPCLETCFSKHGSKFSETKKNLQVIKGTVVIAKNPCLHPGDVRILEAVDAPGLH 840
Query: 2751 HLFDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWLPMDYAPPEVRKLP 2930
HL DCLVFPQKGDRPHTNEASGSDLDGDLYFVTWD+NLIPPSKKSW PM Y E + L
Sbjct: 841 HLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKKSWTPMQYDAAEAKLLN 900
Query: 2931 RGVQHKDIIEFFTRNMVNENLGTICNAHVVHADSSEYGALDENCIKLAELAATAVDFPKT 3110
R V H+DII+FF +NMVNENLG ICNAHVVHAD SE+GALDENCIKLAELAATAVDFPKT
Sbjct: 901 RPVSHQDIIDFFAKNMVNENLGAICNAHVVHADLSEHGALDENCIKLAELAATAVDFPKT 960
Query: 3111 GKIVNMPSELKPKLYPDFMGKEEFQSYKSNKILGKLYRQITDNYYIDETAS-PEIKFVPK 3287
GK+V MP LKPK+YPDFMGKEE+QSYKS KILG+LYRQI D Y D+ A+ E+ +
Sbjct: 961 GKLVTMPPYLKPKMYPDFMGKEEYQSYKSTKILGRLYRQIIDAYGDDDAAAFSELNCLSG 1020
Query: 3288 EIPYDTDLEIPGSRTFVDEAWALKCSYDEQLNGLLGQYKVNREEEVVTGHIWSMPKNSSK 3467
+IPYD DLE+ GS ++ EAW KCSYD QL GLLGQYKV REEE+VTGHIWSMP ++S+
Sbjct: 1021 DIPYDADLEVLGSADYILEAWDQKCSYDGQLKGLLGQYKVKREEELVTGHIWSMPMSNSR 1080
Query: 3468 KQGEMKERLKNAYNALKKEFRKVFEHMDPKFDELSDDEKNSTFESRASAWYQVTYHPEWV 3647
KQG++KERLK++Y+ALKKEFR+VFE M+ ++L+DDEKN +E +ASAWYQV YHP+W+
Sbjct: 1081 KQGDLKERLKHSYSALKKEFRQVFEGMNLDVEQLTDDEKNLQYERKASAWYQVAYHPKWI 1140
Query: 3648 KKSLQLQDPDGGTETVMLSFPWIAVDYLARIKIKHGGMKDVQHAKPINSLVRYLADKI 3821
KKSL+LQ+ D MLSF WIA DYLARIKIK G + + AKP+NSLV+YL D+I
Sbjct: 1141 KKSLELQESDAPGNATMLSFSWIAADYLARIKIKRRGTEGIDTAKPVNSLVKYLTDRI 1198
>NP_001312583.1 RNA-dependent RNA polymerase 6 [Nicotiana tabacum] BAF96019.1
RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
Length = 1197
Score = 1785 bits (4623), Expect = 0.0
Identities = 877/1198 (73%), Positives = 1001/1198 (83%), Gaps = 2/1198 (0%)
Frame = +3
Query: 234 MGSEGSETDTIVTQISVGGFYNYITAKRLSEYFEDNIGGVWRCRLKTSSTPPESFPDFEI 413
MGSEGSE + +VTQIS GGF N + AK LSEY E+ +G VWRCRLK SSTPP+S+P ++I
Sbjct: 1 MGSEGSEKELVVTQISGGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISSTPPDSYPTYDI 60
Query: 414 NTENIQRTNTYEKVEPHAFVHFVLPDSARAAHNAAGHVELILEKNPLKVSLGPENPHRMN 593
+ E +QR N YEKV PHAFVHF +SA+ A AAG ELIL K PL VSLGPENP+R+N
Sbjct: 61 DAEKVQRMNNYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLN 120
Query: 594 QRRRTKAPFKLSDVRVEIGTWVSKDKFFVAWRGLPTGVDFLVDPFDGTCKFLFTKDTAFS 773
QRRRT PFK SDV VE+G VSKD F V WRG TGVDF VDPF+GTCK LFTKDTAFS
Sbjct: 121 QRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGTCKILFTKDTAFS 180
Query: 774 FKSTGNHAVIKCNYKVEFLVRDIKEIKQYTDTSHLIILLQLESSPQVYYRTADDDVEESV 953
F+ HA+IKCN+K+EF+VR+I EIK+ D + L+ILLQL SSP V+YRTADDD+EESV
Sbjct: 181 FRGEARHAIIKCNFKIEFMVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEESV 240
Query: 954 PFDLLDDDDPWIRTTDFTLCGAIGRCSTYRILIPPRHGIKLKKAMKYLLERRVPSENL-- 1127
FDLLDDDD WIRTTD T GAIGRC+TYRI I PR+G +KAM Y RVP +
Sbjct: 241 AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCN 300
Query: 1128 RKPLQIKDEPDFGTRMSYPFFCIQFKEGISFKILFLVNAVMHKGIFNQYQLSKEFFNLLR 1307
RK L++KDEPDFG MS PFFC Q EGISFK++FLVNAV+HKGI NQ+Q++ EFF LLR
Sbjct: 301 RKMLRVKDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359
Query: 1308 SQPEEVNVAALKHICASKRPDFNAYERMRRVQGWLMKNPKLLERTRELDDIVEVRRLVIT 1487
S+ EEVN AALKH+ + K P +A +++ +Q WL+KNPKLL+RT ELDDIVEVRRLVIT
Sbjct: 360 SRQEEVNSAALKHMFSYKWPVNDAIQKLVGIQKWLLKNPKLLDRTGELDDIVEVRRLVIT 419
Query: 1488 PTKAYCLPPEVELSNRVLRNYRSVADRFLRVTFMDEGMQTLNKNVMTYYPAPIVRDITSN 1667
PTKAYCLPP VELSNRVLRNY+ VADRFLRVTFMDEGM+ LN+NV+TYY A IVR+ITSN
Sbjct: 420 PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479
Query: 1668 SNAQKTTVFRRVKNILSEGFVLCGRKYSFLAFSANQLRDRSAWFFAEEKNTCVPDILKWM 1847
SN Q+T +F+RVK+ILS+GF LCGRKYSFLAFSANQLRDRSAWFFAE+ VP I+ WM
Sbjct: 480 SNPQRTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539
Query: 1848 GRFSEKNVAKCAARMGQCFSSTYATVEVPHSEVDSELPDIVRNGYVFSDGIGMISDDLAM 2027
GRFS +NVAKCAARMGQCFSSTYATVEVP EV+SELPDI RNGYVFSDGIGMIS DLA+
Sbjct: 540 GRFSNRNVAKCAARMGQCFSSTYATVEVPSREVNSELPDIERNGYVFSDGIGMISADLAI 599
Query: 2028 EVAERLHLKVNPPCAYQIRYAGCKGVVACWPACKDGIRLSLRLSMNKFVSKHTILEICSW 2207
EVAE+LHL VNPP AYQIRYAGCKGVVACWP DGIRLSLR SM KF S HTILEICSW
Sbjct: 600 EVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILEICSW 659
Query: 2208 TRFQPGFLNRQIITLLSALNVCDDIFWEMQESMVYKLNQMLVNADTAFDVLTASCAEEGN 2387
TRFQPGFLNRQI+TLLS+L+V D IFWEMQ+ M+ L++MLV++D AFDV+TASCAE GN
Sbjct: 660 TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCAEAGN 719
Query: 2388 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQFGDLREKARIFVPSGRWLMGCLDELGILEQG 2567
TAAIMLSAGFKPQ+EPHLRGML+SIRA+Q GDLR KARIFVPSGRWLMGCLDELG LEQG
Sbjct: 720 TAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779
Query: 2568 QCFIQLSNPSLENCFAKHGFKFSETKKDIEVIKGYVVVAKNPCLHPGDVRILEAVDVPSL 2747
QCFIQ+S+PSLENCF KHG KFS+ K++++V+KG VV+AKNPCLHPGDVRILEAVDVPSL
Sbjct: 780 QCFIQVSSPSLENCFVKHGPKFSDIKQNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSL 839
Query: 2748 HHLFDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWLPMDYAPPEVRKL 2927
HL+DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDENLIPPSKKSW+PM+Y P EV++L
Sbjct: 840 SHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQL 899
Query: 2928 PRGVQHKDIIEFFTRNMVNENLGTICNAHVVHADSSEYGALDENCIKLAELAATAVDFPK 3107
R V H DII+FF++NMV E+LG ICNAHVVHAD SE+GALDE C+KLAELAA AVDFPK
Sbjct: 900 GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959
Query: 3108 TGKIVNMPSELKPKLYPDFMGKEEFQSYKSNKILGKLYRQITDNYYIDETASPEIKFVPK 3287
TGK+V MP +LKPK+YPDFMGKEEFQSYKS KILGKLYRQ+ D + S ++ VPK
Sbjct: 960 TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPK 1019
Query: 3288 EIPYDTDLEIPGSRTFVDEAWALKCSYDEQLNGLLGQYKVNREEEVVTGHIWSMPKNSSK 3467
+IPYD+ LEI GS F+D+AW KCSYD QL+GLLGQYKVNREEEVVTGHIWSMPK S+K
Sbjct: 1020 DIPYDSTLEILGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079
Query: 3468 KQGEMKERLKNAYNALKKEFRKVFEHMDPKFDELSDDEKNSTFESRASAWYQVTYHPEWV 3647
KQGE+KERLK+AYN L+KEFR VFE MDP FD L DDEKN +E +ASAWYQVTYHP WV
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYHPHWV 1139
Query: 3648 KKSLQLQDPDGGTETVMLSFPWIAVDYLARIKIKHGGMKDVQHAKPINSLVRYLADKI 3821
+SL+LQ PD + TVMLSF WIA DYLARIKI+H ++ KPINSL RYL D I
Sbjct: 1140 ARSLELQLPDAVSNTVMLSFAWIAADYLARIKIRHRRLQYSDSTKPINSLGRYLVDNI 1197
>AAU21242.1 putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
Length = 1197
Score = 1781 bits (4612), Expect = 0.0
Identities = 872/1198 (72%), Positives = 996/1198 (83%), Gaps = 2/1198 (0%)
Frame = +3
Query: 234 MGSEGSETDTIVTQISVGGFYNYITAKRLSEYFEDNIGGVWRCRLKTSSTPPESFPDFEI 413
MGSEGSE D +VTQISVGGF N + AK LSEY E+ +G VWRCRLK S+TPP+S+P +++
Sbjct: 1 MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVGQVWRCRLKISATPPDSYPTYDV 60
Query: 414 NTENIQRTNTYEKVEPHAFVHFVLPDSARAAHNAAGHVELILEKNPLKVSLGPENPHRMN 593
+ + R YEKV PHAFVHF +SA+ A AAG LIL K PL VSLGPENP+R+N
Sbjct: 61 DAARVHRMKDYEKVVPHAFVHFASSESAKYALAAAGGNGLILGKKPLIVSLGPENPYRLN 120
Query: 594 QRRRTKAPFKLSDVRVEIGTWVSKDKFFVAWRGLPTGVDFLVDPFDGTCKFLFTKDTAFS 773
QRRRT PFK SDV VE+G VSKD F V WRG TGVDF VDPF+G CK LFTKDTAFS
Sbjct: 121 QRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGACKILFTKDTAFS 180
Query: 774 FKSTGNHAVIKCNYKVEFLVRDIKEIKQYTDTSHLIILLQLESSPQVYYRTADDDVEESV 953
F+ HA+IKCN+K+EF+VR+I EIK++ D + L+ILLQL SSP V+YRTADDD+EESV
Sbjct: 181 FRGEAKHAIIKCNFKIEFMVREINEIKKFKDFTSLVILLQLASSPLVFYRTADDDIEESV 240
Query: 954 PFDLLDDDDPWIRTTDFTLCGAIGRCSTYRILIPPRHGIKLKKAMKYLLERRVPSENL-- 1127
FDLLDDDD WIRTTD T GAIGRC+TYRI I PR+G +KAM Y RVP +
Sbjct: 241 AFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEMCN 300
Query: 1128 RKPLQIKDEPDFGTRMSYPFFCIQFKEGISFKILFLVNAVMHKGIFNQYQLSKEFFNLLR 1307
RK L+++DEPDFG MS PFFC Q EGISFK++FLVNAV+HKGI NQ+Q++ EFF LLR
Sbjct: 301 RKMLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLLR 359
Query: 1308 SQPEEVNVAALKHICASKRPDFNAYERMRRVQGWLMKNPKLLERTRELDDIVEVRRLVIT 1487
S EEVN+AALKH+ + K P +A +++ +Q WL+KNPKLLERT ELDDIVEVRRLVIT
Sbjct: 360 SHQEEVNLAALKHMFSYKWPVNDAIQKLVGIQKWLLKNPKLLERTGELDDIVEVRRLVIT 419
Query: 1488 PTKAYCLPPEVELSNRVLRNYRSVADRFLRVTFMDEGMQTLNKNVMTYYPAPIVRDITSN 1667
PTKAYCLPP VELSNRVLRNY+ VADRFLRVTFMDEGM+ LN+NV+TYY A IVR+ITSN
Sbjct: 420 PTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITSN 479
Query: 1668 SNAQKTTVFRRVKNILSEGFVLCGRKYSFLAFSANQLRDRSAWFFAEEKNTCVPDILKWM 1847
SN Q+T +F+RVK+ILS GF LCGRKYSFLAFSANQLRDRSAWFFAE+ VP I+ WM
Sbjct: 480 SNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDPKIRVPGIISWM 539
Query: 1848 GRFSEKNVAKCAARMGQCFSSTYATVEVPHSEVDSELPDIVRNGYVFSDGIGMISDDLAM 2027
GRFS +NVAKCAARMGQCFSSTYATVEVP SEV+SELPDI RNGYVFSDGIGMIS DLA+
Sbjct: 540 GRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISADLAL 599
Query: 2028 EVAERLHLKVNPPCAYQIRYAGCKGVVACWPACKDGIRLSLRLSMNKFVSKHTILEICSW 2207
EVAE+LHL VNPP AYQIRYAGCKGVVACWP DGI LSLR SM KF S HTILEICSW
Sbjct: 600 EVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGILLSLRPSMKKFDSNHTILEICSW 659
Query: 2208 TRFQPGFLNRQIITLLSALNVCDDIFWEMQESMVYKLNQMLVNADTAFDVLTASCAEEGN 2387
TRFQPGFLNRQI+TLLS+L+V D IFWEMQ+ M+ LN+MLV++D AFDV+TASCAE GN
Sbjct: 660 TRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLNKMLVDSDVAFDVITASCAEAGN 719
Query: 2388 TAAIMLSAGFKPQTEPHLRGMLTSIRAAQFGDLREKARIFVPSGRWLMGCLDELGILEQG 2567
TAAIMLSAGFKPQ+EPHLRGML+SIRA+Q GDLR KARIFVPSGRWLMGCLDELG LEQG
Sbjct: 720 TAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGELEQG 779
Query: 2568 QCFIQLSNPSLENCFAKHGFKFSETKKDIEVIKGYVVVAKNPCLHPGDVRILEAVDVPSL 2747
QCFIQ+S+PSLENCF KHG KFS+ KK+++V+KG VV+AKNPCLHPGDVRILEAVDVP L
Sbjct: 780 QCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGL 839
Query: 2748 HHLFDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWLPMDYAPPEVRKL 2927
HHL+DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDENLIPPSKKSW+PM+Y P EV++L
Sbjct: 840 HHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQL 899
Query: 2928 PRGVQHKDIIEFFTRNMVNENLGTICNAHVVHADSSEYGALDENCIKLAELAATAVDFPK 3107
R V H DII+FF++NMV E+LG ICNAHVVHAD SE+GALDE C+KLAELAA AVDFPK
Sbjct: 900 GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959
Query: 3108 TGKIVNMPSELKPKLYPDFMGKEEFQSYKSNKILGKLYRQITDNYYIDETASPEIKFVPK 3287
TGK+V MP +LKPK+YPDFMGKEEFQSYKS KILGKLYRQ+ D + S ++ VP
Sbjct: 960 TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPN 1019
Query: 3288 EIPYDTDLEIPGSRTFVDEAWALKCSYDEQLNGLLGQYKVNREEEVVTGHIWSMPKNSSK 3467
+IPYD+ LEIPGS F+ +AW KCSYD QL+GLLGQYKVNREEEVVTGHIWSMPK S+K
Sbjct: 1020 DIPYDSSLEIPGSTVFMGDAWNCKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079
Query: 3468 KQGEMKERLKNAYNALKKEFRKVFEHMDPKFDELSDDEKNSTFESRASAWYQVTYHPEWV 3647
KQGE+KERLK+AYN L+KEFR VFE MDP FD L DDEKN +E +ASAWYQVTY+P WV
Sbjct: 1080 KQGELKERLKHAYNMLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWV 1139
Query: 3648 KKSLQLQDPDGGTETVMLSFPWIAVDYLARIKIKHGGMKDVQHAKPINSLVRYLADKI 3821
+SL+LQ PD + TVMLSF WIA DYLARI I+H G++ KPINSL RYL D I
Sbjct: 1140 ARSLELQLPDAVSSTVMLSFAWIAADYLARINIRHRGLQYSDSTKPINSLGRYLVDNI 1197
>XP_011039698.1 PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
Length = 1195
Score = 1779 bits (4608), Expect = 0.0
Identities = 862/1198 (71%), Positives = 999/1198 (83%), Gaps = 2/1198 (0%)
Frame = +3
Query: 234 MGSEGSETDTIVTQISVGGFYNYITAKRLSEYFEDNIGGVWRCRLKTSSTPPESFPDFEI 413
M +EGS +T+VTQ+S+GGF ++TAK L EY E IG VWRCRLKTS TPPES+P+FEI
Sbjct: 1 METEGSAKETVVTQVSIGGFDIHVTAKDLLEYLEREIGLVWRCRLKTSWTPPESYPNFEI 60
Query: 414 -NTENIQRTNTYEKVEPHAFVHFVLPDSARAAHNAAGHVELILEKNPLKVSLGPENPHRM 590
+ I RT Y +VEPHAFVHF LP+SA A +AA EL L LK SLGPENP +
Sbjct: 61 ADLTKITRTEDYRRVEPHAFVHFALPESATWAIDAADRCELFLNNKGLKASLGPENPFTL 120
Query: 591 NQRRRTKAPFKLSDVRVEIGTWVSKDKFFVAWRGLPTGVDFLVDPFDGTCKFLFTKDTAF 770
NQRRR PFKLSDV VEIGT VS+D+FFV WRG PTGVDFLVDPFDGTC+F F+++TAF
Sbjct: 121 NQRRRKTTPFKLSDVDVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRNTAF 180
Query: 771 SFKSTGNHAVIKCNYKVEFLVRDIKEIKQYTDTSHLIILLQLESSPQVYYRTADDDVEES 950
SFKST HAVIKC++KVEFLVRDI EIKQY +TS L++LLQL S+P V+YRTADDD+E S
Sbjct: 181 SFKSTAEHAVIKCDFKVEFLVRDINEIKQYKETSCLVLLLQLASAPWVWYRTADDDIEVS 240
Query: 951 VPFDLLDDDDPWIRTTDFTLCGAIGRCSTYRILIPPRHGIKLKKAMKYLLERRVPSENLR 1130
VPFDLLDDDDPWIRTTDFT GAIGRC +YR+ IPPRHG KL+KA+ +L ERRV E LR
Sbjct: 241 VPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEEYLR 300
Query: 1131 KPLQIKDEPDFGTRMSYPFFCIQFKEGISFKILFLVNAVMHKGIFNQYQLSKEFFNLLRS 1310
+P++I+DEPDFG M+ PFFCI KEGI+F +LFLVNAVMHKGIFNQ+QLS +FF+LLR+
Sbjct: 301 RPIRIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLRN 360
Query: 1311 QPEEVNVAALKHICASKRPDFNAYERMRRVQGWLMKNPKLLERTRELDDIVEVRRLVITP 1490
QP EVNVAALKHI +RP F+AY++++ Q WL+KNPKL + ++LDDI E+RRL+ITP
Sbjct: 361 QPTEVNVAALKHIYPYRRPVFDAYKKLKVTQEWLLKNPKLFKNQKKLDDIAEIRRLIITP 420
Query: 1491 TKAYCLPPEVELSNRVLRNYRSVADRFLRVTFMDEGMQTLNKNVMTYYPAPIVRDITSNS 1670
TKAYCLPPEVELSNRVLR Y+ VADRFLRVTFMDEG+QT+N N + Y+ APIVR ITS S
Sbjct: 421 TKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGVQTMNSNALNYFAAPIVRAITSYS 480
Query: 1671 NAQKTTVFRRVKNILSEGFVLCGRKYSFLAFSANQLRDRSAWFFAEEKNTCVPDILKWMG 1850
QKT +F+RV++IL+EGF LCGR+YSFLAFS+NQLRDRSAWFFAE++N V I WMG
Sbjct: 481 FPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNINVMAIKSWMG 540
Query: 1851 RFSEKNVAKCAARMGQCFSSTYATVEVPHSEVDSELPDIVRNGYVFSDGIGMISDDLAME 2030
+F+ KN+AKCAARMGQCFSSTYAT+EVP EV+S+LPDI RNGY FSDGIGMI+ DLA E
Sbjct: 541 KFTNKNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITPDLARE 600
Query: 2031 VAERLHLKVNPPCAYQIRYAGCKGVVACWPACKDGIRLSLRLSMNKFVSKHTILEICSWT 2210
VAE+L +PP AYQIRYAGCKGVVACWP DGIRLSLR SMNKF S HTILEICSWT
Sbjct: 601 VAEKLKFDFDPPSAYQIRYAGCKGVVACWPEQGDGIRLSLRSSMNKFQSNHTILEICSWT 660
Query: 2211 RFQPGFLNRQIITLLSALNVCDDIFWEMQESMVYKLNQMLVNADTAFDVLTASCAEEGNT 2390
RFQPGFLNRQIITLLSALNV D +FW+MQE MV KLNQMLV++D AFDVLTASCAE GN
Sbjct: 661 RFQPGFLNRQIITLLSALNVPDAVFWKMQEIMVSKLNQMLVDSDVAFDVLTASCAELGNV 720
Query: 2391 AAIMLSAGFKPQTEPHLRGMLTSIRAAQFGDLREKARIFVPSGRWLMGCLDELGILEQGQ 2570
AAIMLSAGFKPQ EPHLRGML +RAAQ LREKARIFVPSGRWLMGCLDEL +LEQGQ
Sbjct: 721 AAIMLSAGFKPQKEPHLRGMLNCVRAAQLWGLREKARIFVPSGRWLMGCLDELAVLEQGQ 780
Query: 2571 CFIQLSNPSLENCFAKHGFKFSETKKDIEVIKGYVVVAKNPCLHPGDVRILEAVDVPSLH 2750
CFIQ+SN LENCF KHG KFSETK++++V+KG VV+AKNPCLHPGD+RILEAVD P LH
Sbjct: 781 CFIQVSNSYLENCFVKHGSKFSETKRNLQVVKGTVVIAKNPCLHPGDIRILEAVDDPGLH 840
Query: 2751 HLFDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWLPMDYAPPEVRKLP 2930
HL+DCLVFPQKG+RPH NEASGSDLDGDLYFVTWDENLIPPSK+SW+PM Y E ++L
Sbjct: 841 HLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKQLT 900
Query: 2931 RGVQHKDIIEFFTRNMVNENLGTICNAHVVHADSSEYGALDENCIKLAELAATAVDFPKT 3110
R V H+DIIEFF +NM NENLG ICNAHVV AD SEYGALDE C+ LAELAATAVDFPKT
Sbjct: 901 RPVNHQDIIEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAVDFPKT 960
Query: 3111 GKIVNMPSELKPKLYPDFMGKEEFQSYKSNKILGKLYRQITDNYYIDE-TASPEIKFVPK 3287
GKIV+MPS+LKPK+YPDFMGKEE QSYKS KILG+LYRQI D Y D+ AS ++ FVP
Sbjct: 961 GKIVSMPSDLKPKIYPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAASSDLNFVPG 1020
Query: 3288 EIPYDTDLEIPGSRTFVDEAWALKCSYDEQLNGLLGQYKVNREEEVVTGHIWSMPKNSSK 3467
++PYD DLE+ G+ ++ +AW KCSYD QLNGLL QYKV REEEVVTGH+WSMPK SS+
Sbjct: 1021 DVPYDLDLEVLGATDYISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVWSMPKGSSR 1080
Query: 3468 KQGEMKERLKNAYNALKKEFRKVFEHMDPKFDELSDDEKNSTFESRASAWYQVTYHPEWV 3647
+QG++KERLK++YN LK+EFR+VFE MD F +L DDEKN +E +ASAWYQVTYHP W+
Sbjct: 1081 QQGDLKERLKHSYNCLKREFRQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVTYHPRWI 1140
Query: 3648 KKSLQLQDPDGGTETVMLSFPWIAVDYLARIKIKHGGMKDVQHAKPINSLVRYLADKI 3821
+KSL+LQD DG MLSF WIA DYLARIKI+H + +V AKPINSL +YLAD++
Sbjct: 1141 QKSLELQDSDG---AAMLSFAWIAADYLARIKIRHSRIGNVDSAKPINSLAKYLADRM 1195
>XP_008219491.1 PREDICTED: RNA-dependent RNA polymerase 6 [Prunus mume]
Length = 1196
Score = 1778 bits (4606), Expect = 0.0
Identities = 857/1197 (71%), Positives = 1004/1197 (83%), Gaps = 1/1197 (0%)
Frame = +3
Query: 234 MGSEGSETDTIVTQISVGGFYNYITAKRLSEYFEDNIGGVWRCRLKTSSTPPESFPDFEI 413
M EGSE ++VTQ+S GGF +++ AK L Y ED IG V+RCRLKTS TPPESFP+FEI
Sbjct: 1 MEFEGSENGSVVTQVSFGGFQHHVRAKDLVTYLEDEIGVVYRCRLKTSWTPPESFPNFEI 60
Query: 414 NTENIQRTNTYEKVEPHAFVHFVLPDSARAAHNAAGHVELILEKNPLKVSLGPENPHRMN 593
NT +++RT+ Y +VEPHAFVHFV PDS A +AAG EL L PLKVS+G ENP+ +N
Sbjct: 61 NTADVKRTDDYSRVEPHAFVHFVSPDSVTFAMDAAGRCELFLNNEPLKVSMGLENPYFLN 120
Query: 594 QRRRTKAPFKLSDVRVEIGTWVSKDKFFVAWRGLPTGVDFLVDPFDGTCKFLFTKDTAFS 773
+RRRTK PFKLSDV VEIG+ V +D+FFV+WRG P GVDF+VDPFDGTCKF FT DTAFS
Sbjct: 121 RRRRTKTPFKLSDVHVEIGSLVRQDEFFVSWRGPPYGVDFIVDPFDGTCKFCFTMDTAFS 180
Query: 774 FKSTGNHAVIKCNYKVEFLVRDIKEIKQYTDTSHLIILLQLESSPQVYYRTADDDVEESV 953
FK T HAVIKC++KVEFLVR+I EIKQYTDTS+L+ILL+L SSP V YRTADDD+++SV
Sbjct: 181 FKGTKKHAVIKCDFKVEFLVREIAEIKQYTDTSYLVILLRLTSSPWVSYRTADDDIDQSV 240
Query: 954 PFDLLDDDDPWIRTTDFTLCGAIGRCSTYRILIPPRHGIKLKKAMKYLLERRVPSENLRK 1133
PFDLLDDDDPWIRTTDFT GAIGRC++YR+LIPPRHG KLKKAM YL ERRV ++
Sbjct: 241 PFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVLIPPRHGAKLKKAMNYLRERRVKEVCIKW 300
Query: 1134 PLQIKDEPDFGTRMSYPFFCIQFKEGISFKILFLVNAVMHKGIFNQYQLSKEFFNLLRSQ 1313
P +I+DEPDFG + PFF IQ++E ISF+I+FLVNAVMHKG NQ+QLS FF+LLRSQ
Sbjct: 301 PPRIQDEPDFGMSNTEPFFSIQYEEDISFEIMFLVNAVMHKGTVNQHQLSDSFFHLLRSQ 360
Query: 1314 PEEVNVAALKHICASKRPDFNAYERMRRVQGWLMKNPKLLERTRELDDIVEVRRLVITPT 1493
P+E+NVAALKH+C+ + P F+A ER++ VQ WL+KNPKL++ + LDDIVEVRRLVITPT
Sbjct: 361 PKEINVAALKHLCSYRNPVFDACERLKVVQDWLLKNPKLVKDPKRLDDIVEVRRLVITPT 420
Query: 1494 KAYCLPPEVELSNRVLRNYRSVADRFLRVTFMDEGMQTLNKNVMTYYPAPIVRDITSNSN 1673
KAYCLPPEVELSNRVLR Y+ VADRFLRVTFMDEGMQ +N NV+ YY APIV++ITSNS
Sbjct: 421 KAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQKINSNVLNYYVAPIVKEITSNSF 480
Query: 1674 AQKTTVFRRVKNILSEGFVLCGRKYSFLAFSANQLRDRSAWFFAEEKNTCVPDILKWMGR 1853
QKT VF+R +NIL++GF LCGRKY+FLAFS+NQLRDRSAWFFAE N V I WMG+
Sbjct: 481 LQKTNVFKRFRNILNDGFYLCGRKYTFLAFSSNQLRDRSAWFFAECVNISVGKITSWMGK 540
Query: 1854 FSEKNVAKCAARMGQCFSSTYATVEVPHSEVDSELPDIVRNGYVFSDGIGMISDDLAMEV 2033
F+ KNVAKCAARMGQCFSSTYATVEVP SEV+ ++PDI RNGY+FSDGIGMI+ DLA+EV
Sbjct: 541 FNNKNVAKCAARMGQCFSSTYATVEVPSSEVN-DIPDIERNGYIFSDGIGMITPDLALEV 599
Query: 2034 AERLHLKVNPPCAYQIRYAGCKGVVACWPACKDGIRLSLRLSMNKFVSKHTILEICSWTR 2213
AE+L L NPPCAYQIR+AGCKGVVACWP+ D RLSLR SMNKF SKH LEICSWTR
Sbjct: 600 AEKLKLDRNPPCAYQIRFAGCKGVVACWPSKGDRFRLSLRTSMNKFESKHATLEICSWTR 659
Query: 2214 FQPGFLNRQIITLLSALNVCDDIFWEMQESMVYKLNQMLVNADTAFDVLTASCAEEGNTA 2393
+QPGFLNRQIITLLS L V D+IFW MQE MV KLNQMLV+ D AFDVLT+SCAE+GN A
Sbjct: 660 YQPGFLNRQIITLLSTLKVEDEIFWRMQEKMVLKLNQMLVDTDVAFDVLTSSCAEQGNAA 719
Query: 2394 AIMLSAGFKPQTEPHLRGMLTSIRAAQFGDLREKARIFVPSGRWLMGCLDELGILEQGQC 2573
AIMLSAGFKPQTEPHLRGMLT I+AAQ LREKARIFV SGRWLMG LDELG+LEQGQC
Sbjct: 720 AIMLSAGFKPQTEPHLRGMLTCIQAAQLWGLREKARIFVHSGRWLMGVLDELGVLEQGQC 779
Query: 2574 FIQLSNPSLENCFAKHGFKFSETKKDIEVIKGYVVVAKNPCLHPGDVRILEAVDVPSLHH 2753
F+Q+S PSLE+CFAKHG F++ +++++VIKGYVV+AKNPCLHPGD+RILEAVD P LHH
Sbjct: 780 FVQVSTPSLESCFAKHGSSFAQIERNLQVIKGYVVIAKNPCLHPGDIRILEAVDAPGLHH 839
Query: 2754 LFDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWLPMDYAPPEVRKLPR 2933
L+DCLVFPQKGDRPHT+EASGSDLDGDLYFVTWDENLIPPSKKSW+PM Y P E ++ R
Sbjct: 840 LYDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLIPPSKKSWMPMQYDPAEAKRQGR 899
Query: 2934 GVQHKDIIEFFTRNMVNENLGTICNAHVVHADSSEYGALDENCIKLAELAATAVDFPKTG 3113
V +DII+FF +NM NENLG ICNAHVVHAD S+YGALDENC+KLAELAA AVDFPKTG
Sbjct: 900 PVTQQDIIDFFVKNMTNENLGPICNAHVVHADRSDYGALDENCLKLAELAALAVDFPKTG 959
Query: 3114 KIVNMPSELKPKLYPDFMGKEEFQSYKSNKILGKLYRQITDNYYIDETASPEIKFVPKEI 3293
KIV +P LKP+LYPDF+GKE+ QSYKS KILG+LYR++ D Y D + E+ +VP +I
Sbjct: 960 KIVTLPQHLKPRLYPDFLGKEDNQSYKSTKILGRLYRKVRDAYDEDAATTSELHYVPSDI 1019
Query: 3294 PYDTDLEIPGSRTFVDEAWALKCSYDEQLNGLLGQYKVNREEEVVTGHIWSMPKNSSKKQ 3473
PYD DLE+PG+ F+ +AW KCSYD QL GL+GQYKV REEE+VTGH+WS+PK++SKKQ
Sbjct: 1020 PYDMDLEVPGAADFIFDAWEKKCSYDGQLKGLMGQYKVKREEEIVTGHVWSIPKSNSKKQ 1079
Query: 3474 GEMKERLKNAYNALKKEFRKVFEHMDPKFDELSDDEKNSTFESRASAWYQVTYHPEWVKK 3653
GE+KERL ++YNALKKEFR++FE++D + L+DDEKN E +ASAWYQVTYHP+WVK+
Sbjct: 1080 GELKERLSHSYNALKKEFRQMFENLDSNLEALTDDEKNILCEKKASAWYQVTYHPKWVKQ 1139
Query: 3654 SLQLQDPDG-GTETVMLSFPWIAVDYLARIKIKHGGMKDVQHAKPINSLVRYLADKI 3821
S LQ+PDG G VMLSF WIA DYLARIKIK G++ + KPINSL RYLAD+I
Sbjct: 1140 SPPLQEPDGPGDVVVMLSFAWIAADYLARIKIKCRGVEHIDSTKPINSLKRYLADRI 1196