BLASTX nr result
ID: Panax24_contig00002358
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00002358
(359 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
APY22346.1 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase... 106 2e-24
AFQ98370.1 hydroxymethylbutenyl diphosphate synthase [Camellia s... 104 9e-24
XP_016465300.1 PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphos... 90 4e-21
XP_016474629.1 PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphos... 93 1e-19
XP_018623938.1 PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphos... 93 1e-19
XP_019255437.1 PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphos... 92 3e-19
CDP07116.1 unnamed protein product [Coffea canephora] 91 9e-19
XP_010098198.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synth... 90 1e-18
XP_017247699.1 PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphos... 89 2e-18
XP_010253662.1 PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphos... 89 2e-18
AOV62778.1 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Mo... 89 4e-18
ALD62476.1 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Mo... 89 4e-18
AAO24774.1 GCPE protein [Catharanthus roseus] 88 6e-18
AOX49856.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase ... 88 8e-18
XP_015058287.1 PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphos... 88 8e-18
NP_001234648.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synth... 86 4e-17
XP_009367086.1 PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphos... 86 4e-17
NP_001289212.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synth... 86 4e-17
XP_015874406.1 PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphos... 86 5e-17
XP_011089897.1 PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphos... 85 7e-17
>APY22346.1 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase, partial
[Hedera helix]
Length = 740
Score = 106 bits (265), Expect = 2e-24
Identities = 53/59 (89%), Positives = 56/59 (94%)
Frame = -3
Query: 177 MATGAVPTSFTGLKSKDHGVGFTKSMDFIKVTDLQRVKFRRTKVSTIRNSNSGSEIAEL 1
MATGAVPTS TGLKSKDHG+GFTKS+DFIKV+DLQRVKFRRTKVS IRNSN GSEIAEL
Sbjct: 1 MATGAVPTSVTGLKSKDHGLGFTKSVDFIKVSDLQRVKFRRTKVSVIRNSNPGSEIAEL 59
>AFQ98370.1 hydroxymethylbutenyl diphosphate synthase [Camellia sinensis]
Length = 741
Score = 104 bits (260), Expect = 9e-24
Identities = 51/59 (86%), Positives = 54/59 (91%)
Frame = -3
Query: 177 MATGAVPTSFTGLKSKDHGVGFTKSMDFIKVTDLQRVKFRRTKVSTIRNSNSGSEIAEL 1
MATGAVP SFTGLKS+DHG+GF KSMDF+KV DLQRVKFRRTKVS IRNSN GSEIAEL
Sbjct: 1 MATGAVPASFTGLKSRDHGLGFVKSMDFVKVCDLQRVKFRRTKVSVIRNSNPGSEIAEL 59
>XP_016465300.1 PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(ferredoxin), chloroplastic-like [Nicotiana tabacum]
Length = 107
Score = 90.1 bits (222), Expect = 4e-21
Identities = 43/59 (72%), Positives = 50/59 (84%)
Frame = -3
Query: 177 MATGAVPTSFTGLKSKDHGVGFTKSMDFIKVTDLQRVKFRRTKVSTIRNSNSGSEIAEL 1
MA GAVP SFTGLKS+++GVGF KSMDF++V+DLQRV FRRTKVS IRN+N G E EL
Sbjct: 1 MAAGAVPASFTGLKSRENGVGFAKSMDFVRVSDLQRVMFRRTKVSVIRNANPGPETIEL 59
>XP_016474629.1 PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(ferredoxin), chloroplastic [Nicotiana tabacum]
XP_016474630.1 PREDICTED:
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(ferredoxin), chloroplastic [Nicotiana tabacum]
Length = 740
Score = 93.2 bits (230), Expect = 1e-19
Identities = 44/59 (74%), Positives = 52/59 (88%)
Frame = -3
Query: 177 MATGAVPTSFTGLKSKDHGVGFTKSMDFIKVTDLQRVKFRRTKVSTIRNSNSGSEIAEL 1
MA GAVPTSFTGLKS+++GVGF KS+DF++V+DLQRVKFRRTKVS IRN+N G E EL
Sbjct: 1 MAAGAVPTSFTGLKSRENGVGFAKSLDFVRVSDLQRVKFRRTKVSVIRNANPGPETIEL 59
>XP_018623938.1 PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(ferredoxin), chloroplastic [Nicotiana tomentosiformis]
XP_018623939.1 PREDICTED:
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(ferredoxin), chloroplastic [Nicotiana tomentosiformis]
Length = 740
Score = 93.2 bits (230), Expect = 1e-19
Identities = 44/59 (74%), Positives = 52/59 (88%)
Frame = -3
Query: 177 MATGAVPTSFTGLKSKDHGVGFTKSMDFIKVTDLQRVKFRRTKVSTIRNSNSGSEIAEL 1
MA GAVPTSFTGLKS+++GVGF KS+DF++V+DLQRVKFRRTKVS IRN+N G E EL
Sbjct: 1 MAAGAVPTSFTGLKSRENGVGFAKSLDFVRVSDLQRVKFRRTKVSVIRNANPGPETIEL 59
>XP_019255437.1 PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(ferredoxin), chloroplastic [Nicotiana attenuata]
XP_019255438.1 PREDICTED:
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(ferredoxin), chloroplastic [Nicotiana attenuata]
OIS96595.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase (ferredoxin), chloroplastic [Nicotiana
attenuata]
Length = 740
Score = 91.7 bits (226), Expect = 3e-19
Identities = 43/59 (72%), Positives = 51/59 (86%)
Frame = -3
Query: 177 MATGAVPTSFTGLKSKDHGVGFTKSMDFIKVTDLQRVKFRRTKVSTIRNSNSGSEIAEL 1
MA GAVP SFTGLKS+++GVGF KSMDF++V+D+QRVKFRRTKVS IRN+N G E EL
Sbjct: 1 MAAGAVPASFTGLKSRENGVGFAKSMDFVRVSDIQRVKFRRTKVSVIRNANPGPETIEL 59
>CDP07116.1 unnamed protein product [Coffea canephora]
Length = 731
Score = 90.5 bits (223), Expect = 9e-19
Identities = 42/59 (71%), Positives = 52/59 (88%)
Frame = -3
Query: 177 MATGAVPTSFTGLKSKDHGVGFTKSMDFIKVTDLQRVKFRRTKVSTIRNSNSGSEIAEL 1
MATGAVP SFTGLKS+++G+GF KSM+F++V++ QRVKFRRTKVS I+NSN G EI EL
Sbjct: 1 MATGAVPASFTGLKSRENGLGFAKSMEFVRVSNTQRVKFRRTKVSVIKNSNPGQEIVEL 59
>XP_010098198.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Morus
notabilis] EXB74654.1 4-hydroxy-3-methylbut-2-en-1-yl
diphosphate synthase [Morus notabilis]
Length = 978
Score = 90.1 bits (222), Expect = 1e-18
Identities = 42/65 (64%), Positives = 54/65 (83%)
Frame = -3
Query: 195 IFCVVKMATGAVPTSFTGLKSKDHGVGFTKSMDFIKVTDLQRVKFRRTKVSTIRNSNSGS 16
+ V +MA G VP +F+GLKS+D G+GF KS+DF+KV+DL+RVKF RT+VS IRNSN GS
Sbjct: 233 VSAVKEMAAGTVPAAFSGLKSRDSGLGFAKSLDFVKVSDLKRVKFARTRVSVIRNSNPGS 292
Query: 15 EIAEL 1
+IAEL
Sbjct: 293 DIAEL 297
>XP_017247699.1 PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(ferredoxin), chloroplastic-like [Daucus carota subsp.
sativus] XP_017247700.1 PREDICTED:
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(ferredoxin), chloroplastic-like [Daucus carota subsp.
sativus] XP_017247701.1 PREDICTED:
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(ferredoxin), chloroplastic-like [Daucus carota subsp.
sativus] KZM97101.1 4-hydroxy-3-methylbut-2-en-1-yl
diphosphate synthase [Daucus carota subsp. sativus]
Length = 740
Score = 89.4 bits (220), Expect = 2e-18
Identities = 41/59 (69%), Positives = 53/59 (89%)
Frame = -3
Query: 177 MATGAVPTSFTGLKSKDHGVGFTKSMDFIKVTDLQRVKFRRTKVSTIRNSNSGSEIAEL 1
MATGAVPT+FT +KSK HG+GFT++++F+KV+++ RVKFRRT VS IRNS+SGSEI EL
Sbjct: 1 MATGAVPTTFTSVKSKGHGLGFTRNVEFVKVSEMDRVKFRRTMVSLIRNSSSGSEIVEL 59
>XP_010253662.1 PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(ferredoxin), chloroplastic [Nelumbo nucifera]
XP_010253663.1 PREDICTED:
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(ferredoxin), chloroplastic [Nelumbo nucifera]
Length = 740
Score = 89.4 bits (220), Expect = 2e-18
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = -3
Query: 177 MATGAVPTSFTGLKSKDHGVGFTKSMDFIKVTDLQRVKFRRTKVSTIRNSNSGSEIAEL 1
MATG+VP SF+G K +D+G+ FTKS+DF+KV+DLQRVK RR+KVSTIRNSNSGSE EL
Sbjct: 1 MATGSVPASFSGPKIRDYGLSFTKSVDFVKVSDLQRVKSRRSKVSTIRNSNSGSETVEL 59
>AOV62778.1 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Morus alba]
Length = 740
Score = 88.6 bits (218), Expect = 4e-18
Identities = 41/59 (69%), Positives = 51/59 (86%)
Frame = -3
Query: 177 MATGAVPTSFTGLKSKDHGVGFTKSMDFIKVTDLQRVKFRRTKVSTIRNSNSGSEIAEL 1
MA G VP +F+GLKS+D G+GF KS+DF+KV+DL+RVKF RT+VS IRNSN GS+IAEL
Sbjct: 1 MAAGTVPAAFSGLKSRDSGLGFAKSLDFVKVSDLKRVKFARTRVSVIRNSNPGSDIAEL 59
>ALD62476.1 4-hydroxy-3-methylbut-2-enyl diphosphate synthase [Morus alba]
Length = 740
Score = 88.6 bits (218), Expect = 4e-18
Identities = 41/59 (69%), Positives = 51/59 (86%)
Frame = -3
Query: 177 MATGAVPTSFTGLKSKDHGVGFTKSMDFIKVTDLQRVKFRRTKVSTIRNSNSGSEIAEL 1
MA G VP +F+GLKS+D G+GF KS+DF+KV+DL+RVKF RT+VS IRNSN GS+IAEL
Sbjct: 1 MAAGTVPAAFSGLKSRDSGLGFAKSLDFVKVSDLKRVKFARTRVSVIRNSNPGSDIAEL 59
>AAO24774.1 GCPE protein [Catharanthus roseus]
Length = 740
Score = 88.2 bits (217), Expect = 6e-18
Identities = 41/59 (69%), Positives = 50/59 (84%)
Frame = -3
Query: 177 MATGAVPTSFTGLKSKDHGVGFTKSMDFIKVTDLQRVKFRRTKVSTIRNSNSGSEIAEL 1
MATG VP SFTGLKS+++G+GF KSMDF++V+DL+RVKFRR KVS I+NSN G E EL
Sbjct: 1 MATGTVPASFTGLKSRENGLGFAKSMDFVQVSDLRRVKFRRAKVSVIKNSNPGPETVEL 59
>AOX49856.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Ilex
paraguariensis]
Length = 740
Score = 87.8 bits (216), Expect = 8e-18
Identities = 42/59 (71%), Positives = 49/59 (83%)
Frame = -3
Query: 177 MATGAVPTSFTGLKSKDHGVGFTKSMDFIKVTDLQRVKFRRTKVSTIRNSNSGSEIAEL 1
MATGAVP SF GLKS++H +GF KS+ F++V+ LQRVKFRRTKVS IRNSN GSE EL
Sbjct: 1 MATGAVPASFMGLKSREHDLGFAKSLGFVRVSGLQRVKFRRTKVSVIRNSNPGSETVEL 59
>XP_015058287.1 PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(ferredoxin), chloroplastic [Solanum pennellii]
XP_015058288.1 PREDICTED:
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(ferredoxin), chloroplastic [Solanum pennellii]
Length = 740
Score = 87.8 bits (216), Expect = 8e-18
Identities = 42/59 (71%), Positives = 49/59 (83%)
Frame = -3
Query: 177 MATGAVPTSFTGLKSKDHGVGFTKSMDFIKVTDLQRVKFRRTKVSTIRNSNSGSEIAEL 1
MA G VP SFTGLKS ++G+GF KSM+FI+V+DLQRVKFRRTKVS IRN+N G E EL
Sbjct: 1 MAAGTVPASFTGLKSNENGLGFAKSMNFIRVSDLQRVKFRRTKVSVIRNANPGQETIEL 59
>NP_001234648.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase [Solanum
lycopersicum] NP_001332792.1
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
[Solanum lycopersicum] AAO15447.1 GcpE [Solanum
lycopersicum]
Length = 740
Score = 85.9 bits (211), Expect = 4e-17
Identities = 41/59 (69%), Positives = 48/59 (81%)
Frame = -3
Query: 177 MATGAVPTSFTGLKSKDHGVGFTKSMDFIKVTDLQRVKFRRTKVSTIRNSNSGSEIAEL 1
MA G VP SFTGLKS ++G+GF KSM+FI+V+DLQRVKFRRTK S IRN+N G E EL
Sbjct: 1 MAAGTVPASFTGLKSNENGLGFAKSMNFIRVSDLQRVKFRRTKFSVIRNANPGQETIEL 59
>XP_009367086.1 PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,
chloroplastic isoform X1 [Pyrus x bretschneideri]
XP_009367087.1 PREDICTED:
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,
chloroplastic isoform X1 [Pyrus x bretschneideri]
XP_009367088.1 PREDICTED:
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,
chloroplastic isoform X1 [Pyrus x bretschneideri]
Length = 740
Score = 85.9 bits (211), Expect = 4e-17
Identities = 41/59 (69%), Positives = 49/59 (83%)
Frame = -3
Query: 177 MATGAVPTSFTGLKSKDHGVGFTKSMDFIKVTDLQRVKFRRTKVSTIRNSNSGSEIAEL 1
MATGAVP SFTGLKS+D GF KSMDF++V+DL+R K RT++S IRNSN GS+IAEL
Sbjct: 1 MATGAVPASFTGLKSRDSSFGFAKSMDFVRVSDLKRFKSGRTRISVIRNSNRGSDIAEL 59
>NP_001289212.1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, chloroplastic
[Pyrus x bretschneideri] AHM26645.1
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
protein [Pyrus x bretschneideri]
Length = 740
Score = 85.9 bits (211), Expect = 4e-17
Identities = 41/59 (69%), Positives = 49/59 (83%)
Frame = -3
Query: 177 MATGAVPTSFTGLKSKDHGVGFTKSMDFIKVTDLQRVKFRRTKVSTIRNSNSGSEIAEL 1
MATGAVP SFTGLKS+D GF KSMDF++V+DL+R K RT++S IRNSN GS+IAEL
Sbjct: 1 MATGAVPASFTGLKSRDSSFGFAKSMDFVRVSDLKRFKSGRTRISVIRNSNPGSDIAEL 59
>XP_015874406.1 PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
(ferredoxin), chloroplastic [Ziziphus jujuba]
Length = 743
Score = 85.5 bits (210), Expect = 5e-17
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = -3
Query: 177 MATGAVPTSFTGLKSKDHGVGFTKSMDFIKVTDLQRVKFRRTKVSTIRNSNSGSEIAEL 1
MATGAVP SFTGLKS+D +GF KS DF+KV+DL+RV + R ++S IRNSN GS+IAEL
Sbjct: 1 MATGAVPASFTGLKSRDSSLGFAKSFDFVKVSDLKRVNYGRKRISVIRNSNPGSDIAEL 59
>XP_011089897.1 PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase,
chloroplastic [Sesamum indicum] XP_011089899.1
PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase, chloroplastic [Sesamum indicum] XP_011089900.1
PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate
synthase, chloroplastic [Sesamum indicum]
Length = 742
Score = 85.1 bits (209), Expect = 7e-17
Identities = 43/61 (70%), Positives = 51/61 (83%), Gaps = 2/61 (3%)
Frame = -3
Query: 177 MATGAVPTSFTGLKSKDH-GVGFTKSMDFIKVTDLQRVKFRRTKVSTIRNS-NSGSEIAE 4
MATGAVP SFTGLKS+DH G+ F KS DF++V+DLQRVKFRRTK++ IRNS N GS+ E
Sbjct: 1 MATGAVPASFTGLKSRDHQGISFAKSSDFVRVSDLQRVKFRRTKIAVIRNSTNPGSDTVE 60
Query: 3 L 1
L
Sbjct: 61 L 61