BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00002260
         (490 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017227798.1 PREDICTED: RNA polymerase sigma factor sigC [Dauc...    90   5e-18
XP_006450755.1 hypothetical protein CICLE_v10007968mg [Citrus cl...    73   2e-12
KDO79967.1 hypothetical protein CISIN_1g009449mg [Citrus sinensi...    73   4e-12
KDO79963.1 hypothetical protein CISIN_1g009449mg [Citrus sinensis]     73   4e-12
KDO79965.1 hypothetical protein CISIN_1g009449mg [Citrus sinensi...    73   4e-12
XP_006450757.1 hypothetical protein CICLE_v10007968mg [Citrus cl...    73   4e-12
KDO79964.1 hypothetical protein CISIN_1g009449mg [Citrus sinensis]     73   4e-12
XP_006450758.1 hypothetical protein CICLE_v10007968mg [Citrus cl...    73   4e-12
KDO79962.1 hypothetical protein CISIN_1g009449mg [Citrus sinensis]     73   5e-12
XP_006450764.1 hypothetical protein CICLE_v10007968mg [Citrus cl...    73   5e-12
KDO79961.1 hypothetical protein CISIN_1g009449mg [Citrus sinensis]     73   5e-12
KDO79960.1 hypothetical protein CISIN_1g009449mg [Citrus sinensis]     73   5e-12
XP_006475980.1 PREDICTED: RNA polymerase sigma factor sigC [Citr...    73   5e-12
XP_006450763.1 hypothetical protein CICLE_v10007968mg [Citrus cl...    73   5e-12
XP_002275831.1 PREDICTED: RNA polymerase sigma factor sigC [Viti...    73   5e-12
XP_006355305.1 PREDICTED: RNA polymerase sigma factor sigC isofo...    72   1e-11
XP_009757464.1 PREDICTED: RNA polymerase sigma factor sigC isofo...    72   1e-11
KVH89925.1 RNA polymerase sigma-70 [Cynara cardunculus var. scol...    71   2e-11
XP_015085648.1 PREDICTED: RNA polymerase sigma factor sigC [Sola...    70   5e-11
XP_004245130.1 PREDICTED: RNA polymerase sigma factor sigC isofo...    70   5e-11

>XP_017227798.1 PREDICTED: RNA polymerase sigma factor sigC [Daucus carota subsp.
           sativus] KZN11801.1 hypothetical protein DCAR_004457
           [Daucus carota subsp. sativus]
          Length = 553

 Score = 90.1 bits (222), Expect = 5e-18
 Identities = 44/81 (54%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
 Frame = +3

Query: 249 IGMGFRLNLKWVFSVQSPSL-TNSATWPSSYSFRGMEGSYDSARXXXXXXXXGESEALYN 425
           +G+GFRLN +W  SV+ P   T S++WPSSYSFR ME SYD+ R        GE E ++N
Sbjct: 1   MGIGFRLNFRWASSVRYPYYCTTSSSWPSSYSFRAMEASYDTTRVSFPYFVLGEIETMHN 60

Query: 426 DPLRAHICSSAAQTLSNDYTE 488
           D  R H C+SAAQTLSN+Y E
Sbjct: 61  DLPRVHSCASAAQTLSNNYLE 81


>XP_006450755.1 hypothetical protein CICLE_v10007968mg [Citrus clementina]
           XP_006450756.1 hypothetical protein CICLE_v10007968mg
           [Citrus clementina] XP_006450760.1 hypothetical protein
           CICLE_v10007968mg [Citrus clementina] XP_006450761.1
           hypothetical protein CICLE_v10007968mg [Citrus
           clementina] ESR63995.1 hypothetical protein
           CICLE_v10007968mg [Citrus clementina] ESR63996.1
           hypothetical protein CICLE_v10007968mg [Citrus
           clementina] ESR64000.1 hypothetical protein
           CICLE_v10007968mg [Citrus clementina] ESR64001.1
           hypothetical protein CICLE_v10007968mg [Citrus
           clementina]
          Length = 286

 Score = 72.8 bits (177), Expect = 2e-12
 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = +3

Query: 249 IGMGFRLNLKWVFSVQSPSLTNSATWPSSYSFRGMEGSYDSARXXXXXXXXGESEALYND 428
           +GMGFRLNLKWV  VQS   T S+   SS S RG EGS++SAR         +S + + D
Sbjct: 1   MGMGFRLNLKWVSPVQSHFFTTSSCRLSSTSVRGREGSFNSARLSFLSTISEDSASYFQD 60

Query: 429 PLRAHICSSA-AQTLSNDYTE 488
           P++A+ CS    QT+ NDY+E
Sbjct: 61  PVKAYTCSFVNTQTVENDYSE 81


>KDO79967.1 hypothetical protein CISIN_1g009449mg [Citrus sinensis] KDO79968.1
           hypothetical protein CISIN_1g009449mg [Citrus sinensis]
          Length = 344

 Score = 72.8 bits (177), Expect = 4e-12
 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = +3

Query: 249 IGMGFRLNLKWVFSVQSPSLTNSATWPSSYSFRGMEGSYDSARXXXXXXXXGESEALYND 428
           +GMGFRLNLKWV  VQS   T S+   SS S RG EGS++SAR         +S + + D
Sbjct: 1   MGMGFRLNLKWVSPVQSHFFTTSSCRLSSTSVRGREGSFNSARLSFLSTISEDSASYFQD 60

Query: 429 PLRAHICSSA-AQTLSNDYTE 488
           P++A+ CS    QT+ NDY+E
Sbjct: 61  PVKAYTCSFVNTQTVENDYSE 81


>KDO79963.1 hypothetical protein CISIN_1g009449mg [Citrus sinensis]
          Length = 368

 Score = 72.8 bits (177), Expect = 4e-12
 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = +3

Query: 249 IGMGFRLNLKWVFSVQSPSLTNSATWPSSYSFRGMEGSYDSARXXXXXXXXGESEALYND 428
           +GMGFRLNLKWV  VQS   T S+   SS S RG EGS++SAR         +S + + D
Sbjct: 1   MGMGFRLNLKWVSPVQSHFFTTSSCRLSSTSVRGREGSFNSARLSFLSTISEDSASYFQD 60

Query: 429 PLRAHICSSA-AQTLSNDYTE 488
           P++A+ CS    QT+ NDY+E
Sbjct: 61  PVKAYTCSFVNTQTVENDYSE 81


>KDO79965.1 hypothetical protein CISIN_1g009449mg [Citrus sinensis] KDO79966.1
           hypothetical protein CISIN_1g009449mg [Citrus sinensis]
          Length = 381

 Score = 72.8 bits (177), Expect = 4e-12
 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = +3

Query: 249 IGMGFRLNLKWVFSVQSPSLTNSATWPSSYSFRGMEGSYDSARXXXXXXXXGESEALYND 428
           +GMGFRLNLKWV  VQS   T S+   SS S RG EGS++SAR         +S + + D
Sbjct: 1   MGMGFRLNLKWVSPVQSHFFTTSSCRLSSTSVRGREGSFNSARLSFLSTISEDSASYFQD 60

Query: 429 PLRAHICSSA-AQTLSNDYTE 488
           P++A+ CS    QT+ NDY+E
Sbjct: 61  PVKAYTCSFVNTQTVENDYSE 81


>XP_006450757.1 hypothetical protein CICLE_v10007968mg [Citrus clementina]
           XP_006450762.1 hypothetical protein CICLE_v10007968mg
           [Citrus clementina] ESR63997.1 hypothetical protein
           CICLE_v10007968mg [Citrus clementina] ESR64002.1
           hypothetical protein CICLE_v10007968mg [Citrus
           clementina]
          Length = 381

 Score = 72.8 bits (177), Expect = 4e-12
 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = +3

Query: 249 IGMGFRLNLKWVFSVQSPSLTNSATWPSSYSFRGMEGSYDSARXXXXXXXXGESEALYND 428
           +GMGFRLNLKWV  VQS   T S+   SS S RG EGS++SAR         +S + + D
Sbjct: 1   MGMGFRLNLKWVSPVQSHFFTTSSCRLSSTSVRGREGSFNSARLSFLSTISEDSASYFQD 60

Query: 429 PLRAHICSSA-AQTLSNDYTE 488
           P++A+ CS    QT+ NDY+E
Sbjct: 61  PVKAYTCSFVNTQTVENDYSE 81


>KDO79964.1 hypothetical protein CISIN_1g009449mg [Citrus sinensis]
          Length = 383

 Score = 72.8 bits (177), Expect = 4e-12
 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = +3

Query: 249 IGMGFRLNLKWVFSVQSPSLTNSATWPSSYSFRGMEGSYDSARXXXXXXXXGESEALYND 428
           +GMGFRLNLKWV  VQS   T S+   SS S RG EGS++SAR         +S + + D
Sbjct: 1   MGMGFRLNLKWVSPVQSHFFTTSSCRLSSTSVRGREGSFNSARLSFLSTISEDSASYFQD 60

Query: 429 PLRAHICSSA-AQTLSNDYTE 488
           P++A+ CS    QT+ NDY+E
Sbjct: 61  PVKAYTCSFVNTQTVENDYSE 81


>XP_006450758.1 hypothetical protein CICLE_v10007968mg [Citrus clementina]
           XP_006450759.1 hypothetical protein CICLE_v10007968mg
           [Citrus clementina] ESR63998.1 hypothetical protein
           CICLE_v10007968mg [Citrus clementina] ESR63999.1
           hypothetical protein CICLE_v10007968mg [Citrus
           clementina]
          Length = 383

 Score = 72.8 bits (177), Expect = 4e-12
 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = +3

Query: 249 IGMGFRLNLKWVFSVQSPSLTNSATWPSSYSFRGMEGSYDSARXXXXXXXXGESEALYND 428
           +GMGFRLNLKWV  VQS   T S+   SS S RG EGS++SAR         +S + + D
Sbjct: 1   MGMGFRLNLKWVSPVQSHFFTTSSCRLSSTSVRGREGSFNSARLSFLSTISEDSASYFQD 60

Query: 429 PLRAHICSSA-AQTLSNDYTE 488
           P++A+ CS    QT+ NDY+E
Sbjct: 61  PVKAYTCSFVNTQTVENDYSE 81


>KDO79962.1 hypothetical protein CISIN_1g009449mg [Citrus sinensis]
          Length = 442

 Score = 72.8 bits (177), Expect = 5e-12
 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = +3

Query: 249 IGMGFRLNLKWVFSVQSPSLTNSATWPSSYSFRGMEGSYDSARXXXXXXXXGESEALYND 428
           +GMGFRLNLKWV  VQS   T S+   SS S RG EGS++SAR         +S + + D
Sbjct: 1   MGMGFRLNLKWVSPVQSHFFTTSSCRLSSTSVRGREGSFNSARLSFLSTISEDSASYFQD 60

Query: 429 PLRAHICSSA-AQTLSNDYTE 488
           P++A+ CS    QT+ NDY+E
Sbjct: 61  PVKAYTCSFVNTQTVENDYSE 81


>XP_006450764.1 hypothetical protein CICLE_v10007968mg [Citrus clementina]
           ESR64004.1 hypothetical protein CICLE_v10007968mg
           [Citrus clementina]
          Length = 442

 Score = 72.8 bits (177), Expect = 5e-12
 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = +3

Query: 249 IGMGFRLNLKWVFSVQSPSLTNSATWPSSYSFRGMEGSYDSARXXXXXXXXGESEALYND 428
           +GMGFRLNLKWV  VQS   T S+   SS S RG EGS++SAR         +S + + D
Sbjct: 1   MGMGFRLNLKWVSPVQSHFFTTSSCRLSSTSVRGREGSFNSARLSFLSTISEDSASYFQD 60

Query: 429 PLRAHICSSA-AQTLSNDYTE 488
           P++A+ CS    QT+ NDY+E
Sbjct: 61  PVKAYTCSFVNTQTVENDYSE 81


>KDO79961.1 hypothetical protein CISIN_1g009449mg [Citrus sinensis]
          Length = 459

 Score = 72.8 bits (177), Expect = 5e-12
 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = +3

Query: 249 IGMGFRLNLKWVFSVQSPSLTNSATWPSSYSFRGMEGSYDSARXXXXXXXXGESEALYND 428
           +GMGFRLNLKWV  VQS   T S+   SS S RG EGS++SAR         +S + + D
Sbjct: 1   MGMGFRLNLKWVSPVQSHFFTTSSCRLSSTSVRGREGSFNSARLSFLSTISEDSASYFQD 60

Query: 429 PLRAHICSSA-AQTLSNDYTE 488
           P++A+ CS    QT+ NDY+E
Sbjct: 61  PVKAYTCSFVNTQTVENDYSE 81


>KDO79960.1 hypothetical protein CISIN_1g009449mg [Citrus sinensis]
          Length = 534

 Score = 72.8 bits (177), Expect = 5e-12
 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = +3

Query: 249 IGMGFRLNLKWVFSVQSPSLTNSATWPSSYSFRGMEGSYDSARXXXXXXXXGESEALYND 428
           +GMGFRLNLKWV  VQS   T S+   SS S RG EGS++SAR         +S + + D
Sbjct: 1   MGMGFRLNLKWVSPVQSHFFTTSSCRLSSTSVRGREGSFNSARLSFLSTISEDSASYFQD 60

Query: 429 PLRAHICSSA-AQTLSNDYTE 488
           P++A+ CS    QT+ NDY+E
Sbjct: 61  PVKAYTCSFVNTQTVENDYSE 81


>XP_006475980.1 PREDICTED: RNA polymerase sigma factor sigC [Citrus sinensis]
          Length = 534

 Score = 72.8 bits (177), Expect = 5e-12
 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = +3

Query: 249 IGMGFRLNLKWVFSVQSPSLTNSATWPSSYSFRGMEGSYDSARXXXXXXXXGESEALYND 428
           +GMGFRLNLKWV  VQS   T S+   SS S RG EGS++SAR         +S + + D
Sbjct: 1   MGMGFRLNLKWVSPVQSHFFTTSSCRLSSTSVRGREGSFNSARLSFLSTISEDSASYFQD 60

Query: 429 PLRAHICSSA-AQTLSNDYTE 488
           P++A+ CS    QT+ NDY+E
Sbjct: 61  PVKAYTCSFVNTQTVENDYSE 81


>XP_006450763.1 hypothetical protein CICLE_v10007968mg [Citrus clementina]
           ESR64003.1 hypothetical protein CICLE_v10007968mg
           [Citrus clementina]
          Length = 534

 Score = 72.8 bits (177), Expect = 5e-12
 Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = +3

Query: 249 IGMGFRLNLKWVFSVQSPSLTNSATWPSSYSFRGMEGSYDSARXXXXXXXXGESEALYND 428
           +GMGFRLNLKWV  VQS   T S+   SS S RG EGS++SAR         +S + + D
Sbjct: 1   MGMGFRLNLKWVSPVQSHFFTTSSCRLSSTSVRGREGSFNSARLSFLSTISEDSASYFQD 60

Query: 429 PLRAHICSSA-AQTLSNDYTE 488
           P++A+ CS    QT+ NDY+E
Sbjct: 61  PVKAYTCSFVNTQTVENDYSE 81


>XP_002275831.1 PREDICTED: RNA polymerase sigma factor sigC [Vitis vinifera]
           CBI20603.3 unnamed protein product, partial [Vitis
           vinifera]
          Length = 561

 Score = 72.8 bits (177), Expect = 5e-12
 Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
 Frame = +3

Query: 249 IGMGFRLNLKWVFSVQSPSLTNSATWPSSYSFRGMEGSYDSARXXXXXXXXGESEALYND 428
           +GMGFRLNLKW F +  P+LTNS +   + S +G E S+DS R         + E+LY D
Sbjct: 1   MGMGFRLNLKWDFPISCPTLTNSPSRLCTSSVQGKEASFDSTRFSFPSVTSEDCESLYKD 60

Query: 429 PLRAHICSSAA-QTLSNDYT 485
           P +   CSS A QT  NDY+
Sbjct: 61  PFKPFACSSGALQTFENDYS 80


>XP_006355305.1 PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Solanum
           tuberosum]
          Length = 555

 Score = 72.0 bits (175), Expect = 1e-11
 Identities = 36/75 (48%), Positives = 47/75 (62%)
 Frame = +3

Query: 255 MGFRLNLKWVFSVQSPSLTNSATWPSSYSFRGMEGSYDSARXXXXXXXXGESEALYNDPL 434
           MGFRL+LKW FSVQ P  +NS++WPSS+SF+G E  YD AR        G+ E  ++DP 
Sbjct: 1   MGFRLHLKWGFSVQPPFSSNSSSWPSSHSFKGREALYDPAR-SLKPFITGDCEPSHSDPF 59

Query: 435 RAHICSSAAQTLSND 479
           R   C S  Q  ++D
Sbjct: 60  RVQTCLSDPQLWTSD 74


>XP_009757464.1 PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Nicotiana
           sylvestris] XP_016482950.1 PREDICTED: RNA polymerase
           sigma factor sigC-like isoform X2 [Nicotiana tabacum]
          Length = 554

 Score = 71.6 bits (174), Expect = 1e-11
 Identities = 36/75 (48%), Positives = 46/75 (61%)
 Frame = +3

Query: 255 MGFRLNLKWVFSVQSPSLTNSATWPSSYSFRGMEGSYDSARXXXXXXXXGESEALYNDPL 434
           MGFRL+LKW FSVQ P  +NS+ WPSS+SF+G E  YD AR        G+ E  ++DP 
Sbjct: 1   MGFRLHLKWGFSVQPPFSSNSSAWPSSHSFKGKEALYDPAR-SLKPFINGDCEPSHSDPF 59

Query: 435 RAHICSSAAQTLSND 479
           R   C S  Q  ++D
Sbjct: 60  RVRTCLSDPQLWTSD 74


>KVH89925.1 RNA polymerase sigma-70 [Cynara cardunculus var. scolymus]
          Length = 502

 Score = 70.9 bits (172), Expect = 2e-11
 Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
 Frame = +3

Query: 249 IGMGFRLNLKWVFSVQSPSLTNSATWPSS--YSFRGMEGSYDSARXXXXXXXXGESEALY 422
           +G+GFRLNLKW  S+Q P  +NS+ +PSS   SF+G + +YD AR         ESE  Y
Sbjct: 1   MGLGFRLNLKWGLSIQPPLSSNSSFFPSSTYASFKGKDINYDMARVSLPM----ESETSY 56

Query: 423 NDPLRAHICSSAAQTLSNDYTE 488
           NDP+  + CSS ++ L  DY+E
Sbjct: 57  NDPVNGNACSSTSRILDIDYSE 78


>XP_015085648.1 PREDICTED: RNA polymerase sigma factor sigC [Solanum pennellii]
          Length = 551

 Score = 70.1 bits (170), Expect = 5e-11
 Identities = 35/75 (46%), Positives = 47/75 (62%)
 Frame = +3

Query: 255 MGFRLNLKWVFSVQSPSLTNSATWPSSYSFRGMEGSYDSARXXXXXXXXGESEALYNDPL 434
           MGFRL+LKW FS+Q P  +NS++WPSS+SF+G E  YD AR        G+ E  ++DP 
Sbjct: 1   MGFRLHLKWGFSLQPPFSSNSSSWPSSHSFKGRETLYDPAR-SLKPFINGDCEPSHSDPF 59

Query: 435 RAHICSSAAQTLSND 479
           R   C S  Q  ++D
Sbjct: 60  RVQTCLSDPQLWTSD 74


>XP_004245130.1 PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Solanum
           lycopersicum]
          Length = 551

 Score = 70.1 bits (170), Expect = 5e-11
 Identities = 35/75 (46%), Positives = 47/75 (62%)
 Frame = +3

Query: 255 MGFRLNLKWVFSVQSPSLTNSATWPSSYSFRGMEGSYDSARXXXXXXXXGESEALYNDPL 434
           MGFRL+LKW FS+Q P  +NS++WPSS+SF+G E  YD AR        G+ E  ++DP 
Sbjct: 1   MGFRLHLKWGFSLQPPFSSNSSSWPSSHSFKGRETLYDPAR-SLKPFINGDCEPSHSDPF 59

Query: 435 RAHICSSAAQTLSND 479
           R   C S  Q  ++D
Sbjct: 60  RVQTCLSDPQLWTSD 74