BLASTX nr result

ID: Panax24_contig00001952 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00001952
         (502 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

4C7Q_A Chain A, Solution Structure Of The Nt. Gr-rbp1 Rrm Domain       60   7e-09
ALM24951.1 glycine-rich RNA-binding protein [Nicotiana tabacum]        60   3e-08
XP_019235651.1 PREDICTED: glycine-rich RNA-binding protein-like ...    60   3e-08
XP_009774643.1 PREDICTED: glycine-rich RNA-binding protein-like ...    60   3e-08
XP_018628073.1 PREDICTED: glycine-rich RNA-binding protein GRP1A...    58   7e-08
KJB78453.1 hypothetical protein B456_013G036800 [Gossypium raimo...    58   8e-08
XP_009804249.1 PREDICTED: glycine-rich RNA-binding protein-like ...    59   1e-07
XP_018631357.1 PREDICTED: glycine-rich RNA-binding protein-like ...    58   1e-07
KJB78451.1 hypothetical protein B456_013G036800 [Gossypium raimo...    58   1e-07
XP_019252028.1 PREDICTED: glycine-rich RNA-binding protein-like ...    59   1e-07
AAC50020.1 RNA-binding protein [Nicotiana glutinosa]                   58   1e-07
ACD03270.1 glycine-rich RNA-binding protein [Nicotiana tabacum]        58   1e-07
XP_009607320.1 PREDICTED: glycine-rich RNA-binding protein-like ...    58   1e-07
XP_018631356.1 PREDICTED: glycine-rich RNA-binding protein-like ...    58   1e-07
NP_001307045.1 glycine-rich RNA-binding protein [Solanum lycoper...    58   2e-07
XP_006365107.1 PREDICTED: glycine-rich RNA-binding protein blt80...    58   2e-07
ABB87126.1 putative glycine-rich RNA binding protein-like [Solan...    58   2e-07
XP_006365106.1 PREDICTED: glycine-rich RNA-binding protein blt80...    58   2e-07
KJB78452.1 hypothetical protein B456_013G036800 [Gossypium raimo...    58   2e-07
XP_015159774.1 PREDICTED: glycine-rich RNA-binding protein-like ...    58   2e-07

>4C7Q_A Chain A, Solution Structure Of The Nt. Gr-rbp1 Rrm Domain
          Length = 86

 Score = 59.7 bits (143), Expect = 7e-09
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -1

Query: 502 DEKAMRDAIEGMNGQDLDGRNITVNEAQ 419
           DEKAMRDAIEGMNGQDLDGRNITVNEAQ
Sbjct: 57  DEKAMRDAIEGMNGQDLDGRNITVNEAQ 84


>ALM24951.1 glycine-rich RNA-binding protein [Nicotiana tabacum]
          Length = 154

 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -1

Query: 502 DEKAMRDAIEGMNGQDLDGRNITVNEAQ 419
           DEKAMRDAIEGMNGQDLDGRNITVNEAQ
Sbjct: 56  DEKAMRDAIEGMNGQDLDGRNITVNEAQ 83


>XP_019235651.1 PREDICTED: glycine-rich RNA-binding protein-like [Nicotiana
           attenuata] OIT25329.1 glycine-rich rna-binding protein
           [Nicotiana attenuata]
          Length = 156

 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -1

Query: 502 DEKAMRDAIEGMNGQDLDGRNITVNEAQ 419
           DEKAMRDAIEGMNGQDLDGRNITVNEAQ
Sbjct: 56  DEKAMRDAIEGMNGQDLDGRNITVNEAQ 83


>XP_009774643.1 PREDICTED: glycine-rich RNA-binding protein-like [Nicotiana
           sylvestris] XP_016479391.1 PREDICTED: glycine-rich
           RNA-binding protein-like [Nicotiana tabacum] BAA03741.1
           RNA-binding glycine-rich protein-1a [Nicotiana
           sylvestris] ADG03637.1 RNA-binding glycine-rich protein
           [Nicotiana tabacum]
          Length = 156

 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -1

Query: 502 DEKAMRDAIEGMNGQDLDGRNITVNEAQ 419
           DEKAMRDAIEGMNGQDLDGRNITVNEAQ
Sbjct: 56  DEKAMRDAIEGMNGQDLDGRNITVNEAQ 83


>XP_018628073.1 PREDICTED: glycine-rich RNA-binding protein GRP1A-like isoform X2
           [Nicotiana tomentosiformis]
          Length = 130

 Score = 58.2 bits (139), Expect = 7e-08
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -1

Query: 502 DEKAMRDAIEGMNGQDLDGRNITVNEAQ 419
           DE+AMRDAIEGMNGQDLDGRNITVNEAQ
Sbjct: 56  DEQAMRDAIEGMNGQDLDGRNITVNEAQ 83


>KJB78453.1 hypothetical protein B456_013G036800 [Gossypium raimondii]
          Length = 116

 Score = 57.8 bits (138), Expect = 8e-08
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -1

Query: 502 DEKAMRDAIEGMNGQDLDGRNITVNEAQ 419
           DEKAMRDAIEGMNGQ+LDGRNITVNEAQ
Sbjct: 58  DEKAMRDAIEGMNGQNLDGRNITVNEAQ 85


>XP_009804249.1 PREDICTED: glycine-rich RNA-binding protein-like [Nicotiana
           sylvestris] XP_016461536.1 PREDICTED: glycine-rich
           RNA-binding protein-like [Nicotiana tabacum] BAA03743.1
           RNA-binding gricine-rich protein-1c [Nicotiana
           sylvestris]
          Length = 165

 Score = 58.5 bits (140), Expect = 1e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -1

Query: 502 DEKAMRDAIEGMNGQDLDGRNITVNEAQ 419
           DEK+MRDAIEGMNGQDLDGRNITVNEAQ
Sbjct: 56  DEKSMRDAIEGMNGQDLDGRNITVNEAQ 83


>XP_018631357.1 PREDICTED: glycine-rich RNA-binding protein-like isoform X4
           [Nicotiana tomentosiformis]
          Length = 132

 Score = 57.8 bits (138), Expect = 1e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -1

Query: 502 DEKAMRDAIEGMNGQDLDGRNITVNEAQ 419
           DEKAMRDAIEGMNGQ+LDGRNITVNEAQ
Sbjct: 57  DEKAMRDAIEGMNGQNLDGRNITVNEAQ 84


>KJB78451.1 hypothetical protein B456_013G036800 [Gossypium raimondii]
          Length = 133

 Score = 57.8 bits (138), Expect = 1e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -1

Query: 502 DEKAMRDAIEGMNGQDLDGRNITVNEAQ 419
           DEKAMRDAIEGMNGQ+LDGRNITVNEAQ
Sbjct: 58  DEKAMRDAIEGMNGQNLDGRNITVNEAQ 85


>XP_019252028.1 PREDICTED: glycine-rich RNA-binding protein-like [Nicotiana
           attenuata] OIS99314.1 glycine-rich rna-binding protein
           [Nicotiana attenuata]
          Length = 170

 Score = 58.5 bits (140), Expect = 1e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -1

Query: 502 DEKAMRDAIEGMNGQDLDGRNITVNEAQ 419
           DEK+MRDAIEGMNGQDLDGRNITVNEAQ
Sbjct: 56  DEKSMRDAIEGMNGQDLDGRNITVNEAQ 83


>AAC50020.1 RNA-binding protein [Nicotiana glutinosa]
          Length = 156

 Score = 58.2 bits (139), Expect = 1e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -1

Query: 502 DEKAMRDAIEGMNGQDLDGRNITVNEAQ 419
           DE+AMRDAIEGMNGQDLDGRNITVNEAQ
Sbjct: 56  DEQAMRDAIEGMNGQDLDGRNITVNEAQ 83


>ACD03270.1 glycine-rich RNA-binding protein [Nicotiana tabacum]
          Length = 157

 Score = 58.2 bits (139), Expect = 1e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -1

Query: 502 DEKAMRDAIEGMNGQDLDGRNITVNEAQ 419
           DE+AMRDAIEGMNGQDLDGRNITVNEAQ
Sbjct: 56  DEQAMRDAIEGMNGQDLDGRNITVNEAQ 83


>XP_009607320.1 PREDICTED: glycine-rich RNA-binding protein-like isoform X1
           [Nicotiana tomentosiformis] XP_016473096.1 PREDICTED:
           glycine-rich RNA-binding protein-like [Nicotiana
           tabacum]
          Length = 157

 Score = 58.2 bits (139), Expect = 1e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -1

Query: 502 DEKAMRDAIEGMNGQDLDGRNITVNEAQ 419
           DE+AMRDAIEGMNGQDLDGRNITVNEAQ
Sbjct: 56  DEQAMRDAIEGMNGQDLDGRNITVNEAQ 83


>XP_018631356.1 PREDICTED: glycine-rich RNA-binding protein-like isoform X2
           [Nicotiana tomentosiformis]
          Length = 149

 Score = 57.8 bits (138), Expect = 1e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -1

Query: 502 DEKAMRDAIEGMNGQDLDGRNITVNEAQ 419
           DEKAMRDAIEGMNGQ+LDGRNITVNEAQ
Sbjct: 57  DEKAMRDAIEGMNGQNLDGRNITVNEAQ 84


>NP_001307045.1 glycine-rich RNA-binding protein [Solanum lycopersicum]
           XP_015057354.1 PREDICTED: glycine-rich RNA-binding
           protein-like [Solanum pennellii]
          Length = 175

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -1

Query: 502 DEKAMRDAIEGMNGQDLDGRNITVNEAQ 419
           DE+AMRDAIEGMNGQDLDGRNITVNEAQ
Sbjct: 56  DEQAMRDAIEGMNGQDLDGRNITVNEAQ 83


>XP_006365107.1 PREDICTED: glycine-rich RNA-binding protein blt801-like isoform X3
           [Solanum tuberosum]
          Length = 176

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -1

Query: 502 DEKAMRDAIEGMNGQDLDGRNITVNEAQ 419
           DE+AMRDAIEGMNGQDLDGRNITVNEAQ
Sbjct: 56  DEQAMRDAIEGMNGQDLDGRNITVNEAQ 83


>ABB87126.1 putative glycine-rich RNA binding protein-like [Solanum tuberosum]
          Length = 178

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -1

Query: 502 DEKAMRDAIEGMNGQDLDGRNITVNEAQ 419
           DE+AMRDAIEGMNGQDLDGRNITVNEAQ
Sbjct: 56  DEQAMRDAIEGMNGQDLDGRNITVNEAQ 83


>XP_006365106.1 PREDICTED: glycine-rich RNA-binding protein blt801-like isoform X2
           [Solanum tuberosum]
          Length = 178

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -1

Query: 502 DEKAMRDAIEGMNGQDLDGRNITVNEAQ 419
           DE+AMRDAIEGMNGQDLDGRNITVNEAQ
Sbjct: 56  DEQAMRDAIEGMNGQDLDGRNITVNEAQ 83


>KJB78452.1 hypothetical protein B456_013G036800 [Gossypium raimondii]
          Length = 158

 Score = 57.8 bits (138), Expect = 2e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -1

Query: 502 DEKAMRDAIEGMNGQDLDGRNITVNEAQ 419
           DEKAMRDAIEGMNGQ+LDGRNITVNEAQ
Sbjct: 58  DEKAMRDAIEGMNGQNLDGRNITVNEAQ 85


>XP_015159774.1 PREDICTED: glycine-rich RNA-binding protein-like isoform X1
           [Solanum tuberosum]
          Length = 180

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = -1

Query: 502 DEKAMRDAIEGMNGQDLDGRNITVNEAQ 419
           DE+AMRDAIEGMNGQDLDGRNITVNEAQ
Sbjct: 56  DEQAMRDAIEGMNGQDLDGRNITVNEAQ 83


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