BLASTX nr result
ID: Panax24_contig00001543
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00001543
(1294 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAA73171.1 histone H1 [Apium graveolens] 104 1e-21
XP_017237012.1 PREDICTED: histone H1 [Daucus carota subsp. sativ... 99 9e-20
XP_013631826.1 PREDICTED: histone H1.2 [Brassica oleracea var. o... 96 6e-19
XP_009141087.1 PREDICTED: histone H1.2 [Brassica rapa] XP_013643... 93 1e-17
XP_007050394.2 PREDICTED: histone H1 [Theobroma cacao] 92 2e-17
EOX94551.1 Winged-helix DNA-binding transcription factor family ... 92 2e-17
CBI35178.3 unnamed protein product, partial [Vitis vinifera] 89 3e-17
KNA21321.1 hypothetical protein SOVF_044060 [Spinacia oleracea] 92 3e-17
JAU37847.1 Histone H1.2 [Noccaea caerulescens] 91 6e-17
NP_001189643.1 winged-helix DNA-binding transcription factor fam... 89 6e-17
JAU53476.1 Histone H1.2 [Noccaea caerulescens] 91 6e-17
XP_010679186.1 PREDICTED: histone H1 [Beta vulgaris subsp. vulga... 91 9e-17
XP_012473820.1 PREDICTED: histone H1-like isoform X2 [Gossypium ... 90 1e-16
XP_016699758.1 PREDICTED: histone H1-like [Gossypium hirsutum] 90 1e-16
XP_016675067.1 PREDICTED: histone H1-like [Gossypium hirsutum] X... 90 1e-16
XP_012473819.1 PREDICTED: histone H1-like isoform X1 [Gossypium ... 90 1e-16
OAY44265.1 hypothetical protein MANES_08G136300 [Manihot esculenta] 89 1e-16
XP_013722567.1 PREDICTED: histone H1.2-like [Brassica napus] CDX... 90 1e-16
KJB42223.1 hypothetical protein B456_007G143000 [Gossypium raimo... 89 2e-16
ACU21235.1 unknown, partial [Glycine max] 86 2e-16
>CAA73171.1 histone H1 [Apium graveolens]
Length = 302
Score = 104 bits (260), Expect = 1e-21
Identities = 64/136 (47%), Positives = 73/136 (53%), Gaps = 1/136 (0%)
Frame = +1
Query: 28 MAAVEESILPTEVAEDSIPTPASELPEEK-PAAEDXXXXXXXXXXXXXXXXXXXXXXXXX 204
MAAVE+ I+P E E+ +P +E PEE P AED
Sbjct: 1 MAAVEDPIVPMEGVEEEVPVTVTEAPEEAAPPAEDPAPKKGKELKPKKAAAPRKPRSAP- 59
Query: 205 XXXTHPSYLEMITDAITALKERNGSSQFAIQKFIEEKQKHLSGAFRXXXXXXXXXXTAAG 384
HP YLEMITDAIT+LKER GSSQ AIQKF+E K K L FR AAG
Sbjct: 60 ---AHPPYLEMITDAITSLKERTGSSQQAIQKFLEAKHKDLPAVFRKMLSNNLKKLVAAG 116
Query: 385 KLVKIKNSYKLPSTRS 432
KLVK+K SYKLPS +S
Sbjct: 117 KLVKVKASYKLPSAKS 132
>XP_017237012.1 PREDICTED: histone H1 [Daucus carota subsp. sativus] KZN05810.1
hypothetical protein DCAR_006647 [Daucus carota subsp.
sativus]
Length = 300
Score = 99.4 bits (246), Expect = 9e-20
Identities = 59/135 (43%), Positives = 70/135 (51%)
Frame = +1
Query: 28 MAAVEESILPTEVAEDSIPTPASELPEEKPAAEDXXXXXXXXXXXXXXXXXXXXXXXXXX 207
MA VEE+I+P E ED++P A+E+ E+ +
Sbjct: 1 MAGVEEAIVPMEGVEDAVPVTATEVAEDAAPPAEEPPTKKGKVAKETKPKKAAAPRKPRS 60
Query: 208 XXTHPSYLEMITDAITALKERNGSSQFAIQKFIEEKQKHLSGAFRXXXXXXXXXXTAAGK 387
HPSYLEMITDAIT+LKER GSS AIQKF+E K K L FR AAGK
Sbjct: 61 APAHPSYLEMITDAITSLKERTGSSPQAIQKFLEAKHKQLPTVFRKMLSYNLKKLEAAGK 120
Query: 388 LVKIKNSYKLPSTRS 432
LVKIK SYKL R+
Sbjct: 121 LVKIKASYKLAPARA 135
>XP_013631826.1 PREDICTED: histone H1.2 [Brassica oleracea var. oleracea]
Length = 268
Score = 96.3 bits (238), Expect = 6e-19
Identities = 59/133 (44%), Positives = 72/133 (54%)
Frame = +1
Query: 34 AVEESILPTEVAEDSIPTPASELPEEKPAAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXX 213
+ EE +PT V E++ PASE +KPAA+
Sbjct: 2 SAEEETVPTNV-EETTTAPASE---KKPAAKGGKAKKTKEVKAAAAAPKKKPAPRKRASS 57
Query: 214 THPSYLEMITDAITALKERNGSSQFAIQKFIEEKQKHLSGAFRXXXXXXXXXXTAAGKLV 393
+HP+Y EMI DAIT LKER GSSQ+AIQKFIEEKQK L FR A+GKLV
Sbjct: 58 SHPTYEEMIKDAITTLKERTGSSQYAIQKFIEEKQKSLPPTFRKLLLVNLKRLVASGKLV 117
Query: 394 KIKNSYKLPSTRS 432
K+K S+KLPS +S
Sbjct: 118 KVKGSFKLPSAKS 130
>XP_009141087.1 PREDICTED: histone H1.2 [Brassica rapa] XP_013643573.1 PREDICTED:
histone H1.2-like [Brassica napus] CDY29656.1
BnaA04g17710D [Brassica napus]
Length = 270
Score = 92.8 bits (229), Expect = 1e-17
Identities = 59/135 (43%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Frame = +1
Query: 34 AVEESILPTEVAEDSIPTPASELPEEKPAAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXX 213
+ EE +PT V E+++ PASE +KPAA+
Sbjct: 2 SAEEETVPTNV-EETVTAPASE---KKPAAKGGKAKKTKEVKAAAAPKKKPAAKSPRKRA 57
Query: 214 T--HPSYLEMITDAITALKERNGSSQFAIQKFIEEKQKHLSGAFRXXXXXXXXXXTAAGK 387
+ HP+Y EMI DAIT LKER GSSQ+AIQKFIEEKQK L FR A+GK
Sbjct: 58 SSSHPTYEEMIKDAITTLKERTGSSQYAIQKFIEEKQKSLPPTFRKLLLVNLKRLVASGK 117
Query: 388 LVKIKNSYKLPSTRS 432
LVK+K S+KLPS +S
Sbjct: 118 LVKVKGSFKLPSAKS 132
>XP_007050394.2 PREDICTED: histone H1 [Theobroma cacao]
Length = 284
Score = 92.0 bits (227), Expect = 2e-17
Identities = 45/73 (61%), Positives = 52/73 (71%)
Frame = +1
Query: 214 THPSYLEMITDAITALKERNGSSQFAIQKFIEEKQKHLSGAFRXXXXXXXXXXTAAGKLV 393
+HP Y EMI DA+ LKE+ GSSQ+AI KFIEEKQKHL G F+ AAGKLV
Sbjct: 55 SHPPYEEMIKDAVVTLKEKTGSSQYAITKFIEEKQKHLPGTFKKLLLFHLKKLVAAGKLV 114
Query: 394 KIKNSYKLPSTRS 432
K+KNS+KLPS RS
Sbjct: 115 KVKNSFKLPSARS 127
>EOX94551.1 Winged-helix DNA-binding transcription factor family protein
[Theobroma cacao]
Length = 284
Score = 92.0 bits (227), Expect = 2e-17
Identities = 45/73 (61%), Positives = 52/73 (71%)
Frame = +1
Query: 214 THPSYLEMITDAITALKERNGSSQFAIQKFIEEKQKHLSGAFRXXXXXXXXXXTAAGKLV 393
+HP Y EMI DA+ LKE+ GSSQ+AI KFIEEKQKHL G F+ AAGKLV
Sbjct: 55 SHPPYEEMIKDAVVTLKEKTGSSQYAITKFIEEKQKHLPGTFKKLLLFHLKKLVAAGKLV 114
Query: 394 KIKNSYKLPSTRS 432
K+KNS+KLPS RS
Sbjct: 115 KVKNSFKLPSARS 127
>CBI35178.3 unnamed protein product, partial [Vitis vinifera]
Length = 177
Score = 89.0 bits (219), Expect = 3e-17
Identities = 46/73 (63%), Positives = 52/73 (71%)
Frame = +1
Query: 214 THPSYLEMITDAITALKERNGSSQFAIQKFIEEKQKHLSGAFRXXXXXXXXXXTAAGKLV 393
THP +LEMIT+AI ALKER GSSQ+AI KFIEEK K L FR A+ KLV
Sbjct: 58 THPPFLEMITEAIVALKERTGSSQYAITKFIEEKHKKLPSNFRKLLLVHLKKLVASEKLV 117
Query: 394 KIKNSYKLPSTRS 432
K+KNSYKLPS+RS
Sbjct: 118 KVKNSYKLPSSRS 130
>KNA21321.1 hypothetical protein SOVF_044060 [Spinacia oleracea]
Length = 306
Score = 92.0 bits (227), Expect = 3e-17
Identities = 56/136 (41%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
Frame = +1
Query: 28 MAAVEESILPTEVAEDSIPTPA-SELPEEKPAAEDXXXXXXXXXXXXXXXXXXXXXXXXX 204
MAA EE I+ V ++ PA E P E A +
Sbjct: 1 MAATEEPIVAAPVEQEVASVPAVEEAPVETTPAAEEVAGKAKKVKETKPKKAVTGPKKAR 60
Query: 205 XXXTHPSYLEMITDAITALKERNGSSQFAIQKFIEEKQKHLSGAFRXXXXXXXXXXTAAG 384
THP+Y EM+++AI+ LKERNGSSQ AIQKFIEEK K+L FR A+G
Sbjct: 61 KASTHPTYYEMMSEAISTLKERNGSSQKAIQKFIEEKHKNLPPTFRKLLLVNLRKFVASG 120
Query: 385 KLVKIKNSYKLPSTRS 432
+ VK+K SYKLP TRS
Sbjct: 121 RFVKVKGSYKLPPTRS 136
>JAU37847.1 Histone H1.2 [Noccaea caerulescens]
Length = 283
Score = 90.9 bits (224), Expect = 6e-17
Identities = 62/139 (44%), Positives = 76/139 (54%), Gaps = 4/139 (2%)
Frame = +1
Query: 28 MAAVEESILPTEV----AEDSIPTPASELPEEKPAAEDXXXXXXXXXXXXXXXXXXXXXX 195
M+A EE++ PT V A+ ++ TPASE +KPAA+
Sbjct: 1 MSAEEENV-PTTVESGDADAAVTTPASE---KKPAAKGAKAKKTKEVKAKKPAAAKAPRK 56
Query: 196 XXXXXXTHPSYLEMITDAITALKERNGSSQFAIQKFIEEKQKHLSGAFRXXXXXXXXXXT 375
+HP+Y EMI DAI LKER GSSQ+AIQKFIEEKQK L FR
Sbjct: 57 KTAS--SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKQKSLPPTFRKLLLVNLKRLV 114
Query: 376 AAGKLVKIKNSYKLPSTRS 432
A+GKLVK+K S+KLPS RS
Sbjct: 115 ASGKLVKVKASFKLPSARS 133
>NP_001189643.1 winged-helix DNA-binding transcription factor family protein
[Arabidopsis thaliana] AEC08420.1 winged-helix
DNA-binding transcription factor family protein
[Arabidopsis thaliana]
Length = 202
Score = 89.0 bits (219), Expect = 6e-17
Identities = 54/133 (40%), Positives = 67/133 (50%)
Frame = +1
Query: 34 AVEESILPTEVAEDSIPTPASELPEEKPAAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXX 213
++EE +PT V + T PE+KPAA+
Sbjct: 2 SIEEENVPTTVDSGAADTTVKS-PEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTS 60
Query: 214 THPSYLEMITDAITALKERNGSSQFAIQKFIEEKQKHLSGAFRXXXXXXXXXXTAAGKLV 393
+HP+Y EMI DAI LKER GSSQ+AIQKFIEEK K L FR A+ KLV
Sbjct: 61 SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLV 120
Query: 394 KIKNSYKLPSTRS 432
K+K S+K+PS RS
Sbjct: 121 KVKASFKIPSARS 133
>JAU53476.1 Histone H1.2 [Noccaea caerulescens]
Length = 284
Score = 90.9 bits (224), Expect = 6e-17
Identities = 62/139 (44%), Positives = 76/139 (54%), Gaps = 4/139 (2%)
Frame = +1
Query: 28 MAAVEESILPTEV----AEDSIPTPASELPEEKPAAEDXXXXXXXXXXXXXXXXXXXXXX 195
M+A EE++ PT V A+ ++ TPASE +KPAA+
Sbjct: 1 MSAEEENV-PTTVESGDADAAVTTPASE---KKPAAKGAKAKKTKEVKAKKPAAAKAPRK 56
Query: 196 XXXXXXTHPSYLEMITDAITALKERNGSSQFAIQKFIEEKQKHLSGAFRXXXXXXXXXXT 375
+HP+Y EMI DAI LKER GSSQ+AIQKFIEEKQK L FR
Sbjct: 57 KTAS--SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKQKSLPPTFRKLLLVNLKRLV 114
Query: 376 AAGKLVKIKNSYKLPSTRS 432
A+GKLVK+K S+KLPS RS
Sbjct: 115 ASGKLVKVKASFKLPSARS 133
>XP_010679186.1 PREDICTED: histone H1 [Beta vulgaris subsp. vulgaris] KMT10292.1
hypothetical protein BVRB_5g120470 [Beta vulgaris subsp.
vulgaris]
Length = 305
Score = 90.9 bits (224), Expect = 9e-17
Identities = 59/136 (43%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
Frame = +1
Query: 28 MAAVEESIL-PTEVAEDSIPTPASELPEEKPAAEDXXXXXXXXXXXXXXXXXXXXXXXXX 204
MAA EE I+ PTE S P EE E+
Sbjct: 1 MAATEEPIVEPTEQEVASAPVVEDVPAEENHVVEEAGGKAKKTKAKKPAAPRKRNS---- 56
Query: 205 XXXTHPSYLEMITDAITALKERNGSSQFAIQKFIEEKQKHLSGAFRXXXXXXXXXXTAAG 384
THP Y EM+++AIT LKERNGSSQ AIQKFIEEK K+L FR A+G
Sbjct: 57 ---THPPYFEMMSEAITTLKERNGSSQHAIQKFIEEKHKNLPSNFRKLLLVNLKKFVASG 113
Query: 385 KLVKIKNSYKLPSTRS 432
+LVK+K S+KLPSTRS
Sbjct: 114 RLVKVKGSFKLPSTRS 129
>XP_012473820.1 PREDICTED: histone H1-like isoform X2 [Gossypium raimondii]
KJB22926.1 hypothetical protein B456_004G074200
[Gossypium raimondii]
Length = 276
Score = 90.1 bits (222), Expect = 1e-16
Identities = 47/73 (64%), Positives = 51/73 (69%)
Frame = +1
Query: 214 THPSYLEMITDAITALKERNGSSQFAIQKFIEEKQKHLSGAFRXXXXXXXXXXTAAGKLV 393
THP Y EMI DAI LKER GSSQ+AI KFIEEKQK+L G F+ AAGKLV
Sbjct: 55 THPPYEEMIKDAIVTLKERTGSSQYAIAKFIEEKQKNLPGNFKKLLLVHLKKLVAAGKLV 114
Query: 394 KIKNSYKLPSTRS 432
K+K SYKLPS RS
Sbjct: 115 KVKASYKLPSARS 127
>XP_016699758.1 PREDICTED: histone H1-like [Gossypium hirsutum]
Length = 280
Score = 90.1 bits (222), Expect = 1e-16
Identities = 47/73 (64%), Positives = 51/73 (69%)
Frame = +1
Query: 214 THPSYLEMITDAITALKERNGSSQFAIQKFIEEKQKHLSGAFRXXXXXXXXXXTAAGKLV 393
THP Y EMI DAI LKER GSSQ+AI KFIEEKQK+L G F+ AAGKLV
Sbjct: 55 THPPYEEMIKDAIVTLKERTGSSQYAIAKFIEEKQKNLPGNFKKLLLVHLKKLVAAGKLV 114
Query: 394 KIKNSYKLPSTRS 432
K+K SYKLPS RS
Sbjct: 115 KVKASYKLPSARS 127
>XP_016675067.1 PREDICTED: histone H1-like [Gossypium hirsutum] XP_017626599.1
PREDICTED: histone H1-like [Gossypium arboreum]
KHG19938.1 Histone H1 [Gossypium arboreum]
Length = 280
Score = 90.1 bits (222), Expect = 1e-16
Identities = 47/73 (64%), Positives = 51/73 (69%)
Frame = +1
Query: 214 THPSYLEMITDAITALKERNGSSQFAIQKFIEEKQKHLSGAFRXXXXXXXXXXTAAGKLV 393
THP Y EMI DAI LKER GSSQ+AI KFIEEKQK+L G F+ AAGKLV
Sbjct: 55 THPPYEEMIKDAIVTLKERTGSSQYAIAKFIEEKQKNLPGNFKKLLLVHLKKLVAAGKLV 114
Query: 394 KIKNSYKLPSTRS 432
K+K SYKLPS RS
Sbjct: 115 KVKASYKLPSARS 127
>XP_012473819.1 PREDICTED: histone H1-like isoform X1 [Gossypium raimondii]
KJB22924.1 hypothetical protein B456_004G074200
[Gossypium raimondii]
Length = 286
Score = 90.1 bits (222), Expect = 1e-16
Identities = 47/73 (64%), Positives = 51/73 (69%)
Frame = +1
Query: 214 THPSYLEMITDAITALKERNGSSQFAIQKFIEEKQKHLSGAFRXXXXXXXXXXTAAGKLV 393
THP Y EMI DAI LKER GSSQ+AI KFIEEKQK+L G F+ AAGKLV
Sbjct: 55 THPPYEEMIKDAIVTLKERTGSSQYAIAKFIEEKQKNLPGNFKKLLLVHLKKLVAAGKLV 114
Query: 394 KIKNSYKLPSTRS 432
K+K SYKLPS RS
Sbjct: 115 KVKASYKLPSARS 127
>OAY44265.1 hypothetical protein MANES_08G136300 [Manihot esculenta]
Length = 235
Score = 89.0 bits (219), Expect = 1e-16
Identities = 46/72 (63%), Positives = 51/72 (70%)
Frame = +1
Query: 217 HPSYLEMITDAITALKERNGSSQFAIQKFIEEKQKHLSGAFRXXXXXXXXXXTAAGKLVK 396
+PS+LEMITDAI +KER GSSQ AI KFIEEKQK L FR A+GKLVK
Sbjct: 51 YPSFLEMITDAIATMKERTGSSQHAITKFIEEKQKKLPSNFRKLLLVQLKRLVASGKLVK 110
Query: 397 IKNSYKLPSTRS 432
+KNSYKLP TRS
Sbjct: 111 VKNSYKLPPTRS 122
>XP_013722567.1 PREDICTED: histone H1.2-like [Brassica napus] CDX97804.1
BnaC04g41350D [Brassica napus]
Length = 272
Score = 89.7 bits (221), Expect = 1e-16
Identities = 58/135 (42%), Positives = 71/135 (52%), Gaps = 2/135 (1%)
Frame = +1
Query: 34 AVEESILPTEVAEDSIPTPASELPEEKPAAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXX 213
+ EE +P V E+++ PASE +KPAA+
Sbjct: 2 SAEEETVPINV-EETVTAPASE---KKPAAKGGKAKKTKEVKAAAAPKKKPAAKSPRKRT 57
Query: 214 T--HPSYLEMITDAITALKERNGSSQFAIQKFIEEKQKHLSGAFRXXXXXXXXXXTAAGK 387
+ HP+Y EMI DAIT LKER GSSQ+AIQKFIEEKQK L FR A GK
Sbjct: 58 SSSHPTYEEMIKDAITTLKERTGSSQYAIQKFIEEKQKSLPPTFRKLLLVNLKRLVALGK 117
Query: 388 LVKIKNSYKLPSTRS 432
LVK+K S+KLPS +S
Sbjct: 118 LVKVKGSFKLPSAKS 132
>KJB42223.1 hypothetical protein B456_007G143000 [Gossypium raimondii]
Length = 256
Score = 89.0 bits (219), Expect = 2e-16
Identities = 54/123 (43%), Positives = 62/123 (50%)
Frame = +1
Query: 64 VAEDSIPTPASELPEEKPAAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHPSYLEMIT 243
VA +S P PA E P E A HP Y EM+
Sbjct: 8 VAVESAPEPAEENPAEATA---NPKSGKAKKAKEPKAKKAAAPRKPRAPPAHPPYEEMVK 64
Query: 244 DAITALKERNGSSQFAIQKFIEEKQKHLSGAFRXXXXXXXXXXTAAGKLVKIKNSYKLPS 423
DAI LKE+ GSSQ+AI KFIEEKQK+L G F+ AAGKLVK+KNSYKLPS
Sbjct: 65 DAIVTLKEKTGSSQYAITKFIEEKQKNLPGNFKKLLLFHLKKLVAAGKLVKVKNSYKLPS 124
Query: 424 TRS 432
+S
Sbjct: 125 AKS 127
>ACU21235.1 unknown, partial [Glycine max]
Length = 164
Score = 86.3 bits (212), Expect = 2e-16
Identities = 46/72 (63%), Positives = 49/72 (68%)
Frame = +1
Query: 214 THPSYLEMITDAITALKERNGSSQFAIQKFIEEKQKHLSGAFRXXXXXXXXXXTAAGKLV 393
THPSY EMI DAIT+LKER GSSQ AI KFIEEK K L FR AAGKLV
Sbjct: 54 THPSYEEMIKDAITSLKERTGSSQHAIAKFIEEKHKQLPPNFRKLLLYHLKKLVAAGKLV 113
Query: 394 KIKNSYKLPSTR 429
K+K S+KLP TR
Sbjct: 114 KVKGSFKLPPTR 125