BLASTX nr result
ID: Panax24_contig00001457
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00001457
(608 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YP_009338364.1 ribosomal protein L20 (chloroplast) [Peucedanum i... 57 5e-07
ANS72053.1 ribosomal protein L20 (chloroplast) [Glehnia littoralis] 57 5e-07
YP_009243589.1 ribosomal protein L20 (chloroplast) [Coriandrum s... 57 5e-07
YP_009186276.1 ribosomal protein L20 (chloroplast) [Ostericum gr... 57 5e-07
AKZ23579.1 ribosomal protein L20 (plastid) [Conium maculatum] 57 5e-07
AKZ23578.1 ribosomal protein L20 (plastid) [Cicuta maculata] 57 5e-07
YP_086989.1 ribosomal protein L20 [Panax ginseng] YP_009121196.1... 57 5e-07
YP_009155235.1 ribosomal protein L20 (plastid) [Pastinaca pimpin... 57 5e-07
YP_740140.1 ribosomal protein L20 (chloroplast) [Daucus carota] ... 57 5e-07
YP_003359382.1 ribosomal protein L20 (chloroplast) [Olea europae... 55 1e-06
YP_004564027.1 ribosomal protein L20 [Olea woodiana subsp. woodi... 55 1e-06
YP_009309897.1 ribosomal protein L20 (chloroplast) [Abeliophyllu... 55 2e-06
ADK89886.1 ribosomal protein L20 (chloroplast) [Crithmum maritimum] 54 4e-06
ADK89801.1 ribosomal protein L20 (chloroplast) [Tiedemannia fili... 54 4e-06
YP_009235987.1 ribosomal protein L20 (chloroplast) [Anethum grav... 54 4e-06
YP_009245696.1 ribosomal protein L20 (chloroplast) [Carum carvi]... 54 5e-06
YP_009155317.1 ribosomal protein L20 (plastid) [Seseli montanum]... 54 5e-06
YP_009338280.1 ribosomal protein L20 (chloroplast) [Pleurospermu... 54 7e-06
YP_008814879.1 ribosomal protein L20 (chloroplast) [Aralia undul... 54 7e-06
>YP_009338364.1 ribosomal protein L20 (chloroplast) [Peucedanum insolens]
ANK36459.1 ribosomal protein L20 (chloroplast)
[Peucedanum insolens]
Length = 128
Score = 56.6 bits (135), Expect = 5e-07
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +1
Query: 193 LSNKNCLYIISNEIIKEVDWKESTGII 273
+SNKNCLY+ISNEIIKEVDWKESTGII
Sbjct: 102 ISNKNCLYMISNEIIKEVDWKESTGII 128
>ANS72053.1 ribosomal protein L20 (chloroplast) [Glehnia littoralis]
Length = 128
Score = 56.6 bits (135), Expect = 5e-07
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +1
Query: 193 LSNKNCLYIISNEIIKEVDWKESTGII 273
+SNKNCLY+ISNEIIKEVDWKESTGII
Sbjct: 102 ISNKNCLYMISNEIIKEVDWKESTGII 128
>YP_009243589.1 ribosomal protein L20 (chloroplast) [Coriandrum sativum] AKS03639.1
ribosomal protein L20 (chloroplast) [Coriandrum sativum]
Length = 128
Score = 56.6 bits (135), Expect = 5e-07
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +1
Query: 193 LSNKNCLYIISNEIIKEVDWKESTGII 273
+SNKNCLY+ISNEIIKEVDWKESTGII
Sbjct: 102 ISNKNCLYMISNEIIKEVDWKESTGII 128
>YP_009186276.1 ribosomal protein L20 (chloroplast) [Ostericum grosseserratum]
YP_009232767.1 ribosomal protein L20 (chloroplast)
[Angelica acutiloba] YP_009232852.1 ribosomal protein
L20 (chloroplast) [Angelica dahurica] YP_009232937.1
ribosomal protein L20 (chloroplast) [Angelica gigas]
YP_009331720.1 ribosomal protein L20 (chloroplast)
[Arracacia xanthorrhiza] AKZ23580.1 ribosomal protein
L20 (plastid) [Zizia aurea] ALN96854.1 ribosomal protein
L20 (chloroplast) [Angelica decursiva] ALO71631.1
ribosomal protein L20 (chloroplast) [Ostericum
grosseserratum] AMA97841.1 ribosomal protein L20
(chloroplast) [Angelica acutiloba] AMA97927.1 ribosomal
protein L20 (chloroplast) [Angelica dahurica] AMA98012.1
ribosomal protein L20 (chloroplast) [Angelica gigas]
APH07288.1 ribosomal protein L20 (chloroplast)
[Arracacia xanthorrhiza]
Length = 128
Score = 56.6 bits (135), Expect = 5e-07
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +1
Query: 193 LSNKNCLYIISNEIIKEVDWKESTGII 273
+SNKNCLY+ISNEIIKEVDWKESTGII
Sbjct: 102 ISNKNCLYMISNEIIKEVDWKESTGII 128
>AKZ23579.1 ribosomal protein L20 (plastid) [Conium maculatum]
Length = 128
Score = 56.6 bits (135), Expect = 5e-07
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +1
Query: 193 LSNKNCLYIISNEIIKEVDWKESTGII 273
+SNKNCLY+ISNEIIKEVDWKESTGII
Sbjct: 102 ISNKNCLYMISNEIIKEVDWKESTGII 128
>AKZ23578.1 ribosomal protein L20 (plastid) [Cicuta maculata]
Length = 128
Score = 56.6 bits (135), Expect = 5e-07
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +1
Query: 193 LSNKNCLYIISNEIIKEVDWKESTGII 273
+SNKNCLY+ISNEIIKEVDWKESTGII
Sbjct: 102 ISNKNCLYMISNEIIKEVDWKESTGII 128
>YP_086989.1 ribosomal protein L20 [Panax ginseng] YP_009121196.1 ribosomal
protein L20 (chloroplast) [Panax notoginseng]
YP_009155451.1 ribosomal protein L20 (chloroplast)
[Panax quinquefolius] YP_009191876.1 ribosomal protein
L20 (chloroplast) [Panax japonicus] YP_009191963.1
ribosomal protein L20 (chloroplast) [Panax vietnamensis]
YP_009266541.1 ribosomal protein L20 (chloroplast)
[Panax stipuleanatus] Q68RY3.1 RecName: Full=50S
ribosomal protein L20, chloroplastic AAT98532.1
ribosomal protein L20 (chloroplast) [Panax ginseng]
AGM15007.1 ribosomal protein L20 (chloroplast) [Panax
ginseng] AGM15093.1 ribosomal protein L20 (chloroplast)
[Panax ginseng] AGM15179.1 ribosomal protein L20
(chloroplast) [Panax ginseng] AGW31939.1 ribosomal
protein L20 (chloroplast) [Panax ginseng] AIA24350.1
ribosomal protein L20 (chloroplast) [Panax notoginseng]
AIX97912.1 ribosomal protein L20 (chloroplast) [Panax
ginseng] AIX97999.1 ribosomal protein L20 (chloroplast)
[Panax ginseng] AIX98082.1 ribosomal protein L20
(chloroplast) [Panax ginseng] AIX98167.1 ribosomal
protein L20 (chloroplast) [Panax ginseng] AIX98252.1
ribosomal protein L20 (chloroplast) [Panax ginseng]
AIX98337.1 ribosomal protein L20 (chloroplast) [Panax
ginseng] AIX98422.1 ribosomal protein L20 (chloroplast)
[Panax ginseng] AIX98507.1 ribosomal protein L20
(chloroplast) [Panax ginseng] AIX98592.1 ribosomal
protein L20 (chloroplast) [Panax ginseng] AJC99511.1
ribosomal protein L20 (chloroplast) [Panax
quinquefolius] AJC99596.1 ribosomal protein L20
(chloroplast) [Panax ginseng] AJC99681.1 ribosomal
protein L20 (chloroplast) [Panax ginseng] AKB99095.1
ribosomal protein L20 (chloroplast) [Panax notoginseng]
AKB99182.1 ribosomal protein L20 (chloroplast) [Panax
japonicus] AKB99269.1 ribosomal protein L20
(chloroplast) [Panax vietnamensis] AKB99356.1 ribosomal
protein L20 (chloroplast) [Panax vietnamensis]
AKG26623.1 ribosomal protein L20 (chloroplast) [Panax
notoginseng] AKU70798.1 ribosomal protein L20
(chloroplast) [Panax notoginseng] AKZ29769.1 ribosomal
protein L20 (chloroplast) [Panax quinquefolius]
AMR97472.1 ribosomal protein L20 (chloroplast) [Panax
vietnamensis] ANK78353.1 ribosomal protein L20
(chloroplast) [Panax japonicus var. bipinnatifidus]
ANK78439.1 ribosomal protein L20 (chloroplast) [Panax
stipuleanatus]
Length = 128
Score = 56.6 bits (135), Expect = 5e-07
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +1
Query: 193 LSNKNCLYIISNEIIKEVDWKESTGII 273
+SNKNCLY+ISNEIIKEVDWKESTGII
Sbjct: 102 ISNKNCLYMISNEIIKEVDWKESTGII 128
>YP_009155235.1 ribosomal protein L20 (plastid) [Pastinaca pimpinellifolia]
YP_009233022.1 ribosomal protein L20 (chloroplast)
[Ligusticum tenuissimum] YP_009235902.1 ribosomal
protein L20 (chloroplast) [Foeniculum vulgare]
YP_009338449.1 ribosomal protein L20 (chloroplast)
[Pterygopleurum neurophyllum] ADK89974.1 ribosomal
protein L20 (chloroplast) [Petroselinum crispum]
AIU99043.1 ribosomal protein L20 (plastid) [Pastinaca
pimpinellifolia] AMA98097.1 ribosomal protein L20
(chloroplast) [Ligusticum tenuissimum] AMD83938.1
ribosomal protein L20 (chloroplast) [Foeniculum vulgare]
ANK36544.1 ribosomal protein L20 (chloroplast)
[Pterygopleurum neurophyllum]
Length = 128
Score = 56.6 bits (135), Expect = 5e-07
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +1
Query: 193 LSNKNCLYIISNEIIKEVDWKESTGII 273
+SNKNCLY+ISNEIIKEVDWKESTGII
Sbjct: 102 ISNKNCLYMISNEIIKEVDWKESTGII 128
>YP_740140.1 ribosomal protein L20 (chloroplast) [Daucus carota] Q0G9T9.1
RecName: Full=50S ribosomal protein L20, chloroplastic
ABI32447.1 ribosomal protein L20 (chloroplast) [Daucus
carota] KZM81245.1 ribosomal protein L20 (plastid)
[Daucus carota subsp. sativus]
Length = 128
Score = 56.6 bits (135), Expect = 5e-07
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +1
Query: 193 LSNKNCLYIISNEIIKEVDWKESTGII 273
+SNKNCLY+ISNEIIKEVDWKESTGII
Sbjct: 102 ISNKNCLYMISNEIIKEVDWKESTGII 128
>YP_003359382.1 ribosomal protein L20 (chloroplast) [Olea europaea] YP_004376444.1
ribosomal protein L20 [Olea europaea subsp. europaea]
YP_004563804.1 ribosomal protein L20 [Olea europaea
subsp. cuspidata] YP_004564520.1 ribosomal protein L20
[Olea europaea subsp. maroccana] ABG74754.1 ribosomal
protein L20 (chloroplast) [Forsythia europaea]
ADA69949.1 ribosomal protein L20 (chloroplast) [Olea
europaea] ADD72112.1 ribosomal protein L20 (chloroplast)
[Olea europaea] CBR30338.1 ribosomal protein L20
(plastid) [Olea europaea subsp. europaea] CBR23853.1
ribosomal protein L20 (chloroplast) [Olea europaea
subsp. cuspidata] CBR24646.1 ribosomal protein L20
(chloroplast) [Olea europaea subsp. europaea] CBR30430.1
ribosomal protein L20 (plastid) [Olea europaea subsp.
europaea] CBS29265.1 ribosomal protein L20 (chloroplast)
[Olea europaea subsp. maroccana] CBJ04321.1 ribosomal
protein L20 (chloroplast) [Olea europaea subsp.
cuspidata] CBR23762.1 ribosomal protein L20
(chloroplast) [Olea europaea subsp. cuspidata]
CCQ09125.1 ribosomal protein L20 (chloroplast) [Olea
europaea subsp. europaea]
Length = 128
Score = 55.5 bits (132), Expect = 1e-06
Identities = 24/27 (88%), Positives = 27/27 (100%)
Frame = +1
Query: 193 LSNKNCLYIISNEIIKEVDWKESTGII 273
+SN+NCLY+ISNEIIKEVDWKESTGII
Sbjct: 102 ISNRNCLYMISNEIIKEVDWKESTGII 128
>YP_004564027.1 ribosomal protein L20 [Olea woodiana subsp. woodiana]
YP_009110625.1 ribosomal protein L20 (chloroplast)
[Hesperelaea palmeri] ABG74807.1 ribosomal protein L20
(chloroplast) [Jasminum abyssinicum] CBS29375.1
ribosomal protein L20 (chloroplast) [Olea woodiana
subsp. woodiana] CED79785.1 ribosomal protein L20
(chloroplast) [Hesperelaea palmeri]
Length = 128
Score = 55.5 bits (132), Expect = 1e-06
Identities = 24/27 (88%), Positives = 27/27 (100%)
Frame = +1
Query: 193 LSNKNCLYIISNEIIKEVDWKESTGII 273
+SN+NCLY+ISNEIIKEVDWKESTGII
Sbjct: 102 ISNRNCLYMISNEIIKEVDWKESTGII 128
>YP_009309897.1 ribosomal protein L20 (chloroplast) [Abeliophyllum distichum]
ALZ50040.1 ribosomal protein L20 (chloroplast)
[Abeliophyllum distichum]
Length = 128
Score = 55.1 bits (131), Expect = 2e-06
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +1
Query: 193 LSNKNCLYIISNEIIKEVDWKESTGII 273
+SNKNC Y+ISNEIIKEVDWKESTGII
Sbjct: 102 ISNKNCFYMISNEIIKEVDWKESTGII 128
>ADK89886.1 ribosomal protein L20 (chloroplast) [Crithmum maritimum]
Length = 128
Score = 54.3 bits (129), Expect = 4e-06
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +1
Query: 193 LSNKNCLYIISNEIIKEVDWKESTGII 273
+SNKNCLY+ISNEIIKEVDWKES GII
Sbjct: 102 ISNKNCLYMISNEIIKEVDWKESIGII 128
>ADK89801.1 ribosomal protein L20 (chloroplast) [Tiedemannia filiformis subsp.
greenmannii]
Length = 128
Score = 54.3 bits (129), Expect = 4e-06
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +1
Query: 193 LSNKNCLYIISNEIIKEVDWKESTGII 273
+SNKNCLY+I NEIIKEVDWKESTGII
Sbjct: 102 ISNKNCLYMIYNEIIKEVDWKESTGII 128
>YP_009235987.1 ribosomal protein L20 (chloroplast) [Anethum graveolens] ABU85165.1
ribosomal protein L20, partial (chloroplast) [Anethum
graveolens] AMD84023.1 ribosomal protein L20
(chloroplast) [Anethum graveolens]
Length = 128
Score = 54.3 bits (129), Expect = 4e-06
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +1
Query: 193 LSNKNCLYIISNEIIKEVDWKESTGII 273
+SNKNCLY+ISNEIIKEVDWKE TGII
Sbjct: 102 ISNKNCLYMISNEIIKEVDWKEFTGII 128
>YP_009245696.1 ribosomal protein L20 (chloroplast) [Carum carvi] AKS28711.1
ribosomal protein L20 (chloroplast) [Carum carvi]
Length = 128
Score = 53.9 bits (128), Expect = 5e-06
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +1
Query: 193 LSNKNCLYIISNEIIKEVDWKESTGII 273
+SNKNCLY+ISNEI KEVDWKESTGII
Sbjct: 102 ISNKNCLYMISNEIKKEVDWKESTGII 128
>YP_009155317.1 ribosomal protein L20 (plastid) [Seseli montanum] AIU99125.1
ribosomal protein L20 (plastid) [Seseli montanum]
ANS72137.1 ribosomal protein L20 (chloroplast)
[Ledebouriella seseloides]
Length = 128
Score = 53.9 bits (128), Expect = 5e-06
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +1
Query: 193 LSNKNCLYIISNEIIKEVDWKESTGII 273
+SNKNCLY+ISNEIIKEV WKESTGII
Sbjct: 102 ISNKNCLYMISNEIIKEVHWKESTGII 128
>YP_009338280.1 ribosomal protein L20 (chloroplast) [Pleurospermum camtschaticum]
ANK36375.1 ribosomal protein L20 (chloroplast)
[Pleurospermum camtschaticum]
Length = 128
Score = 53.5 bits (127), Expect = 7e-06
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +1
Query: 193 LSNKNCLYIISNEIIKEVDWKESTGII 273
+SN NCLY+ISNEIIKEVDWKESTGII
Sbjct: 102 ISNINCLYMISNEIIKEVDWKESTGII 128
>YP_008814879.1 ribosomal protein L20 (chloroplast) [Aralia undulata] AGG38979.1
ribosomal protein L20 (chloroplast) [Aralia undulata]
ANS71966.1 ribosomal protein L20 (chloroplast) [Aralia
elata]
Length = 128
Score = 53.5 bits (127), Expect = 7e-06
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +1
Query: 193 LSNKNCLYIISNEIIKEVDWKESTGII 273
+SN NCLY+ISNEIIKEVDWKESTGII
Sbjct: 102 ISNINCLYMISNEIIKEVDWKESTGII 128