BLASTX nr result
ID: Panax24_contig00001397
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00001397
(597 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ALH06361.1 D1/32 kD photosystem II reaction center protein, part... 71 5e-13
AAQ91580.1 photosystem II reaction center protein D1, partial (c... 70 1e-12
ACW20306.1 photosystem II protein D1, partial [Nostoc flagellifo... 70 2e-12
AJO70615.1 protein D1, partial [uncultured cyanophage] 74 2e-12
BAH23188.1 D1 protein, partial [uncultured cyanophage] 74 2e-12
AOS58669.1 PsbA, partial (chloroplast) [Encephalartos caffer] 74 2e-12
ACU12344.1 D1/32 kD photosystem II reaction center protein, part... 70 2e-12
CBL51910.1 psbA, partial [Synechococcus phage S-BM3] 71 2e-12
AHW52557.1 photosystem II D1 protein, partial [uncultured aquati... 73 2e-12
XP_010110758.1 Photosystem Q(B) protein [Morus notabilis] EXC280... 71 2e-12
ACU12338.1 D1/32 kD photosystem II reaction center protein, part... 70 2e-12
ACO91473.1 photosystem II D1 protein, partial [Cylindrospermopsi... 72 2e-12
ACO91472.1 photosystem II D1 protein, partial [Cylindrospermopsi... 72 2e-12
ACO91462.1 photosystem II D1 protein, partial [Raphidiopsis medi... 72 2e-12
ACO91461.1 photosystem II D1 protein, partial [Raphidiopsis medi... 72 2e-12
ACO91455.1 photosystem II D1 protein, partial [Raphidiopsis curv... 72 2e-12
AFZ40239.1 PsbA, partial (chloroplast) [Encephalartos gratus] 71 2e-12
KVI08399.1 Photosynthetic reaction centre, L/M, partial [Cynara ... 71 3e-12
AAG60680.1 PSII D1 protein (chloroplast) [Prunus sargentii] AAL1... 74 3e-12
AAL01434.1 PSII D1 protein (chloroplast) [Prunus serrulata var. ... 74 3e-12
>ALH06361.1 D1/32 kD photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06363.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06365.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06367.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06369.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06371.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06373.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06375.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06377.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06379.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06381.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06383.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06385.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06387.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06389.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06391.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06393.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06395.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06397.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06399.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06401.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06403.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06405.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06407.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06409.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06411.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06413.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06415.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06417.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06419.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06421.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06423.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06425.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06427.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06429.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06431.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06432.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06433.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06434.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06435.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06436.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06437.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06440.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06443.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06444.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06445.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06446.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06448.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06450.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06452.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia] ALH06454.1 D1/32 kD
photosystem II reaction center protein, partial
(chloroplast) [uncultured Trebouxia]
Length = 71
Score = 70.9 bits (172), Expect = 5e-13
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +1
Query: 373 LTISATFNLMIVFQAEQNIVMHPFHMLNIAGVFGGSLFSAI 495
L IS TFN MIVFQAE NI+MHPFHML +AGVFGGSLFSA+
Sbjct: 23 LGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAM 63
>AAQ91580.1 photosystem II reaction center protein D1, partial (chloroplast)
[Chlamydomonas sp. CCMP1619]
Length = 94
Score = 70.5 bits (171), Expect = 1e-12
Identities = 37/53 (69%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = +1
Query: 379 ISATFNLMIVFQAEQNIVMHPFHMLNIAGVFGGSLFSAI-VPWVTSRETRQLT 534
IS TFN MIVFQAE NI+MHPFHML +AGVFGGSLFSA+ VTS R+ T
Sbjct: 1 ISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETT 53
>ACW20306.1 photosystem II protein D1, partial [Nostoc flagelliforme str.
Sunitezuoqi]
Length = 78
Score = 69.7 bits (169), Expect = 2e-12
Identities = 37/55 (67%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = +1
Query: 373 LTISATFNLMIVFQAEQNIVMHPFHMLNIAGVFGGSLFSAI-VPWVTSRETRQLT 534
L IS TFN MIVFQAE NI+MHPFH L +AGVFGGSLFSA+ VTS R+ T
Sbjct: 21 LGISGTFNFMIVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLVRETT 75
>AJO70615.1 protein D1, partial [uncultured cyanophage]
Length = 264
Score = 73.9 bits (180), Expect = 2e-12
Identities = 39/58 (67%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Frame = +1
Query: 364 ATRLTISATFNLMIVFQAEQNIVMHPFHMLNIAGVFGGSLFSAI-VPWVTSRETRQLT 534
A L IS TFN M+VFQAE NI+MHPFHML +AGVFGGSLFSA+ P VTS R+ T
Sbjct: 105 AMPLGISGTFNYMLVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGPLVTSSLVRETT 162
>BAH23188.1 D1 protein, partial [uncultured cyanophage]
Length = 265
Score = 73.9 bits (180), Expect = 2e-12
Identities = 39/58 (67%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Frame = +1
Query: 364 ATRLTISATFNLMIVFQAEQNIVMHPFHMLNIAGVFGGSLFSAI-VPWVTSRETRQLT 534
A L IS TFN M+VFQAE NI+MHPFHML +AGVFGGSLFSA+ P VTS R+ T
Sbjct: 105 AMPLGISGTFNYMLVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGPLVTSSLVRETT 162
>AOS58669.1 PsbA, partial (chloroplast) [Encephalartos caffer]
Length = 271
Score = 73.9 bits (180), Expect = 2e-12
Identities = 38/55 (69%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Frame = +1
Query: 373 LTISATFNLMIVFQAEQNIVMHPFHMLNIAGVFGGSLFSAI-VPWVTSRETRQLT 534
L IS TFN MIVFQAE NI+MHPFHML +AGVFGGSLFSA+ WV S R+ T
Sbjct: 92 LGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSWVPSSLIRETT 146
>ACU12344.1 D1/32 kD photosystem II reaction center protein, partial
(chloroplast) [Trentepohlia annulata]
Length = 111
Score = 70.5 bits (171), Expect = 2e-12
Identities = 37/53 (69%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = +1
Query: 379 ISATFNLMIVFQAEQNIVMHPFHMLNIAGVFGGSLFSAI-VPWVTSRETRQLT 534
IS TFN MIVFQAE NI+MHPFHML +AGVFGGSLFSA+ VTS R+ T
Sbjct: 2 ISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETT 54
>CBL51910.1 psbA, partial [Synechococcus phage S-BM3]
Length = 126
Score = 70.9 bits (172), Expect = 2e-12
Identities = 38/58 (65%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Frame = +1
Query: 364 ATRLTISATFNLMIVFQAEQNIVMHPFHMLNIAGVFGGSLFSAI-VPWVTSRETRQLT 534
A L IS TFN M+VFQAE NI+MHPFHML +AGVFGGSLFSA+ VTS R+ T
Sbjct: 46 AMPLGISGTFNYMLVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETT 103
>AHW52557.1 photosystem II D1 protein, partial [uncultured aquatic phage]
Length = 227
Score = 73.2 bits (178), Expect = 2e-12
Identities = 39/58 (67%), Positives = 44/58 (75%), Gaps = 1/58 (1%)
Frame = +1
Query: 364 ATRLTISATFNLMIVFQAEQNIVMHPFHMLNIAGVFGGSLFSAI-VPWVTSRETRQLT 534
AT L IS TFN M+VFQAE NI+MHPFHML +AGVFGGSLFSA+ VTS R+ T
Sbjct: 96 ATPLGISGTFNYMLVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETT 153
>XP_010110758.1 Photosystem Q(B) protein [Morus notabilis] EXC28023.1 Photosystem
Q(B) protein [Morus notabilis]
Length = 141
Score = 71.2 bits (173), Expect = 2e-12
Identities = 38/55 (69%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Frame = +1
Query: 373 LTISATFNLMIVFQAEQNIVMHPFHMLNIAGVFGGSLFSAI-VPWVTSRETRQLT 534
L IS TFN MIVFQAE NI+MHPFHML +AGVFGGSLFSA+ VTS R+ T
Sbjct: 36 LGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETT 90
>ACU12338.1 D1/32 kD photosystem II reaction center protein, partial
(chloroplast) [Elliptochloris bilobata]
Length = 87
Score = 69.7 bits (169), Expect = 2e-12
Identities = 37/53 (69%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Frame = +1
Query: 379 ISATFNLMIVFQAEQNIVMHPFHMLNIAGVFGGSLFSAI-VPWVTSRETRQLT 534
IS TFN MIVFQAE NI MHPFHML +AGVFGGSLFSA+ VTS R+ T
Sbjct: 22 ISGTFNFMIVFQAEHNIFMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETT 74
>ACO91473.1 photosystem II D1 protein, partial [Cylindrospermopsis raciborskii
CHAB481]
Length = 162
Score = 71.6 bits (174), Expect = 2e-12
Identities = 38/55 (69%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Frame = +1
Query: 373 LTISATFNLMIVFQAEQNIVMHPFHMLNIAGVFGGSLFSAI-VPWVTSRETRQLT 534
L IS TFN MIVFQAE NI+MHPFHML +AGVFGGSLFSA+ VTS R+ T
Sbjct: 101 LGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETT 155
>ACO91472.1 photosystem II D1 protein, partial [Cylindrospermopsis raciborskii
CHAB482]
Length = 162
Score = 71.6 bits (174), Expect = 2e-12
Identities = 38/55 (69%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Frame = +1
Query: 373 LTISATFNLMIVFQAEQNIVMHPFHMLNIAGVFGGSLFSAI-VPWVTSRETRQLT 534
L IS TFN MIVFQAE NI+MHPFHML +AGVFGGSLFSA+ VTS R+ T
Sbjct: 101 LGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETT 155
>ACO91462.1 photosystem II D1 protein, partial [Raphidiopsis mediterranea
CHAB1350]
Length = 162
Score = 71.6 bits (174), Expect = 2e-12
Identities = 38/55 (69%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Frame = +1
Query: 373 LTISATFNLMIVFQAEQNIVMHPFHMLNIAGVFGGSLFSAI-VPWVTSRETRQLT 534
L IS TFN MIVFQAE NI+MHPFHML +AGVFGGSLFSA+ VTS R+ T
Sbjct: 101 LGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETT 155
>ACO91461.1 photosystem II D1 protein, partial [Raphidiopsis mediterranea
CHAB1353]
Length = 162
Score = 71.6 bits (174), Expect = 2e-12
Identities = 38/55 (69%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Frame = +1
Query: 373 LTISATFNLMIVFQAEQNIVMHPFHMLNIAGVFGGSLFSAI-VPWVTSRETRQLT 534
L IS TFN MIVFQAE NI+MHPFHML +AGVFGGSLFSA+ VTS R+ T
Sbjct: 101 LGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETT 155
>ACO91455.1 photosystem II D1 protein, partial [Raphidiopsis curvata CHAB114]
ACO91456.1 photosystem II D1 protein, partial
[Raphidiopsis curvata CHAB341] ACO91457.1 photosystem II
D1 protein, partial [Raphidiopsis curvata CHAB1150]
ACO91458.1 photosystem II D1 protein, partial
[Cylindrospermopsis raciborskii CHAB151] ACO91459.1
photosystem II D1 protein, partial [Cylindrospermopsis
raciborskii CHAB155] ACO91460.1 photosystem II D1
protein, partial [Raphidiopsis mediterranea CHAB352]
ACO91463.1 photosystem II D1 protein, partial
[Raphidiopsis mediterranea CHAB1355] ACO91464.1
photosystem II D1 protein, partial [Raphidiopsis
mediterranea CHAB3326] ACO91465.1 photosystem II D1
protein, partial [Raphidiopsis mediterranea CHAB2314]
ACO91466.1 photosystem II D1 protein, partial
[Cylindrospermopsis raciborskii CHAB2379] ACO91467.1
photosystem II D1 protein, partial [Cylindrospermopsis
raciborskii CHAB141] ACO91468.1 photosystem II D1
protein, partial [Cylindrospermopsis raciborskii
CHAB353] ACO91469.1 photosystem II D1 protein, partial
[Cylindrospermopsis raciborskii CHAB359] ACO91470.1
photosystem II D1 protein, partial [Cylindrospermopsis
raciborskii CHAB2380] ACO91471.1 photosystem II D1
protein, partial [Cylindrospermopsis raciborskii
CHAB1351] ACO91474.1 photosystem II D1 protein, partial
[Cylindrospermopsis raciborskii CHAB358]
Length = 162
Score = 71.6 bits (174), Expect = 2e-12
Identities = 38/55 (69%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Frame = +1
Query: 373 LTISATFNLMIVFQAEQNIVMHPFHMLNIAGVFGGSLFSAI-VPWVTSRETRQLT 534
L IS TFN MIVFQAE NI+MHPFHML +AGVFGGSLFSA+ VTS R+ T
Sbjct: 101 LGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETT 155
>AFZ40239.1 PsbA, partial (chloroplast) [Encephalartos gratus]
Length = 149
Score = 71.2 bits (173), Expect = 2e-12
Identities = 38/55 (69%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Frame = +1
Query: 373 LTISATFNLMIVFQAEQNIVMHPFHMLNIAGVFGGSLFSAI-VPWVTSRETRQLT 534
L IS TFN MIVFQAE NI+MHPFHML +AGVFGGSLFSA+ VTS R+ T
Sbjct: 90 LGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETT 144
>KVI08399.1 Photosynthetic reaction centre, L/M, partial [Cynara cardunculus
var. scolymus]
Length = 139
Score = 70.9 bits (172), Expect = 3e-12
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +1
Query: 373 LTISATFNLMIVFQAEQNIVMHPFHMLNIAGVFGGSLFSAI 495
L IS TFN MIVFQAE NI+MHPFHML +AGVFGGSLFSA+
Sbjct: 36 LGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAM 76
>AAG60680.1 PSII D1 protein (chloroplast) [Prunus sargentii] AAL10660.1 PSII D1
protein, partial (chloroplast) [Prunus sargentii]
Length = 353
Score = 74.3 bits (181), Expect = 3e-12
Identities = 39/55 (70%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Frame = +1
Query: 373 LTISATFNLMIVFQAEQNIVMHPFHMLNIAGVFGGSLFSAI-VPWVTSRETRQLT 534
L IS TFN MIVFQAE NI+MHPFHML +AGVFGGSLFSA+ P VTS R+ T
Sbjct: 174 LGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGPLVTSSLIRETT 228
>AAL01434.1 PSII D1 protein (chloroplast) [Prunus serrulata var. lannesiana]
AAL10662.1 PSII D1 protein, partial (chloroplast)
[Prunus serrulata var. lannesiana]
Length = 353
Score = 74.3 bits (181), Expect = 3e-12
Identities = 39/55 (70%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Frame = +1
Query: 373 LTISATFNLMIVFQAEQNIVMHPFHMLNIAGVFGGSLFSAI-VPWVTSRETRQLT 534
L IS TFN MIVFQAE NI+MHPFHML +AGVFGGSLFSA+ P VTS R+ T
Sbjct: 174 LGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGPLVTSSLIRETT 228