BLASTX nr result
ID: Panax24_contig00001347
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00001347
(967 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017235989.1 PREDICTED: protein RTF1 homolog [Daucus carota su... 281 2e-86
XP_019073959.1 PREDICTED: protein RTF1 homolog [Vitis vinifera] 240 1e-70
XP_017222797.1 PREDICTED: protein RTF1 homolog [Daucus carota su... 229 2e-66
XP_019170131.1 PREDICTED: protein RTF1 homolog [Ipomoea nil] XP_... 224 8e-65
OMO65136.1 Plus-3 [Corchorus olitorius] 224 1e-64
XP_007025691.2 PREDICTED: protein RTF1 homolog [Theobroma cacao]... 223 4e-64
OAY26146.1 hypothetical protein MANES_16G024900 [Manihot esculen... 223 4e-64
EOY28313.1 PAF1 complex component isoform 1 [Theobroma cacao] EO... 223 4e-64
XP_017221817.1 PREDICTED: protein RTF1 homolog [Daucus carota su... 222 7e-64
XP_012091565.1 PREDICTED: RNA polymerase-associated protein RTF1... 221 2e-63
OMO76468.1 Plus-3 [Corchorus capsularis] 220 4e-63
XP_015574623.1 PREDICTED: protein RTF1 homolog [Ricinus communis... 220 4e-63
XP_016726218.1 PREDICTED: LOW QUALITY PROTEIN: protein RTF1 homo... 218 2e-62
XP_018809088.1 PREDICTED: protein RTF1 homolog [Juglans regia] 218 2e-62
XP_008453742.1 PREDICTED: protein RTF1 homolog [Cucumis melo] XP... 218 5e-62
XP_004149150.1 PREDICTED: RNA polymerase-associated protein RTF1... 217 9e-62
XP_017649555.1 PREDICTED: protein RTF1 homolog [Gossypium arboreum] 217 9e-62
XP_015872019.1 PREDICTED: protein RTF1 homolog, partial [Ziziphu... 214 9e-61
XP_012455370.1 PREDICTED: RNA polymerase-associated protein RTF1... 214 9e-61
XP_011027887.1 PREDICTED: RNA polymerase-associated protein RTF1... 214 1e-60
>XP_017235989.1 PREDICTED: protein RTF1 homolog [Daucus carota subsp. sativus]
KZN07212.1 hypothetical protein DCAR_008049 [Daucus
carota subsp. sativus]
Length = 654
Score = 281 bits (719), Expect = 2e-86
Identities = 173/320 (54%), Positives = 185/320 (57%), Gaps = 3/320 (0%)
Frame = -3
Query: 953 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYASRKRS 774
MADLEKLLLEAAGRTG Y SRKR+
Sbjct: 1 MADLEKLLLEAAGRTGGSGRKRHSPPSPRRRRGGSYSDNGSDSREDDSDDDRGYGSRKRT 60
Query: 773 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYKDEDDRRKLAQMT 594
SSQVPLKKRL LYKD+DDR+KLAQMT
Sbjct: 61 SSQVPLKKRLDPLEREEHSSQEEGNDGYGREGDSDDDSIGSD---LYKDDDDRQKLAQMT 117
Query: 593 ELEREMILSERSTKITDKKMQEKLRKQKEKMTQSRKDSPPXXXXXXXXXXXXXXXXXXXX 414
ELEREMILSERSTKITDKKMQEKLRKQKEKM QSRKDS P
Sbjct: 118 ELEREMILSERSTKITDKKMQEKLRKQKEKMNQSRKDSRPHLSSRTSVRSSARSADRATA 177
Query: 413 XXA-LNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAIXXXXXXXXXX 237
LNELRAKRLRQQD D HR+L + +RGGSGSRRYSPVKRRSF A+
Sbjct: 178 KDDALNELRAKRLRQQDPDAHRRLGDSSRGGSGSRRYSPVKRRSFAPEAVSSSSQSGSGS 237
Query: 236 XXXXXXXXXXXXXXXXD--KTSPESTVPTFEDVKEITIRRSKLAKWLMEPFFDDLIVGCF 63
D KTSPEST+PTFED+K ITI+RSKLAKWLMEPFFDDLIVGCF
Sbjct: 238 GSEDEESTGDGRRGDSDYDKTSPESTIPTFEDIKAITIKRSKLAKWLMEPFFDDLIVGCF 297
Query: 62 VRVGIGKSRTGPMYRLCMVR 3
VRVGIGKSRTGP+YRLC+VR
Sbjct: 298 VRVGIGKSRTGPIYRLCVVR 317
>XP_019073959.1 PREDICTED: protein RTF1 homolog [Vitis vinifera]
Length = 658
Score = 240 bits (613), Expect = 1e-70
Identities = 149/321 (46%), Positives = 177/321 (55%), Gaps = 4/321 (1%)
Frame = -3
Query: 953 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYASRKRS 774
MADLE LLLEAAGRTG Y+SRK S
Sbjct: 1 MADLENLLLEAAGRTGTAGRNRHSLPPSRRRREGSYSDDGSDSKDDDSDEDRGYSSRKPS 60
Query: 773 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYKDEDDRRKLAQMT 594
SQVPLKKRL DLYK+EDDR++LAQ+T
Sbjct: 61 GSQVPLKKRLDPTERDDDHGSPEEGDDDGSDHEGDSSDDSDVGSDLYKNEDDRQQLAQLT 120
Query: 593 ELEREMILSERSTKITDKKMQEKLR-KQKEKMTQSRKDSPPXXXXXXXXXXXXXXXXXXX 417
ELEREMIL++R+TK TDKK+ EKLR K+ ++ TQSRK+SPP
Sbjct: 121 ELEREMILTDRATKKTDKKLHEKLRSKRGKEKTQSRKESPPLQLSRGVRSSARSADRAAA 180
Query: 416 XXXALNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAIXXXXXXXXXX 237
ALNELRAKRL+ QD + HRKL++ +RGGS +R +SPVKRR+FTAA++
Sbjct: 181 KDDALNELRAKRLKHQDPEAHRKLRDASRGGSSNRGFSPVKRRAFTAASLSSSSQSESDG 240
Query: 236 XXXXXXXXXXXXXXXXDKTSPE---STVPTFEDVKEITIRRSKLAKWLMEPFFDDLIVGC 66
D S VPTFED+K ITIRRSKLAKW MEPFF++LIVGC
Sbjct: 241 GSRSEDEGSTGDGAMVDSDDDRGIGSDVPTFEDIKSITIRRSKLAKWFMEPFFEELIVGC 300
Query: 65 FVRVGIGKSRTGPMYRLCMVR 3
FVRVGIGKSR+GP+YRLCMVR
Sbjct: 301 FVRVGIGKSRSGPIYRLCMVR 321
>XP_017222797.1 PREDICTED: protein RTF1 homolog [Daucus carota subsp. sativus]
KZN11443.1 hypothetical protein DCAR_004099 [Daucus
carota subsp. sativus]
Length = 651
Score = 229 bits (583), Expect = 2e-66
Identities = 147/317 (46%), Positives = 169/317 (53%), Gaps = 1/317 (0%)
Frame = -3
Query: 950 ADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYASRKRSS 771
ADLEKLLLEAAGRT + YA RKRS+
Sbjct: 4 ADLEKLLLEAAGRTDSSGKKRQSPPLSRRRREGSYFGNGSDSREDDSDDDRRYARRKRSA 63
Query: 770 SQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYKDEDDRRKLAQMTE 591
SQVPLKKRL LYKDEDD+RKLAQMTE
Sbjct: 64 SQVPLKKRLIEDARLRSREETDVGYNREGDSDDDSIGSD-----LYKDEDDKRKLAQMTE 118
Query: 590 LEREMILSERSTKITDKKMQEKLRKQKEKMTQSRKDSPPXXXXXXXXXXXXXXXXXXXXX 411
LEREMIL+ERSTKITD+KM+EKLR QKEKM QSR+ SPP
Sbjct: 119 LEREMILTERSTKITDRKMKEKLRMQKEKMNQSRESSPPHVSSRTGVRSSARYAHRAAAK 178
Query: 410 XA-LNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAIXXXXXXXXXXX 234
LNELRAKRLR +D + K+++ GS SRR+SPVK+R FTA A+
Sbjct: 179 GDALNELRAKRLRHKDLEAQWKVQDSTSVGSESRRFSPVKKRYFTATAVSSSSHSASVSR 238
Query: 233 XXXXXXXXXXXXXXXDKTSPESTVPTFEDVKEITIRRSKLAKWLMEPFFDDLIVGCFVRV 54
SP+S VPTFEDVK+ITI+RSKLA+W MEPFFDDLIVGCFVRV
Sbjct: 239 SEDDGSTGYGDSDDD-NISPDSAVPTFEDVKDITIQRSKLARWHMEPFFDDLIVGCFVRV 297
Query: 53 GIGKSRTGPMYRLCMVR 3
GIG+ MYRLC+V+
Sbjct: 298 GIGRWGNASMYRLCVVK 314
>XP_019170131.1 PREDICTED: protein RTF1 homolog [Ipomoea nil] XP_019170132.1
PREDICTED: protein RTF1 homolog [Ipomoea nil]
Length = 642
Score = 224 bits (572), Expect = 8e-65
Identities = 143/319 (44%), Positives = 174/319 (54%), Gaps = 2/319 (0%)
Frame = -3
Query: 953 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYASRKRS 774
MADL+ LLLEAAGRT ++RK S
Sbjct: 1 MADLDDLLLEAAGRTSGSGRSRHSPRHRRHHRDDGSDSRDDDSDDDRGY-----SNRKLS 55
Query: 773 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYKDEDDRRKLAQMT 594
SQVPLKKRL LYKDE+DRR+LAQ+T
Sbjct: 56 GSQVPLKKRLDPAERDDDHSDREGEDDGFGRERDSDDDSIGSD--LYKDENDRRELAQLT 113
Query: 593 ELEREMILSERSTKITDKKMQEKLRKQKEKMTQSRKDSPPXXXXXXXXXXXXXXXXXXXX 414
ELEREMIL++R+ K +DK+M +KLR K +Q+RK SPP
Sbjct: 114 ELEREMILTDRAAKRSDKQMHDKLRG---KSSQARKSSPPPTQSRGTRSSTRALGRAADR 170
Query: 413 XXALNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI--XXXXXXXXX 240
ALNE+RAKR RQQDS+T+ K ++ AR GSG+R YSPVKRR+FTAA +
Sbjct: 171 DGALNEIRAKRARQQDSETNWKTRDAARRGSGNRGYSPVKRRAFTAATLGSSPNRAESGS 230
Query: 239 XXXXXXXXXXXXXXXXXDKTSPESTVPTFEDVKEITIRRSKLAKWLMEPFFDDLIVGCFV 60
DKTSP+S +PT+E++KEITIRRSKLAKW MEPFFD+LIVGCFV
Sbjct: 231 QSDDGESGDEVMADSDDDKTSPDSKLPTYEEIKEITIRRSKLAKWFMEPFFDELIVGCFV 290
Query: 59 RVGIGKSRTGPMYRLCMVR 3
RVGIGKS++GP+YRLCMVR
Sbjct: 291 RVGIGKSKSGPIYRLCMVR 309
>OMO65136.1 Plus-3 [Corchorus olitorius]
Length = 656
Score = 224 bits (571), Expect = 1e-64
Identities = 143/325 (44%), Positives = 172/325 (52%), Gaps = 8/325 (2%)
Frame = -3
Query: 953 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYASRKRS 774
M DLE LLLEAAGRTG YASRK S
Sbjct: 1 MQDLENLLLEAAGRTGNGGRNRHSHPPSRRRREGSYSDGGSDSRDDDSDDDQGYASRKPS 60
Query: 773 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--LYKDEDDRRKLAQ 600
SQVPLKKRL LYK+EDDRR+LAQ
Sbjct: 61 GSQVPLKKRLDPAERDDDQGSQEEGDYDGGGSDRERDSSDDSDVGDDLYKNEDDRRQLAQ 120
Query: 599 MTELEREMILSERSTKITDKKMQEKLRKQKE--KMTQSRKDSPPXXXXXXXXXXXXXXXX 426
M+ELEREMILSER+ K DKK EK+R +++ + +SRK++PP
Sbjct: 121 MSELEREMILSERADKRGDKKFTEKIRSKRDNDRPNRSRKETPPLPSSRGVRSSARSADR 180
Query: 425 XXXXXXALNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAIXXXXXXX 246
ALNELRAKRL+QQD + HRKL++ +RGG+GSR SPVKR+SFTA+++
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGGTGSRGLSPVKRKSFTASSLSSSSQSE 240
Query: 245 XXXXXXXXXXXXXXXXXXXDKTSPEST----VPTFEDVKEITIRRSKLAKWLMEPFFDDL 78
D T PTFED+KEITIRRSKLAKW MEPFF++L
Sbjct: 241 SESRSNSEDEGSTGDGAMVDSDDDRGTRGPDGPTFEDIKEITIRRSKLAKWFMEPFFEEL 300
Query: 77 IVGCFVRVGIGKSRTGPMYRLCMVR 3
IVGCFVRVGIG+S++GP+YRLCMVR
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCMVR 325
>XP_007025691.2 PREDICTED: protein RTF1 homolog [Theobroma cacao] XP_007025692.2
PREDICTED: protein RTF1 homolog [Theobroma cacao]
Length = 660
Score = 223 bits (568), Expect = 4e-64
Identities = 142/325 (43%), Positives = 171/325 (52%), Gaps = 8/325 (2%)
Frame = -3
Query: 953 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYASRKRS 774
MADLE LLLEAAGRTG YASRK S
Sbjct: 1 MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60
Query: 773 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--LYKDEDDRRKLAQ 600
SQVPLKKRL LYK+EDDRRKLAQ
Sbjct: 61 GSQVPLKKRLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRRKLAQ 120
Query: 599 MTELEREMILSERSTKITDKKMQEKLRKQKE--KMTQSRKDSPPXXXXXXXXXXXXXXXX 426
MTELERE+ILSER+ K DKK EK+R ++E + ++SRK++PP
Sbjct: 121 MTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSSRGVRSSARSADR 180
Query: 425 XXXXXXALNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAIXXXXXXX 246
ALNELRAKRL+QQD + HRKL++ +RG SGSR SPVKR+ FTA+++
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSLSSSSQSD 240
Query: 245 XXXXXXXXXXXXXXXXXXXDKTSPESTV----PTFEDVKEITIRRSKLAKWLMEPFFDDL 78
D PTF+D+KEITIRRSKLAKW MEPFF++L
Sbjct: 241 SESRSNSEDEGSTGDGGMVDSDDDRGMQGPDGPTFDDIKEITIRRSKLAKWFMEPFFEEL 300
Query: 77 IVGCFVRVGIGKSRTGPMYRLCMVR 3
IVGC+VRVGIG+S++GP+YRLCMVR
Sbjct: 301 IVGCYVRVGIGRSKSGPIYRLCMVR 325
>OAY26146.1 hypothetical protein MANES_16G024900 [Manihot esculenta] OAY26147.1
hypothetical protein MANES_16G024900 [Manihot esculenta]
OAY26148.1 hypothetical protein MANES_16G024900 [Manihot
esculenta] OAY26149.1 hypothetical protein
MANES_16G024900 [Manihot esculenta] OAY26150.1
hypothetical protein MANES_16G024900 [Manihot esculenta]
Length = 660
Score = 223 bits (568), Expect = 4e-64
Identities = 142/323 (43%), Positives = 173/323 (53%), Gaps = 6/323 (1%)
Frame = -3
Query: 953 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYASRKRS 774
MADLE LLLEAAGRTGA YASRK S
Sbjct: 1 MADLENLLLEAAGRTGAAGRNRNALPSSRRRREGSYSDGGSDSRDDDSDDGRGYASRKPS 60
Query: 773 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--LYKDEDDRRKLAQ 600
SQVPLKKRL LYKDEDDRRKLAQ
Sbjct: 61 GSQVPLKKRLDPTERDDDQGSQDEGDYDDGGSDREGDSSDESDVGDDLYKDEDDRRKLAQ 120
Query: 599 MTELEREMILSERSTKITDKKMQEKLRKQK--EKMTQSRKDSPPXXXXXXXXXXXXXXXX 426
M+ELEREMILSER+ K D+ + E++R ++ EK T+SRK++PP
Sbjct: 121 MSELEREMILSERADKKGDRNLTERIRSKRDSEKPTRSRKETPPLPSSRGVRTSARSADR 180
Query: 425 XXXXXXALNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI--XXXXX 252
ALNELRAKRL+QQD + HRKL++V+RG S R SP+KR+ FT+A++
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGTSSGRGLSPMKRKHFTSASLSSSSSES 240
Query: 251 XXXXXXXXXXXXXXXXXXXXXDKTSPESTVPTFEDVKEITIRRSKLAKWLMEPFFDDLIV 72
D P S PTF+D+KEITIRRSKLAKW MEP+F++LIV
Sbjct: 241 DSRSHSEDEGSTGDGGMGDSDDDRDPGSEGPTFDDIKEITIRRSKLAKWFMEPWFEELIV 300
Query: 71 GCFVRVGIGKSRTGPMYRLCMVR 3
GCFVRVGIG+S++GP+YRLC+VR
Sbjct: 301 GCFVRVGIGRSKSGPIYRLCLVR 323
>EOY28313.1 PAF1 complex component isoform 1 [Theobroma cacao] EOY28314.1 PAF1
complex component isoform 1 [Theobroma cacao]
Length = 660
Score = 223 bits (568), Expect = 4e-64
Identities = 142/325 (43%), Positives = 171/325 (52%), Gaps = 8/325 (2%)
Frame = -3
Query: 953 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYASRKRS 774
MADLE LLLEAAGRTG YASRK S
Sbjct: 1 MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60
Query: 773 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--LYKDEDDRRKLAQ 600
SQVPLKKRL LYK+EDDRRKLAQ
Sbjct: 61 GSQVPLKKRLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRRKLAQ 120
Query: 599 MTELEREMILSERSTKITDKKMQEKLRKQKE--KMTQSRKDSPPXXXXXXXXXXXXXXXX 426
MTELERE+ILSER+ K DKK EK+R ++E + ++SRK++PP
Sbjct: 121 MTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSSRGVRSSARSADR 180
Query: 425 XXXXXXALNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAIXXXXXXX 246
ALNELRAKRL+QQD + HRKL++ +RG SGSR SPVKR+ FTA+++
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSLSSSSQSD 240
Query: 245 XXXXXXXXXXXXXXXXXXXDKTSPESTV----PTFEDVKEITIRRSKLAKWLMEPFFDDL 78
D PTF+D+KEITIRRSKLAKW MEPFF++L
Sbjct: 241 SESRSNSEDEGSTGDGGMVDSDDDRGMQGPDGPTFDDIKEITIRRSKLAKWFMEPFFEEL 300
Query: 77 IVGCFVRVGIGKSRTGPMYRLCMVR 3
IVGC+VRVGIG+S++GP+YRLCMVR
Sbjct: 301 IVGCYVRVGIGRSKSGPIYRLCMVR 325
>XP_017221817.1 PREDICTED: protein RTF1 homolog [Daucus carota subsp. sativus]
XP_017221825.1 PREDICTED: protein RTF1 homolog [Daucus
carota subsp. sativus] KZN11441.1 hypothetical protein
DCAR_004097 [Daucus carota subsp. sativus]
Length = 653
Score = 222 bits (566), Expect = 7e-64
Identities = 147/320 (45%), Positives = 167/320 (52%), Gaps = 3/320 (0%)
Frame = -3
Query: 953 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYASRKRS 774
MADLEKLLLEAAGRTG+ Y+SR RS
Sbjct: 1 MADLEKLLLEAAGRTGSSGRKRQSPPLSRRRREGSYSDNGSDSKEDDSDDDRRYSSRNRS 60
Query: 773 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYKDEDDRRKLAQMT 594
SSQVPLKKRL LYKDEDDR+KLA+MT
Sbjct: 61 SSQVPLKKRLSQLERDVGHRSREEGDVGYGREGDSDDDSIGSD--LYKDEDDRKKLAEMT 118
Query: 593 ELEREMILSERSTKITDKKMQEKLRKQKEKMTQSRKDSPPXXXXXXXXXXXXXXXXXXXX 414
ELEREMIL+ERSTK TD+KMQEKLR QKEKM QSRK SPP
Sbjct: 119 ELEREMILTERSTKKTDRKMQEKLRMQKEKMNQSRKISPPHVSSRTGVRSSARYADRAAA 178
Query: 413 XXA-LNELRAKRLRQQDSDTHRKLKEVARGG--SGSRRYSPVKRRSFTAAAIXXXXXXXX 243
LNELRAKRL+ QD + K + G S SRR+SPVK+R A+
Sbjct: 179 KGDALNELRAKRLKHQDLEARWKFNRDSTSGGTSESRRFSPVKKRFVPETAVSSSSQSAS 238
Query: 242 XXXXXXXXXXXXXXXXXXDKTSPESTVPTFEDVKEITIRRSKLAKWLMEPFFDDLIVGCF 63
TSP+S V FEDVKEITI+RSKLA+W MEPFFDDLIVGCF
Sbjct: 239 GSRSEDDGSTGYGDSDDD-NTSPKSAVLRFEDVKEITIQRSKLARWHMEPFFDDLIVGCF 297
Query: 62 VRVGIGKSRTGPMYRLCMVR 3
VRVGI ++R GP+YRLC+V+
Sbjct: 298 VRVGIARARNGPIYRLCVVK 317
>XP_012091565.1 PREDICTED: RNA polymerase-associated protein RTF1 homolog [Jatropha
curcas] KDP20938.1 hypothetical protein JCGZ_21409
[Jatropha curcas]
Length = 658
Score = 221 bits (563), Expect = 2e-63
Identities = 139/323 (43%), Positives = 174/323 (53%), Gaps = 6/323 (1%)
Frame = -3
Query: 953 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYASRKRS 774
MADLE LLLEAAGRTG+ YASRK S
Sbjct: 1 MADLENLLLEAAGRTGSSGRNRNAHPPSRRRREGSYSDGGSDSRDEDSDDDRGYASRKPS 60
Query: 773 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--LYKDEDDRRKLAQ 600
SQVPLKKRL LYKDEDDRRKLAQ
Sbjct: 61 GSQVPLKKRLDPAERDDDQGSQEEGGYDDGASDREGDSSDESDVGDDLYKDEDDRRKLAQ 120
Query: 599 MTELEREMILSERSTKITDKKMQEKLRKQK--EKMTQSRKDSPPXXXXXXXXXXXXXXXX 426
M+ELEREMILSER+ K DK + E++R ++ E+ T+SRK++PP
Sbjct: 121 MSELEREMILSERADKKGDKNLTERIRSKRDSERATRSRKETPPLPSSRGVRTSARSADR 180
Query: 425 XXXXXXALNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAIXXXXXXX 246
ALNELRAKRL+QQD + HRKL++V+RG SGSR SPV+R+ FT+A++
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGTSGSRGVSPVRRKRFTSASLSSSSSES 240
Query: 245 XXXXXXXXXXXXXXXXXXXDKTS--PESTVPTFEDVKEITIRRSKLAKWLMEPFFDDLIV 72
P S T++D++E+TIRRSKLAKWLMEP+F++LIV
Sbjct: 241 DSRSHSEDEASTGDGGMADSDEDREPGSEGLTYDDIREVTIRRSKLAKWLMEPWFEELIV 300
Query: 71 GCFVRVGIGKSRTGPMYRLCMVR 3
GCFVRVGIG+S++GP+YRLC+VR
Sbjct: 301 GCFVRVGIGRSKSGPIYRLCLVR 323
>OMO76468.1 Plus-3 [Corchorus capsularis]
Length = 659
Score = 220 bits (561), Expect = 4e-63
Identities = 142/325 (43%), Positives = 170/325 (52%), Gaps = 8/325 (2%)
Frame = -3
Query: 953 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYASRKRS 774
M DLE LLLEAAGRTG YASRK S
Sbjct: 1 MQDLENLLLEAAGRTGNGGRNRHSHPPSRRRREGSYSDGGSDSRDDDSDDDQGYASRKPS 60
Query: 773 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--LYKDEDDRRKLAQ 600
SQVPLKKRL LYK+EDDRR+LAQ
Sbjct: 61 GSQVPLKKRLDPAERDDDQGSQEEGDYDGGGSDRERDSSDDSDVGDDLYKNEDDRRQLAQ 120
Query: 599 MTELEREMILSERSTKITDKKMQEKLR--KQKEKMTQSRKDSPPXXXXXXXXXXXXXXXX 426
M+ELEREMILSER+ K DKK EK+R + K++ +SRK++PP
Sbjct: 121 MSELEREMILSERADKRGDKKFTEKIRSKRDKDRPNRSRKETPPLPSSRGVRSSARSADR 180
Query: 425 XXXXXXALNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAIXXXXXXX 246
ALNELRAKRL+QQD + RKL++ +RG +GSR SPVKR+SFTA+++
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEARRKLRDASRGSTGSRGLSPVKRKSFTASSLSSSSQSE 240
Query: 245 XXXXXXXXXXXXXXXXXXXDKTSPEST----VPTFEDVKEITIRRSKLAKWLMEPFFDDL 78
D T PTFED+KEITIRRSKLAKW MEPFF++L
Sbjct: 241 SESRSNSEDEGSTGDGAMVDSDDDRGTRGPDGPTFEDIKEITIRRSKLAKWFMEPFFEEL 300
Query: 77 IVGCFVRVGIGKSRTGPMYRLCMVR 3
IVGCFVRVGIG+S++GP+YRLCMVR
Sbjct: 301 IVGCFVRVGIGRSKSGPIYRLCMVR 325
>XP_015574623.1 PREDICTED: protein RTF1 homolog [Ricinus communis] EEF43239.1 RNA
polymerase-associated protein RTF1, putative [Ricinus
communis]
Length = 660
Score = 220 bits (561), Expect = 4e-63
Identities = 136/323 (42%), Positives = 173/323 (53%), Gaps = 6/323 (1%)
Frame = -3
Query: 953 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYASRKRS 774
MADLE LLLEAAGRTG Y+SRK S
Sbjct: 1 MADLENLLLEAAGRTGTSGRNRNALPPSRRRREGSYSDGGSDSRDDDSDDDRGYSSRKPS 60
Query: 773 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--LYKDEDDRRKLAQ 600
SQVPLKKRL LYK+EDDRRKLAQ
Sbjct: 61 GSQVPLKKRLDPTERDDDQGSQDEGDYDDGNSDREGDSSDGSDVGEDLYKNEDDRRKLAQ 120
Query: 599 MTELEREMILSERSTKITDKKMQEKLR--KQKEKMTQSRKDSPPXXXXXXXXXXXXXXXX 426
M+ELEREMILSER+ K DK + E++R ++ E+ T+SRK++PP
Sbjct: 121 MSELEREMILSERADKKGDKNLTERIRSKRESERTTRSRKETPPLPSSRGVRTSARSADR 180
Query: 425 XXXXXXALNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAIXXXXXXX 246
ALNEL+A+RL+QQD + HRKL++ +R GSGSR +SP+KR+ FT+A++
Sbjct: 181 AAAKDDALNELKARRLKQQDPEAHRKLRDASRRGSGSRGFSPIKRKRFTSASLSSSSSES 240
Query: 245 XXXXXXXXXXXXXXXXXXXDKTS--PESTVPTFEDVKEITIRRSKLAKWLMEPFFDDLIV 72
P S PTF+D++EITIRRSKLAKW MEP+F++LIV
Sbjct: 241 ESRSHSEDEGSTGDGGMADSDDDGEPGSQGPTFDDIREITIRRSKLAKWFMEPWFEELIV 300
Query: 71 GCFVRVGIGKSRTGPMYRLCMVR 3
GCFVRVGIG+S++GP+YRLC+VR
Sbjct: 301 GCFVRVGIGRSKSGPIYRLCLVR 323
>XP_016726218.1 PREDICTED: LOW QUALITY PROTEIN: protein RTF1 homolog [Gossypium
hirsutum]
Length = 657
Score = 218 bits (556), Expect = 2e-62
Identities = 140/325 (43%), Positives = 171/325 (52%), Gaps = 8/325 (2%)
Frame = -3
Query: 953 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYASRKRS 774
MADLE LLLEAAGRTG YASRK S
Sbjct: 1 MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60
Query: 773 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--LYKDEDDRRKLAQ 600
SQVPLKKRL LYK+E+DRR+LAQ
Sbjct: 61 GSQVPLKKRLDPAERDDDQGSQEEGDYNDAGSGRERDSSDESDVGDDLYKNEEDRRQLAQ 120
Query: 599 MTELEREMILSERSTKITDKKMQEKLRKQKE--KMTQSRKDSPPXXXXXXXXXXXXXXXX 426
+TELEREMILSER+ K DKK EK+R ++E + ++S++++PP
Sbjct: 121 LTELEREMILSERADKRGDKKFTEKIRSKRENDRPSRSQRETPPLPSSRGVRSSARSADR 180
Query: 425 XXXXXXALNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAIXXXXXXX 246
ALNELRAKRL+QQD + HRKL++ +RG SG+R SPVKR+ FTA+++
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGNRGLSPVKRKPFTASSLSSSSQSE 240
Query: 245 XXXXXXXXXXXXXXXXXXXDKTSPEST----VPTFEDVKEITIRRSKLAKWLMEPFFDDL 78
D T PTF D+KEITIRRSKLAKWLMEPFF++L
Sbjct: 241 SESRSNSEDEGSTGDGGMVDSEDERGTWGPNGPTFNDIKEITIRRSKLAKWLMEPFFEEL 300
Query: 77 IVGCFVRVGIGKSRTGPMYRLCMVR 3
IVGCFVRVGIG+S+TG +YRLCMVR
Sbjct: 301 IVGCFVRVGIGRSKTGAIYRLCMVR 325
>XP_018809088.1 PREDICTED: protein RTF1 homolog [Juglans regia]
Length = 659
Score = 218 bits (556), Expect = 2e-62
Identities = 143/324 (44%), Positives = 173/324 (53%), Gaps = 7/324 (2%)
Frame = -3
Query: 953 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYASRKRS 774
MADLE LLLEAAGRT + YASRK S
Sbjct: 1 MADLENLLLEAAGRTSSAGRNRNSRPPSRRRREGSYSDGGSDYRDDDSDDDRGYASRKPS 60
Query: 773 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD-LYKDEDDRRKLAQM 597
SQVPLKKRL D LYK+EDDRRKLAQM
Sbjct: 61 GSQVPLKKRLDPTERDDDLGSQEEGDDGGLSDREGDSSDESDVGDDLYKNEDDRRKLAQM 120
Query: 596 TELEREMILSERSTKITDKKMQEKLRKQKE--KMTQSRKDSPPXXXXXXXXXXXXXXXXX 423
TELEREMILS+R++K DK ++EK+R ++E K TQSRK++PP
Sbjct: 121 TELEREMILSDRASKKIDKNLREKIRSKRESGKTTQSRKETPP-LPSSRMRLSARSADRS 179
Query: 422 XXXXXALNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAIXXXXXXXX 243
ALNELRAKRL+QQD + HRKL++ RG SG R +SP KR++FT ++
Sbjct: 180 AAKDDALNELRAKRLKQQDPEAHRKLRDATRGSSGGRTFSP-KRKAFTRTSLSSSSQSES 238
Query: 242 XXXXXXXXXXXXXXXXXXDKTSPE----STVPTFEDVKEITIRRSKLAKWLMEPFFDDLI 75
D S VP+F+D+KEITIRRSKLAKW MEPFF++LI
Sbjct: 239 ESRSHSEDEGSTGDGAMVDSDEERGMLGSDVPSFDDIKEITIRRSKLAKWFMEPFFEELI 298
Query: 74 VGCFVRVGIGKSRTGPMYRLCMVR 3
VGCFVRVGIG+S++GP+YRLCMVR
Sbjct: 299 VGCFVRVGIGRSKSGPIYRLCMVR 322
>XP_008453742.1 PREDICTED: protein RTF1 homolog [Cucumis melo] XP_008453743.1
PREDICTED: protein RTF1 homolog [Cucumis melo]
Length = 660
Score = 218 bits (554), Expect = 5e-62
Identities = 140/325 (43%), Positives = 170/325 (52%), Gaps = 8/325 (2%)
Frame = -3
Query: 953 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYASRKRS 774
MADLE LLLEAAGRT A YASRK S
Sbjct: 1 MADLENLLLEAAGRTNAGGGNRHSHPPSRRQREGSYSDGGSDSRDDDSDDERGYASRKPS 60
Query: 773 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--LYKDEDDRRKLAQ 600
SQVPLKKRL LYKD+DDRRKLA
Sbjct: 61 GSQVPLKKRLDPTERDDDGGSPEEGEDEDVGSEHEGDSSDESDVGDDLYKDDDDRRKLAG 120
Query: 599 MTELEREMILSERSTKITDKKMQEKLRKQ--KEKMTQSRKDSPPXXXXXXXXXXXXXXXX 426
M+EL+REMILS+R++K DK + E LR + K K SRK++PP
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKTAPSRKETPPLPSSRIRSSARSADRA 180
Query: 425 XXXXXXALNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI----XXX 258
LNELRAKRL+QQD + HRKL++ +RG S +RR+SP KR+ FTA ++
Sbjct: 181 AAKDDA-LNELRAKRLKQQDPEAHRKLRDASRGNSNNRRFSPTKRKPFTAPSLSSSSQSE 239
Query: 257 XXXXXXXXXXXXXXXXXXXXXXXDKTSPESTVPTFEDVKEITIRRSKLAKWLMEPFFDDL 78
+++ P S PTFED+KEITIRRSKLAKWLMEPFF++L
Sbjct: 240 SESRFQSDDEGSTGDGGMIDSDDERSMPGSDGPTFEDIKEITIRRSKLAKWLMEPFFEEL 299
Query: 77 IVGCFVRVGIGKSRTGPMYRLCMVR 3
IVGCFVRVGIG+SR+GP+YRLC+VR
Sbjct: 300 IVGCFVRVGIGRSRSGPIYRLCLVR 324
>XP_004149150.1 PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
sativus] XP_011653135.1 PREDICTED: RNA
polymerase-associated protein RTF1 homolog [Cucumis
sativus] KGN53247.1 hypothetical protein Csa_4G038650
[Cucumis sativus]
Length = 660
Score = 217 bits (552), Expect = 9e-62
Identities = 139/325 (42%), Positives = 170/325 (52%), Gaps = 8/325 (2%)
Frame = -3
Query: 953 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYASRKRS 774
MADLE LLLEAAGRT A YASRK S
Sbjct: 1 MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60
Query: 773 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--LYKDEDDRRKLAQ 600
SQVPLKKRL LYKD+DDRRKLA
Sbjct: 61 GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120
Query: 599 MTELEREMILSERSTKITDKKMQEKLRKQ--KEKMTQSRKDSPPXXXXXXXXXXXXXXXX 426
M+EL+REMILS+R++K DK + E LR + K K SRK++PP
Sbjct: 121 MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180
Query: 425 XXXXXXALNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI----XXX 258
LNELRAKRL+QQD + HRKL++ +RG + SRR+SP KR+ FTA ++
Sbjct: 181 AAKDDA-LNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSE 239
Query: 257 XXXXXXXXXXXXXXXXXXXXXXXDKTSPESTVPTFEDVKEITIRRSKLAKWLMEPFFDDL 78
+++ P S PTFED+KE+TIRRSKLAKWLMEPFF++L
Sbjct: 240 SESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEEL 299
Query: 77 IVGCFVRVGIGKSRTGPMYRLCMVR 3
IVGCFVRVGIG+SR+GP+YRLC+VR
Sbjct: 300 IVGCFVRVGIGRSRSGPIYRLCLVR 324
>XP_017649555.1 PREDICTED: protein RTF1 homolog [Gossypium arboreum]
Length = 661
Score = 217 bits (552), Expect = 9e-62
Identities = 139/325 (42%), Positives = 170/325 (52%), Gaps = 8/325 (2%)
Frame = -3
Query: 953 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYASRKRS 774
MADLE LLLEAAGRTG YASRK S
Sbjct: 1 MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60
Query: 773 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--LYKDEDDRRKLAQ 600
SQVPLKKRL LYK+E+DRR+LAQ
Sbjct: 61 GSQVPLKKRLDPAERDDDQGSQEEGDYDDAGSGRERDSSDESDVGDDLYKNEEDRRQLAQ 120
Query: 599 MTELEREMILSERSTKITDKKMQEKLRKQKE--KMTQSRKDSPPXXXXXXXXXXXXXXXX 426
+TELEREMILSER+ K DKK EK+R ++E + ++S++++PP
Sbjct: 121 LTELEREMILSERADKRGDKKFTEKIRSKRENDRPSRSQRETPPLPSSRGVRSSARSADR 180
Query: 425 XXXXXXALNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAIXXXXXXX 246
ALNELRAKRL+QQD + HRKL++ +RG SG+R SPVKR+ FTA+++
Sbjct: 181 AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGNRGLSPVKRKPFTASSLSSSSQSE 240
Query: 245 XXXXXXXXXXXXXXXXXXXDKTSPEST----VPTFEDVKEITIRRSKLAKWLMEPFFDDL 78
D T PTF D+KEITIRRSKLAKW MEPFF++L
Sbjct: 241 SESRSNSEDEGSTGDGGMVDSEDERGTWGPNGPTFNDIKEITIRRSKLAKWFMEPFFEEL 300
Query: 77 IVGCFVRVGIGKSRTGPMYRLCMVR 3
IVGCFVRVGIG+S+TG +YRLCMVR
Sbjct: 301 IVGCFVRVGIGRSKTGAIYRLCMVR 325
>XP_015872019.1 PREDICTED: protein RTF1 homolog, partial [Ziziphus jujuba]
Length = 638
Score = 214 bits (544), Expect = 9e-61
Identities = 127/269 (47%), Positives = 158/269 (58%), Gaps = 6/269 (2%)
Frame = -3
Query: 791 ASRKRSSSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLYKDEDDRR 612
A RK S SQVPLKKRL DLYKDEDDRR
Sbjct: 38 AGRKPSGSQVPLKKRLDPAERDDDQGSEEEGDDDRGSDQEGDSDESDVGSDLYKDEDDRR 97
Query: 611 KLAQMTELEREMILSERSTKITDKKMQEKLRK--QKEKMTQSRKDSPPXXXXXXXXXXXX 438
KLA+MTEL+REMIL +R+TK D+ ++EKLR +K K TQSRK++PP
Sbjct: 98 KLAEMTELDREMILLDRATKKEDRNLKEKLRPKWEKGKTTQSRKETPP-LPSSRVRSSAR 156
Query: 437 XXXXXXXXXXALNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI--- 267
ALNELRAKRL+QQD + HRKL++ +RG SGSR +S R+SFTAA++
Sbjct: 157 SADRAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRSFSHTNRKSFTAASLSSS 216
Query: 266 -XXXXXXXXXXXXXXXXXXXXXXXXXXDKTSPESTVPTFEDVKEITIRRSKLAKWLMEPF 90
++ P S PTF+D++EITIRRSKLAKW+MEPF
Sbjct: 217 SQSESESGSGSEDEGSTGDGGMIDSDDERGMPGSEGPTFDDIREITIRRSKLAKWIMEPF 276
Query: 89 FDDLIVGCFVRVGIGKSRTGPMYRLCMVR 3
F++LIVGCFVRVGIG+S++GP+YRLCMVR
Sbjct: 277 FEELIVGCFVRVGIGRSKSGPIYRLCMVR 305
>XP_012455370.1 PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Gossypium raimondii] KJB69481.1 hypothetical protein
B456_011G025800 [Gossypium raimondii] KJB69482.1
hypothetical protein B456_011G025800 [Gossypium
raimondii] KJB69483.1 hypothetical protein
B456_011G025800 [Gossypium raimondii]
Length = 660
Score = 214 bits (545), Expect = 9e-61
Identities = 139/325 (42%), Positives = 170/325 (52%), Gaps = 8/325 (2%)
Frame = -3
Query: 953 MADLEKLLLEAAGRTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYASRKRS 774
MADLE LLLEAAGRTG YASRK S
Sbjct: 1 MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60
Query: 773 SSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--LYKDEDDRRKLAQ 600
SQVPLKKRL LYK+E+DRR+LAQ
Sbjct: 61 GSQVPLKKRLDPAERDDDQGSQEEGDYNDAGSGRERDSSDESDVGDDLYKNEEDRRQLAQ 120
Query: 599 MTELEREMILSERSTKITDKKMQEKLRKQKE--KMTQSRKDSPPXXXXXXXXXXXXXXXX 426
+TELEREMILSER+ K DKK EK+R ++E + ++S++++PP
Sbjct: 121 LTELEREMILSERADKRGDKKFTEKIRSKRENDRPSRSQRETPPLPSRGVRSSARSADRA 180
Query: 425 XXXXXXALNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAIXXXXXXX 246
LNELRAKRL+QQD + HRKL++ +RG SG+R SPVKR+ FTA+++
Sbjct: 181 AAKDDA-LNELRAKRLKQQDPEAHRKLRDASRGSSGNRGLSPVKRKPFTASSLSSSSQSE 239
Query: 245 XXXXXXXXXXXXXXXXXXXDKTSPEST----VPTFEDVKEITIRRSKLAKWLMEPFFDDL 78
D T PTF D+KEITIRRSKLAKWLMEPFF++L
Sbjct: 240 SESRSNSEDEGSTGDGGMVDSEDERGTWGPNGPTFNDIKEITIRRSKLAKWLMEPFFEEL 299
Query: 77 IVGCFVRVGIGKSRTGPMYRLCMVR 3
IVGCFVRVGIG+S+TG +YRLCMVR
Sbjct: 300 IVGCFVRVGIGRSKTGAIYRLCMVR 324
>XP_011027887.1 PREDICTED: RNA polymerase-associated protein RTF1 homolog [Populus
euphratica]
Length = 662
Score = 214 bits (544), Expect = 1e-60
Identities = 135/324 (41%), Positives = 174/324 (53%), Gaps = 7/324 (2%)
Frame = -3
Query: 953 MADLEKLLLEAAGRTG-AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYASRKR 777
MADLE LLLEAAGRTG + YA+RK
Sbjct: 1 MADLENLLLEAAGRTGKSGRNRNSILPSRRRKREGSYSDGGSDSRDDDSDDDRAYANRKP 60
Query: 776 SSSQVPLKKRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--LYKDEDDRRKLA 603
S SQVPLKKRL LYKDEDDR+KLA
Sbjct: 61 SGSQVPLKKRLETNERDEEEGSQDEGDYDGGGSDREGGSSDESDIGDDLYKDEDDRKKLA 120
Query: 602 QMTELEREMILSERSTKITDKKMQEKLR--KQKEKMTQSRKDSPPXXXXXXXXXXXXXXX 429
QM+EL+RE+IL++R+ K DK + EK+R + +K T+SRK++PP
Sbjct: 121 QMSELDRELILADRADKKGDKHLTEKIRLKRDNDKPTRSRKETPPLPSTRGVRSSARSAD 180
Query: 428 XXXXXXXALNELRAKRLRQQDSDTHRKLKEVARGGSGSRRYSPVKRRSFTAAAI--XXXX 255
ALNELRAKRL+QQD + HRKL++V+RG +GSR +S VK+ +FT+A++
Sbjct: 181 RAAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGSAGSRGFSQVKKNNFTSASLSSSSSE 240
Query: 254 XXXXXXXXXXXXXXXXXXXXXXDKTSPESTVPTFEDVKEITIRRSKLAKWLMEPFFDDLI 75
+ P S PT+ED+KEITIRR+KLAKW MEP+F++LI
Sbjct: 241 SGSRSHSEDEGSTGDGGMADSDEDVEPGSQGPTYEDIKEITIRRTKLAKWFMEPWFEELI 300
Query: 74 VGCFVRVGIGKSRTGPMYRLCMVR 3
+GCFVRVGIG+SR+GP+YRLCMVR
Sbjct: 301 IGCFVRVGIGRSRSGPVYRLCMVR 324