BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00001325
         (439 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_002285857.1 PREDICTED: photosystem II 22 kDa protein, chlorop...    60   4e-08
XP_019176958.1 PREDICTED: photosystem II 22 kDa protein, chlorop...    57   5e-07
XP_017247379.1 PREDICTED: photosystem II 22 kDa protein, chlorop...    55   5e-06

>XP_002285857.1 PREDICTED: photosystem II 22 kDa protein, chloroplastic [Vitis
           vinifera] CBI19017.3 unnamed protein product, partial
           [Vitis vinifera]
          Length = 270

 Score = 60.5 bits (145), Expect = 4e-08
 Identities = 44/93 (47%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
 Frame = -1

Query: 271 MAQSMLLTSSNFVSSHALDHLKRSEPSLLQTLRPKPFC---LPPLYNXXXXXXXXSRILA 101
           MAQ+ML+T S  VS H++  LKR    LLQ LRPKPF    LPPL             LA
Sbjct: 1   MAQTMLITPS--VSGHSVLDLKRQP--LLQRLRPKPFSHLLLPPLPTSSSTSSPAFTTLA 56

Query: 100 IFKSXXXXXXXXXXXXXXXXVEDGIFGTSGGIG 2
           +FKS                VEDGIFGTSGGIG
Sbjct: 57  LFKSKTKAAPSKKVTKPKPQVEDGIFGTSGGIG 89


>XP_019176958.1 PREDICTED: photosystem II 22 kDa protein, chloroplastic [Ipomoea
           nil]
          Length = 274

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 46/96 (47%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
 Frame = -1

Query: 271 MAQSMLLTSSNFVSSHALDHLKRSEPSLLQTLRPKP-----FCLP-PLYNXXXXXXXXSR 110
           MAQ+MLLT+S   SS ALD LKR + + LQTL+PKP     F LP P  +        +R
Sbjct: 1   MAQTMLLTAS--ASSPALD-LKR-QSTFLQTLKPKPSIQQHFLLPLPSSSSSSSSFSSTR 56

Query: 109 ILAIFKSXXXXXXXXXXXXXXXXVEDGIFGTSGGIG 2
           I+A+FKS                VEDGIFGTSGGIG
Sbjct: 57  IVALFKSKAKAAPAKKVVQPKPKVEDGIFGTSGGIG 92


>XP_017247379.1 PREDICTED: photosystem II 22 kDa protein, chloroplastic [Daucus
           carota subsp. sativus] KZN10895.1 hypothetical protein
           DCAR_003551 [Daucus carota subsp. sativus]
          Length = 272

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 44/94 (46%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
 Frame = -1

Query: 271 MAQSMLL-TSSNFVSSHALDHLKRSEPSLLQTLRPKPF---CLPPLYNXXXXXXXXSRIL 104
           MAQ+MLL +SS  VS HA D+LK     LLQ L+PKPF    LP L N            
Sbjct: 1   MAQTMLLMSSSTCVSGHAADNLKSPALPLLQRLKPKPFSHSLLPHLAN-ISKSSSTFTTY 59

Query: 103 AIFKSXXXXXXXXXXXXXXXXVEDGIFGTSGGIG 2
           A+FKS                VEDGIFGTSGGIG
Sbjct: 60  ALFKS-KAKAPAKKVVAPKPKVEDGIFGTSGGIG 92