BLASTX nr result
ID: Panax24_contig00001227
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00001227
(528 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017236756.1 PREDICTED: mediator of RNA polymerase II transcri... 100 9e-23
XP_012856290.1 PREDICTED: mediator of RNA polymerase II transcri... 99 3e-22
XP_012856289.1 PREDICTED: mediator of RNA polymerase II transcri... 99 3e-22
EYU21430.1 hypothetical protein MIMGU_mgv1a009886mg [Erythranthe... 99 8e-22
ALO61895.1 mediator of RNA polymerase II transcription subunit 6... 97 1e-21
XP_011651474.1 PREDICTED: mediator of RNA polymerase II transcri... 94 1e-20
XP_004149176.2 PREDICTED: mediator of RNA polymerase II transcri... 94 2e-20
EOY26989.1 RNA polymerase transcriptional regulation mediator-re... 92 2e-20
CBI36012.3 unnamed protein product, partial [Vitis vinifera] 93 3e-20
GAV75935.1 Med6 domain-containing protein [Cephalotus follicularis] 94 3e-20
CAN68925.1 hypothetical protein VITISV_044247 [Vitis vinifera] 93 5e-20
XP_011072456.1 PREDICTED: mediator of RNA polymerase II transcri... 93 5e-20
XP_002282496.1 PREDICTED: mediator of RNA polymerase II transcri... 93 6e-20
XP_008447573.1 PREDICTED: mediator of RNA polymerase II transcri... 92 7e-20
OMO66469.1 Mediator complex, subunit Med6 [Corchorus olitorius] 93 8e-20
OAY36561.1 hypothetical protein MANES_11G030300 [Manihot esculenta] 92 9e-20
CDP21043.1 unnamed protein product [Coffea canephora] 92 1e-19
XP_008447572.1 PREDICTED: mediator of RNA polymerase II transcri... 92 1e-19
XP_007024366.1 PREDICTED: mediator of RNA polymerase II transcri... 92 1e-19
XP_006372643.1 RNA polymerase transcriptional regulation mediato... 92 2e-19
>XP_017236756.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Daucus carota subsp. sativus] KZN06763.1 hypothetical
protein DCAR_007600 [Daucus carota subsp. sativus]
Length = 254
Score = 100 bits (249), Expect = 9e-23
Identities = 64/106 (60%), Positives = 69/106 (65%)
Frame = -1
Query: 528 ISKAFTTASSKLEKIGYVDAGNXXXXXXXXXXXEMINFKEVKRINHILASLQRKLXXXXX 349
ISKAFTTA+SKLEKIGYVD N E I+ KEVKRI+HILASLQRKL
Sbjct: 152 ISKAFTTAASKLEKIGYVDTENESATLLAKAPKETIDLKEVKRIDHILASLQRKLPPAPP 211
Query: 348 XXXXXXXXXXPLSAEGGESTSEAQQTDQLPSVDPILDQGPSKRIKF 211
P SAE GE+ SEAQ QLP VDPILDQGPSKR+KF
Sbjct: 212 PPPFPEGYNPPKSAE-GENASEAQA--QLPPVDPILDQGPSKRMKF 254
>XP_012856290.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
isoform X2 [Erythranthe guttata]
Length = 260
Score = 99.4 bits (246), Expect = 3e-22
Identities = 60/106 (56%), Positives = 70/106 (66%)
Frame = -1
Query: 528 ISKAFTTASSKLEKIGYVDAGNXXXXXXXXXXXEMINFKEVKRINHILASLQRKLXXXXX 349
ISKAF TA+SKLEKIGYVDA N E I+FKE+KR++HILASLQRKL
Sbjct: 155 ISKAFNTAASKLEKIGYVDAENESTSSEPKAAKETIDFKELKRVDHILASLQRKL-PPAP 213
Query: 348 XXXXXXXXXXPLSAEGGESTSEAQQTDQLPSVDPILDQGPSKRIKF 211
PLS E GE +S++Q + LP VDPI+DQGPSKRIKF
Sbjct: 214 PPPPFPDGYAPLSTE-GEKSSDSQSAEPLPPVDPIIDQGPSKRIKF 258
>XP_012856289.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
isoform X1 [Erythranthe guttata]
Length = 270
Score = 99.4 bits (246), Expect = 3e-22
Identities = 60/106 (56%), Positives = 70/106 (66%)
Frame = -1
Query: 528 ISKAFTTASSKLEKIGYVDAGNXXXXXXXXXXXEMINFKEVKRINHILASLQRKLXXXXX 349
ISKAF TA+SKLEKIGYVDA N E I+FKE+KR++HILASLQRKL
Sbjct: 165 ISKAFNTAASKLEKIGYVDAENESTSSEPKAAKETIDFKELKRVDHILASLQRKL-PPAP 223
Query: 348 XXXXXXXXXXPLSAEGGESTSEAQQTDQLPSVDPILDQGPSKRIKF 211
PLS E GE +S++Q + LP VDPI+DQGPSKRIKF
Sbjct: 224 PPPPFPDGYAPLSTE-GEKSSDSQSAEPLPPVDPIIDQGPSKRIKF 268
>EYU21430.1 hypothetical protein MIMGU_mgv1a009886mg [Erythranthe guttata]
Length = 328
Score = 99.4 bits (246), Expect = 8e-22
Identities = 60/106 (56%), Positives = 70/106 (66%)
Frame = -1
Query: 528 ISKAFTTASSKLEKIGYVDAGNXXXXXXXXXXXEMINFKEVKRINHILASLQRKLXXXXX 349
ISKAF TA+SKLEKIGYVDA N E I+FKE+KR++HILASLQRKL
Sbjct: 223 ISKAFNTAASKLEKIGYVDAENESTSSEPKAAKETIDFKELKRVDHILASLQRKL-PPAP 281
Query: 348 XXXXXXXXXXPLSAEGGESTSEAQQTDQLPSVDPILDQGPSKRIKF 211
PLS E GE +S++Q + LP VDPI+DQGPSKRIKF
Sbjct: 282 PPPPFPDGYAPLSTE-GEKSSDSQSAEPLPPVDPIIDQGPSKRIKF 326
>ALO61895.1 mediator of RNA polymerase II transcription subunit 6 [Rehmannia
glutinosa]
Length = 256
Score = 97.4 bits (241), Expect = 1e-21
Identities = 59/106 (55%), Positives = 70/106 (66%)
Frame = -1
Query: 528 ISKAFTTASSKLEKIGYVDAGNXXXXXXXXXXXEMINFKEVKRINHILASLQRKLXXXXX 349
ISKAF TA+SKLEKIGYVDA N E I+FKE+KR++HILASLQRKL
Sbjct: 153 ISKAFNTAASKLEKIGYVDAENESTSSETKAAKETIDFKELKRVDHILASLQRKLPPAPP 212
Query: 348 XXXXXXXXXXPLSAEGGESTSEAQQTDQLPSVDPILDQGPSKRIKF 211
P +AEG +S S+ QQ + LP VDPI+DQGPSKR+KF
Sbjct: 213 PPPFPDGYTPP-TAEGDKS-SDTQQAEPLPPVDPIIDQGPSKRMKF 256
>XP_011651474.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
isoform X2 [Cucumis sativus]
Length = 236
Score = 94.4 bits (233), Expect = 1e-20
Identities = 56/106 (52%), Positives = 64/106 (60%)
Frame = -1
Query: 528 ISKAFTTASSKLEKIGYVDAGNXXXXXXXXXXXEMINFKEVKRINHILASLQRKLXXXXX 349
ISKAFTTASSKLEKIGYVD+ N E INFKEVKR++HILASLQRKL
Sbjct: 130 ISKAFTTASSKLEKIGYVDSEN--ESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPP 187
Query: 348 XXXXXXXXXXPLSAEGGESTSEAQQTDQLPSVDPILDQGPSKRIKF 211
+AE + Q Q PS DPI+DQGP+KR+KF
Sbjct: 188 PPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF 233
>XP_004149176.2 PREDICTED: mediator of RNA polymerase II transcription subunit 6
isoform X1 [Cucumis sativus] KGN58013.1 hypothetical
protein Csa_3G434940 [Cucumis sativus]
Length = 257
Score = 94.4 bits (233), Expect = 2e-20
Identities = 56/106 (52%), Positives = 64/106 (60%)
Frame = -1
Query: 528 ISKAFTTASSKLEKIGYVDAGNXXXXXXXXXXXEMINFKEVKRINHILASLQRKLXXXXX 349
ISKAFTTASSKLEKIGYVD+ N E INFKEVKR++HILASLQRKL
Sbjct: 151 ISKAFTTASSKLEKIGYVDSEN--ESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPP 208
Query: 348 XXXXXXXXXXPLSAEGGESTSEAQQTDQLPSVDPILDQGPSKRIKF 211
+AE + Q Q PS DPI+DQGP+KR+KF
Sbjct: 209 PPPFPEGYAPAATAETEKGPENQQGESQQPSADPIIDQGPAKRMKF 254
>EOY26989.1 RNA polymerase transcriptional regulation mediator-related isoform
2 [Theobroma cacao]
Length = 184
Score = 92.4 bits (228), Expect = 2e-20
Identities = 53/107 (49%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Frame = -1
Query: 528 ISKAFTTASSKLEKIGYVDAGNXXXXXXXXXXXEMINFKEVKRINHILASLQRKLXXXXX 349
ISKAFTTA+SKLEKIGYVD N E I+FKEVKR++HILASLQRKL
Sbjct: 78 ISKAFTTAASKLEKIGYVDTENESETFESKGGKETIDFKEVKRVDHILASLQRKLPPAPP 137
Query: 348 XXXXXXXXXXPLSAEGGESTSEAQQTD-QLPSVDPILDQGPSKRIKF 211
+AE + Q + Q P++DPI+DQGP+KR+KF
Sbjct: 138 PPPFPEGFIPLATAEAEKDPENQQAVETQPPAIDPIIDQGPAKRMKF 184
>CBI36012.3 unnamed protein product, partial [Vitis vinifera]
Length = 226
Score = 93.2 bits (230), Expect = 3e-20
Identities = 58/108 (53%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
Frame = -1
Query: 528 ISKAFTTASSKLEKIGYVDAGNXXXXXXXXXXXEMINFKEVKRINHILASLQRKLXXXXX 349
ISKAFTTA+SKLEKIGYVDA N E I+FKEV R++ ILASLQRKL
Sbjct: 120 ISKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVMRVDQILASLQRKLPPAPP 179
Query: 348 XXXXXXXXXXPLSAEG--GESTSEAQQTDQLPSVDPILDQGPSKRIKF 211
P +AEG G T +A + QLP++DPI+DQGPSKR+KF
Sbjct: 180 PPQFPEGYAPPPTAEGEKGPETQQAAE-PQLPALDPIIDQGPSKRMKF 226
>GAV75935.1 Med6 domain-containing protein [Cephalotus follicularis]
Length = 244
Score = 93.6 bits (231), Expect = 3e-20
Identities = 56/108 (51%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
Frame = -1
Query: 528 ISKAFTTASSKLEKIGYVDAGNXXXXXXXXXXXEMINFKEVKRINHILASLQRKLXXXXX 349
ISKAFTTA+SKLEKIGYVDA N E+I+FKEVKR++HILASL+RKL
Sbjct: 138 ISKAFTTAASKLEKIGYVDAENENVHSESKVGKELIDFKEVKRVDHILASLKRKLPPAPP 197
Query: 348 XXXXXXXXXXPLS--AEGGESTSEAQQTDQLPSVDPILDQGPSKRIKF 211
L+ AE G T +A + Q P +DPI+DQGP+KR+KF
Sbjct: 198 PPPFPEGYIPALTSEAEKGPETQQAGE-PQPPPIDPIIDQGPAKRMKF 244
>CAN68925.1 hypothetical protein VITISV_044247 [Vitis vinifera]
Length = 253
Score = 93.2 bits (230), Expect = 5e-20
Identities = 58/108 (53%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
Frame = -1
Query: 528 ISKAFTTASSKLEKIGYVDAGNXXXXXXXXXXXEMINFKEVKRINHILASLQRKLXXXXX 349
ISKAFTTA+SKLEKIGYVDA N E I+FKEV R++ ILASLQRKL
Sbjct: 147 ISKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVMRVDQILASLQRKLPPAPP 206
Query: 348 XXXXXXXXXXPLSAEG--GESTSEAQQTDQLPSVDPILDQGPSKRIKF 211
P +AEG G T +A + QLP++DPI+DQGPSKR+KF
Sbjct: 207 APQFPEGYAPPPTAEGEKGPETQQAAE-PQLPALDPIIDQGPSKRMKF 253
>XP_011072456.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Sesamum indicum]
Length = 254
Score = 93.2 bits (230), Expect = 5e-20
Identities = 55/106 (51%), Positives = 67/106 (63%)
Frame = -1
Query: 528 ISKAFTTASSKLEKIGYVDAGNXXXXXXXXXXXEMINFKEVKRINHILASLQRKLXXXXX 349
ISKAF TA+SKLEKIGYVDA N E I+FKE+KR++HILASLQRKL
Sbjct: 151 ISKAFNTAASKLEKIGYVDAENESTSSEPKAAKETIDFKELKRVDHILASLQRKLPPAPP 210
Query: 348 XXXXXXXXXXPLSAEGGESTSEAQQTDQLPSVDPILDQGPSKRIKF 211
P + GE +S+ QQ + +VDPI+DQGPSKR+KF
Sbjct: 211 PPPFPEGYAPPTAE--GEKSSDTQQAEPQGAVDPIIDQGPSKRMKF 254
>XP_002282496.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Vitis vinifera]
Length = 258
Score = 93.2 bits (230), Expect = 6e-20
Identities = 58/108 (53%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
Frame = -1
Query: 528 ISKAFTTASSKLEKIGYVDAGNXXXXXXXXXXXEMINFKEVKRINHILASLQRKLXXXXX 349
ISKAFTTA+SKLEKIGYVDA N E I+FKEV R++ ILASLQRKL
Sbjct: 152 ISKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVMRVDQILASLQRKLPPAPP 211
Query: 348 XXXXXXXXXXPLSAEG--GESTSEAQQTDQLPSVDPILDQGPSKRIKF 211
P +AEG G T +A + QLP++DPI+DQGPSKR+KF
Sbjct: 212 PPQFPEGYAPPPTAEGEKGPETQQAAE-PQLPALDPIIDQGPSKRMKF 258
>XP_008447573.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
isoform X2 [Cucumis melo]
Length = 234
Score = 92.4 bits (228), Expect = 7e-20
Identities = 55/106 (51%), Positives = 64/106 (60%)
Frame = -1
Query: 528 ISKAFTTASSKLEKIGYVDAGNXXXXXXXXXXXEMINFKEVKRINHILASLQRKLXXXXX 349
ISKAFTTASSKLEKIGYVD+ N E INFKEVKR++HILASLQRKL
Sbjct: 131 ISKAFTTASSKLEKIGYVDSEN--ESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPP 188
Query: 348 XXXXXXXXXXPLSAEGGESTSEAQQTDQLPSVDPILDQGPSKRIKF 211
+A+ + Q Q PS DPI+DQGP+KR+KF
Sbjct: 189 PPPFPEGYAPAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF 234
>OMO66469.1 Mediator complex, subunit Med6 [Corchorus olitorius]
Length = 258
Score = 92.8 bits (229), Expect = 8e-20
Identities = 57/109 (52%), Positives = 68/109 (62%), Gaps = 3/109 (2%)
Frame = -1
Query: 528 ISKAFTTASSKLEKIGYVDAGNXXXXXXXXXXXEMINFKEVKRINHILASLQRKLXXXXX 349
ISKAFTTA+SKLEKIGYVD N E I+FKEVKR++HILASLQRKL
Sbjct: 151 ISKAFTTAASKLEKIGYVDTENEKETSESKGGKETIDFKEVKRVDHILASLQRKLPPAPP 210
Query: 348 XXXXXXXXXXPLSAEGGESTSEAQQT---DQLPSVDPILDQGPSKRIKF 211
P +AE E E QQ+ Q P++DPI+DQGP+KR+KF
Sbjct: 211 PPPFPDGFIPPATAE-AEKNPENQQSVVESQPPAIDPIIDQGPAKRMKF 258
>OAY36561.1 hypothetical protein MANES_11G030300 [Manihot esculenta]
Length = 247
Score = 92.4 bits (228), Expect = 9e-20
Identities = 54/106 (50%), Positives = 65/106 (61%)
Frame = -1
Query: 528 ISKAFTTASSKLEKIGYVDAGNXXXXXXXXXXXEMINFKEVKRINHILASLQRKLXXXXX 349
ISKAFTTA+SKLEKIGYVD G ++I+FKEVKRI+HILASLQRKL
Sbjct: 143 ISKAFTTAASKLEKIGYVDEGE-GVPCEPKTNKDLIDFKEVKRIDHILASLQRKLPPAPP 201
Query: 348 XXXXXXXXXXPLSAEGGESTSEAQQTDQLPSVDPILDQGPSKRIKF 211
P + E +S Q + P VDPI+DQGP+KR+KF
Sbjct: 202 PTPFPDGYAPPATTEAEKSAETQQGAESQPPVDPIIDQGPAKRMKF 247
>CDP21043.1 unnamed protein product [Coffea canephora]
Length = 253
Score = 92.4 bits (228), Expect = 1e-19
Identities = 52/105 (49%), Positives = 65/105 (61%)
Frame = -1
Query: 528 ISKAFTTASSKLEKIGYVDAGNXXXXXXXXXXXEMINFKEVKRINHILASLQRKLXXXXX 349
ISKAF T +SKLEKIGYVDA N E I+FKE+KR++HILASLQRKL
Sbjct: 148 ISKAFNTVASKLEKIGYVDAENETTASESKASKETIDFKEIKRVDHILASLQRKLPAAPP 207
Query: 348 XXXXXXXXXXPLSAEGGESTSEAQQTDQLPSVDPILDQGPSKRIK 214
P +AEG + + + Q Q ++DPI+DQGPSKR+K
Sbjct: 208 APAFPEGYTPPTTAEGEKGSEDQQAELQTATLDPIIDQGPSKRVK 252
>XP_008447572.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
isoform X1 [Cucumis melo]
Length = 255
Score = 92.4 bits (228), Expect = 1e-19
Identities = 55/106 (51%), Positives = 64/106 (60%)
Frame = -1
Query: 528 ISKAFTTASSKLEKIGYVDAGNXXXXXXXXXXXEMINFKEVKRINHILASLQRKLXXXXX 349
ISKAFTTASSKLEKIGYVD+ N E INFKEVKR++HILASLQRKL
Sbjct: 152 ISKAFTTASSKLEKIGYVDSEN--ESEEVKPAKETINFKEVKRVDHILASLQRKLPPAPP 209
Query: 348 XXXXXXXXXXPLSAEGGESTSEAQQTDQLPSVDPILDQGPSKRIKF 211
+A+ + Q Q PS DPI+DQGP+KR+KF
Sbjct: 210 PPPFPEGYAPAPTADTEKGPENQQGESQQPSADPIIDQGPAKRMKF 255
>XP_007024366.1 PREDICTED: mediator of RNA polymerase II transcription subunit 6
[Theobroma cacao] EOY26988.1 RNA polymerase
transcriptional regulation mediator-related isoform 1
[Theobroma cacao]
Length = 257
Score = 92.4 bits (228), Expect = 1e-19
Identities = 53/107 (49%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Frame = -1
Query: 528 ISKAFTTASSKLEKIGYVDAGNXXXXXXXXXXXEMINFKEVKRINHILASLQRKLXXXXX 349
ISKAFTTA+SKLEKIGYVD N E I+FKEVKR++HILASLQRKL
Sbjct: 151 ISKAFTTAASKLEKIGYVDTENESETFESKGGKETIDFKEVKRVDHILASLQRKLPPAPP 210
Query: 348 XXXXXXXXXXPLSAEGGESTSEAQQTD-QLPSVDPILDQGPSKRIKF 211
+AE + Q + Q P++DPI+DQGP+KR+KF
Sbjct: 211 PPPFPEGFIPLATAEAEKDPENQQAVETQPPAIDPIIDQGPAKRMKF 257
>XP_006372643.1 RNA polymerase transcriptional regulation mediator-related family
protein [Populus trichocarpa] ERP50440.1 RNA polymerase
transcriptional regulation mediator-related family
protein [Populus trichocarpa]
Length = 259
Score = 92.0 bits (227), Expect = 2e-19
Identities = 58/108 (53%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
Frame = -1
Query: 528 ISKAFTTASSKLEKIGYVDAGNXXXXXXXXXXXEMINFKEVKRINHILASLQRKLXXXXX 349
ISKAF TA+SKLEKIGYVD+ N E+I+FKEVKRI+HILASLQRKL
Sbjct: 153 ISKAFGTAASKLEKIGYVDSENEGAASESKTGKEVIDFKEVKRIDHILASLQRKLPPAPP 212
Query: 348 XXXXXXXXXXPLSAEGGESTSEAQQ--TDQLPSVDPILDQGPSKRIKF 211
+ E E E QQ QLPSVDPI+DQGP+KR+KF
Sbjct: 213 PPSFPEGYVPQPTTE-EEKGPETQQGGEPQLPSVDPIIDQGPAKRMKF 259