BLASTX nr result
ID: Panax24_contig00001223
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00001223
(1181 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017249653.1 PREDICTED: putative exosome complex component rrp... 409 e-141
XP_002282635.1 PREDICTED: putative exosome complex component rrp... 406 e-139
XP_012080072.1 PREDICTED: putative exosome complex component rrp... 401 e-137
XP_002318044.1 exonuclease-related family protein [Populus trich... 395 e-135
XP_018821286.1 PREDICTED: putative exosome complex component rrp... 395 e-135
XP_011044305.1 PREDICTED: putative exosome complex component rrp... 393 e-134
XP_010251261.1 PREDICTED: putative exosome complex component rrp... 392 e-134
ONI08375.1 hypothetical protein PRUPE_5G174300 [Prunus persica] 391 e-133
XP_008239762.1 PREDICTED: putative exosome complex component rrp... 391 e-133
XP_007209525.1 hypothetical protein PRUPE_ppa010609mg [Prunus pe... 391 e-133
XP_019197270.1 PREDICTED: putative exosome complex component rrp... 389 e-133
XP_012478610.1 PREDICTED: putative exosome complex component rrp... 388 e-132
XP_011071845.1 PREDICTED: putative exosome complex component rrp... 387 e-132
XP_016666803.1 PREDICTED: putative exosome complex component rrp... 387 e-132
CDP12399.1 unnamed protein product [Coffea canephora] 384 e-131
XP_016721111.1 PREDICTED: putative exosome complex component rrp... 383 e-130
GAV89938.1 hypothetical protein CFOL_v3_33349, partial [Cephalot... 386 e-130
OMO81471.1 Exosome complex RNA-binding protein 1/RRP40/RRP4 [Cor... 383 e-130
XP_006476772.1 PREDICTED: putative exosome complex component rrp... 381 e-130
XP_007036203.1 PREDICTED: putative exosome complex component rrp... 381 e-130
>XP_017249653.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Daucus carota subsp. sativus] KZM93240.1 hypothetical
protein DCAR_016485 [Daucus carota subsp. sativus]
Length = 241
Score = 409 bits (1051), Expect = e-141
Identities = 197/239 (82%), Positives = 224/239 (93%)
Frame = +2
Query: 158 MEAAKPANSPTSFVDQLVVPGDVVLDLSTLANQTIKLGGGLRQDCDAVTVMKAGKLRFSK 337
M A+P N+ S++D+LVVPGDVVLDLS+++NQTIKLGGGLRQDCD++T MKAG LRFSK
Sbjct: 1 MAIAEPTNNSPSYIDKLVVPGDVVLDLSSMSNQTIKLGGGLRQDCDSITAMKAGMLRFSK 60
Query: 338 PNKYWIESSQKRYVPSVGESVFGIVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPK 517
PNKYW+ESSQKRYVPS G++V GIVVDTKA+NFL+DIKGPALA+LPVLAFEGGTRRNIPK
Sbjct: 61 PNKYWVESSQKRYVPSAGDAVLGIVVDTKAENFLIDIKGPALAYLPVLAFEGGTRRNIPK 120
Query: 518 FEVGTLLYVRIVKANVGMNPELACMDACGKAAEFGPLKDGYMFESSTGLSRMLLSSPGCP 697
FEVGTL+YVR+VKAN+GMNP+L+CMDA GKAAEFGPLKDGYMFE+STGLSRMLLSSP CP
Sbjct: 121 FEVGTLIYVRVVKANIGMNPDLSCMDASGKAAEFGPLKDGYMFETSTGLSRMLLSSPACP 180
Query: 698 VLEALGKKLSFEIAVGLNGRVWVNATSPSIVILVANAIMNSESLTGVQQKIMVDKLVGR 874
VLEALGKKLSFEIAVGLNGRVWVNA +PS VILV+NAIMNSE+LT VQQK+MVDKL+ R
Sbjct: 181 VLEALGKKLSFEIAVGLNGRVWVNAAAPSTVILVSNAIMNSETLTSVQQKLMVDKLLQR 239
>XP_002282635.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Vitis vinifera] CBI15022.3 unnamed protein product,
partial [Vitis vinifera]
Length = 237
Score = 406 bits (1043), Expect = e-139
Identities = 203/233 (87%), Positives = 217/233 (93%)
Frame = +2
Query: 179 NSPTSFVDQLVVPGDVVLDLSTLANQTIKLGGGLRQDCDAVTVMKAGKLRFSKPNKYWIE 358
N+P SFVDQLVVPGDVVLDLS + NQTIKLGGGL QDCDA+TV KAG+LRFSKPNKYW+E
Sbjct: 4 NTPASFVDQLVVPGDVVLDLSKMGNQTIKLGGGLHQDCDAITVTKAGRLRFSKPNKYWVE 63
Query: 359 SSQKRYVPSVGESVFGIVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLL 538
SSQKRYVP V ++V GIVVD+KADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFE GTLL
Sbjct: 64 SSQKRYVPCVEDTVLGIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLL 123
Query: 539 YVRIVKANVGMNPELACMDACGKAAEFGPLKDGYMFESSTGLSRMLLSSPGCPVLEALGK 718
YVR+VKAN GMNPEL+C DA GKAAEFGPLKDGYMFESSTGLSRMLLSSP CPVLEALGK
Sbjct: 124 YVRVVKANTGMNPELSCTDASGKAAEFGPLKDGYMFESSTGLSRMLLSSPTCPVLEALGK 183
Query: 719 KLSFEIAVGLNGRVWVNATSPSIVILVANAIMNSESLTGVQQKIMVDKLVGRM 877
KLSFEIAVGLNGRVWVNA+SPS VILVANAIMNSESL+ VQQKIMVDKL+ R+
Sbjct: 184 KLSFEIAVGLNGRVWVNASSPSTVILVANAIMNSESLSVVQQKIMVDKLLQRI 236
>XP_012080072.1 PREDICTED: putative exosome complex component rrp40 [Jatropha
curcas] KDP31104.1 hypothetical protein JCGZ_11480
[Jatropha curcas]
Length = 241
Score = 401 bits (1030), Expect = e-137
Identities = 198/237 (83%), Positives = 220/237 (92%)
Frame = +2
Query: 167 AKPANSPTSFVDQLVVPGDVVLDLSTLANQTIKLGGGLRQDCDAVTVMKAGKLRFSKPNK 346
AKP++SPTS VD+LVVPGDVV+DLST++NQTIKLGGGLRQDCDA++V K+GKLRFSKPNK
Sbjct: 3 AKPSSSPTSLVDKLVVPGDVVIDLSTMSNQTIKLGGGLRQDCDAISVTKSGKLRFSKPNK 62
Query: 347 YWIESSQKRYVPSVGESVFGIVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEV 526
YW+E SQKRYVP +SV GIVVD+KA+NFLVDIKGP LAFLPVLAFEGGTRRNIPKFEV
Sbjct: 63 YWVEGSQKRYVPCAEDSVLGIVVDSKAENFLVDIKGPTLAFLPVLAFEGGTRRNIPKFEV 122
Query: 527 GTLLYVRIVKANVGMNPELACMDACGKAAEFGPLKDGYMFESSTGLSRMLLSSPGCPVLE 706
GTLLYVR+VKAN GMNPEL+C DA GKAAEFG LKDGYMFE STGLSRMLLSSP CPVLE
Sbjct: 123 GTLLYVRVVKANPGMNPELSCTDASGKAAEFGVLKDGYMFECSTGLSRMLLSSPTCPVLE 182
Query: 707 ALGKKLSFEIAVGLNGRVWVNATSPSIVILVANAIMNSESLTGVQQKIMVDKLVGRM 877
ALG KLSFEIAVGLNGRVWVNATSPS VI+VANAIMNSE+L+GVQQKIMV+KL+ ++
Sbjct: 183 ALGNKLSFEIAVGLNGRVWVNATSPSTVIIVANAIMNSETLSGVQQKIMVEKLLQKI 239
>XP_002318044.1 exonuclease-related family protein [Populus trichocarpa] ABK93275.1
unknown [Populus trichocarpa] EEE96264.1
exonuclease-related family protein [Populus trichocarpa]
Length = 242
Score = 395 bits (1014), Expect = e-135
Identities = 193/237 (81%), Positives = 217/237 (91%)
Frame = +2
Query: 167 AKPANSPTSFVDQLVVPGDVVLDLSTLANQTIKLGGGLRQDCDAVTVMKAGKLRFSKPNK 346
+K + SP +F+D LVVPGDVV+DLS++ NQTIKLG GLRQDCDA++VMKAGKLRFSKPNK
Sbjct: 3 SKSSGSPATFIDNLVVPGDVVVDLSSMTNQTIKLGSGLRQDCDAISVMKAGKLRFSKPNK 62
Query: 347 YWIESSQKRYVPSVGESVFGIVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEV 526
YW+E+SQKRYVP +SV GIVVD+K+DNFL+DIKGPALAFLPVLAFEGGTRRNIPKFE
Sbjct: 63 YWVETSQKRYVPCAEDSVLGIVVDSKSDNFLIDIKGPALAFLPVLAFEGGTRRNIPKFEA 122
Query: 527 GTLLYVRIVKANVGMNPELACMDACGKAAEFGPLKDGYMFESSTGLSRMLLSSPGCPVLE 706
GTLLYVR+VKAN GMNPEL+C DA GKAAEFG LKDGYMFE STGLSRMLLSSP CPVLE
Sbjct: 123 GTLLYVRVVKANPGMNPELSCTDASGKAAEFGALKDGYMFECSTGLSRMLLSSPTCPVLE 182
Query: 707 ALGKKLSFEIAVGLNGRVWVNATSPSIVILVANAIMNSESLTGVQQKIMVDKLVGRM 877
ALGKKLSFEIAVGLNGRVWVNA SPSIVI+VANAIMNSE+L+GVQQKIM +KL+ ++
Sbjct: 183 ALGKKLSFEIAVGLNGRVWVNANSPSIVIIVANAIMNSETLSGVQQKIMAEKLLQKI 239
>XP_018821286.1 PREDICTED: putative exosome complex component rrp40 [Juglans regia]
Length = 243
Score = 395 bits (1014), Expect = e-135
Identities = 196/232 (84%), Positives = 213/232 (91%)
Frame = +2
Query: 173 PANSPTSFVDQLVVPGDVVLDLSTLANQTIKLGGGLRQDCDAVTVMKAGKLRFSKPNKYW 352
P+ SP SFVDQLVVPGDVVLDL+++ NQTIKLGGGLRQDCDA+ V KAGKLR SKPNKYW
Sbjct: 5 PSGSPASFVDQLVVPGDVVLDLNSMTNQTIKLGGGLRQDCDAIAVTKAGKLRCSKPNKYW 64
Query: 353 IESSQKRYVPSVGESVFGIVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGT 532
+ESSQKRY P G+SV GIVVD+KADNFLVDIKGPALA+LPVLAFEGGTRRNIPKFEVGT
Sbjct: 65 VESSQKRYEPHAGDSVLGIVVDSKADNFLVDIKGPALAYLPVLAFEGGTRRNIPKFEVGT 124
Query: 533 LLYVRIVKANVGMNPELACMDACGKAAEFGPLKDGYMFESSTGLSRMLLSSPGCPVLEAL 712
LLYVR+VKAN GMNPEL+C DA GKAAEFG LKDGYMFESSTGLSR LLSSP CPVL+ L
Sbjct: 125 LLYVRVVKANPGMNPELSCTDASGKAAEFGQLKDGYMFESSTGLSRTLLSSPTCPVLDVL 184
Query: 713 GKKLSFEIAVGLNGRVWVNATSPSIVILVANAIMNSESLTGVQQKIMVDKLV 868
GKKLSFEIAVGLNGRVWVNATSPS VI+VANAIMNSESL+ VQQ+IMV+KL+
Sbjct: 185 GKKLSFEIAVGLNGRVWVNATSPSTVIVVANAIMNSESLSAVQQRIMVEKLL 236
>XP_011044305.1 PREDICTED: putative exosome complex component rrp40 [Populus
euphratica]
Length = 242
Score = 393 bits (1010), Expect = e-134
Identities = 190/237 (80%), Positives = 218/237 (91%)
Frame = +2
Query: 167 AKPANSPTSFVDQLVVPGDVVLDLSTLANQTIKLGGGLRQDCDAVTVMKAGKLRFSKPNK 346
+K + SP +F+D LVVPGDVV+DLS++ NQTIKLGGGLRQDCDA++VMKAGKLRFSKPNK
Sbjct: 3 SKSSGSPATFIDNLVVPGDVVVDLSSMTNQTIKLGGGLRQDCDAISVMKAGKLRFSKPNK 62
Query: 347 YWIESSQKRYVPSVGESVFGIVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEV 526
YW+E+SQKRYVP +S+ GIVVD+K+DNFL+D+KGPALAFLPVLAFEGGTRRNIPKFE
Sbjct: 63 YWVETSQKRYVPCAEDSILGIVVDSKSDNFLIDMKGPALAFLPVLAFEGGTRRNIPKFEA 122
Query: 527 GTLLYVRIVKANVGMNPELACMDACGKAAEFGPLKDGYMFESSTGLSRMLLSSPGCPVLE 706
GTLLYVR+VKAN GM+PEL+C DA GKAAEFG LKDGYMFE STGLSRMLLSSP CPVLE
Sbjct: 123 GTLLYVRVVKANPGMSPELSCTDASGKAAEFGALKDGYMFECSTGLSRMLLSSPTCPVLE 182
Query: 707 ALGKKLSFEIAVGLNGRVWVNATSPSIVILVANAIMNSESLTGVQQKIMVDKLVGRM 877
ALGKKLSFEIAVGLNGRVWVNA SPSIVI+VANAIMNSE+L+G+QQKIM +KL+ ++
Sbjct: 183 ALGKKLSFEIAVGLNGRVWVNANSPSIVIIVANAIMNSETLSGIQQKIMAEKLLQKI 239
>XP_010251261.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Nelumbo nucifera]
Length = 243
Score = 392 bits (1008), Expect = e-134
Identities = 191/230 (83%), Positives = 214/230 (93%)
Frame = +2
Query: 179 NSPTSFVDQLVVPGDVVLDLSTLANQTIKLGGGLRQDCDAVTVMKAGKLRFSKPNKYWIE 358
N TSF+DQ+VVPGDVVLDLS+++NQTIKLGGGLRQDCD ++VMKAGKL+FSKPNKYW+E
Sbjct: 7 NLTTSFIDQIVVPGDVVLDLSSMSNQTIKLGGGLRQDCDTISVMKAGKLKFSKPNKYWVE 66
Query: 359 SSQKRYVPSVGESVFGIVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVGTLL 538
SSQKRYVP V +++ G VVD+KADNFLVDIKGP LAFLPVLAFEGGTRRNIPK+E GTLL
Sbjct: 67 SSQKRYVPCVEDTILGTVVDSKADNFLVDIKGPTLAFLPVLAFEGGTRRNIPKYEAGTLL 126
Query: 539 YVRIVKANVGMNPELACMDACGKAAEFGPLKDGYMFESSTGLSRMLLSSPGCPVLEALGK 718
YVR+VKAN GMNPEL+C DA GKAAEFG LKDGYMFE+STGLSRMLLSSP CPVLEALGK
Sbjct: 127 YVRVVKANAGMNPELSCTDASGKAAEFGVLKDGYMFETSTGLSRMLLSSPTCPVLEALGK 186
Query: 719 KLSFEIAVGLNGRVWVNATSPSIVILVANAIMNSESLTGVQQKIMVDKLV 868
KLSFEIA+GLNGRVWVNA SPS VILV+NAIMNSESL+GVQQ+IMV+KL+
Sbjct: 187 KLSFEIAIGLNGRVWVNAASPSTVILVSNAIMNSESLSGVQQRIMVEKLM 236
>ONI08375.1 hypothetical protein PRUPE_5G174300 [Prunus persica]
Length = 243
Score = 391 bits (1004), Expect = e-133
Identities = 190/235 (80%), Positives = 212/235 (90%)
Frame = +2
Query: 164 AAKPANSPTSFVDQLVVPGDVVLDLSTLANQTIKLGGGLRQDCDAVTVMKAGKLRFSKPN 343
A K SP SFVDQ VVPGDVVLDL+++ANQTIKLGGGLRQDCDA+ MKAG L+FSKPN
Sbjct: 2 AEKATGSPASFVDQSVVPGDVVLDLTSMANQTIKLGGGLRQDCDAIAAMKAGTLKFSKPN 61
Query: 344 KYWIESSQKRYVPSVGESVFGIVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFE 523
KYW+E+SQKRYVP G+SV GIV D+KADNFLVDIKGP +AFLPVLAFEGGTRRNIPKFE
Sbjct: 62 KYWVETSQKRYVPCAGDSVLGIVADSKADNFLVDIKGPTIAFLPVLAFEGGTRRNIPKFE 121
Query: 524 VGTLLYVRIVKANVGMNPELACMDACGKAAEFGPLKDGYMFESSTGLSRMLLSSPGCPVL 703
VGTLLYVR+VKAN GMNPEL+C+DA GKAAE+GPLKDGYMFE STGLS+MLLSSP CPVL
Sbjct: 122 VGTLLYVRVVKANPGMNPELSCIDASGKAAEYGPLKDGYMFECSTGLSKMLLSSPRCPVL 181
Query: 704 EALGKKLSFEIAVGLNGRVWVNATSPSIVILVANAIMNSESLTGVQQKIMVDKLV 868
EALGK +SFE A+GLNGRVWVNA SPS V +VANAIMN+ESL+GVQQ+IMVDKL+
Sbjct: 182 EALGKNISFETAIGLNGRVWVNAGSPSTVTVVANAIMNAESLSGVQQRIMVDKLI 236
>XP_008239762.1 PREDICTED: putative exosome complex component rrp40 [Prunus mume]
Length = 243
Score = 391 bits (1004), Expect = e-133
Identities = 190/235 (80%), Positives = 212/235 (90%)
Frame = +2
Query: 164 AAKPANSPTSFVDQLVVPGDVVLDLSTLANQTIKLGGGLRQDCDAVTVMKAGKLRFSKPN 343
A K SP SFVDQ VVPGDVVLDL+++ANQTIKLGGGLRQDCDA+T MKAG L+FSKPN
Sbjct: 2 AEKATGSPASFVDQSVVPGDVVLDLTSMANQTIKLGGGLRQDCDAITAMKAGTLKFSKPN 61
Query: 344 KYWIESSQKRYVPSVGESVFGIVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFE 523
KYW+E+SQKRYVP G+SV GIV D+KADNFLVDIKGP +AFLPVLAFEGGTRRN+PKFE
Sbjct: 62 KYWVETSQKRYVPCAGDSVLGIVADSKADNFLVDIKGPTIAFLPVLAFEGGTRRNVPKFE 121
Query: 524 VGTLLYVRIVKANVGMNPELACMDACGKAAEFGPLKDGYMFESSTGLSRMLLSSPGCPVL 703
VGTLLYVR+VKAN GMNPEL+C+DA GKAAE+GPLK GYMFE STGL RMLLSSP CPVL
Sbjct: 122 VGTLLYVRVVKANPGMNPELSCIDASGKAAEYGPLKGGYMFECSTGLPRMLLSSPRCPVL 181
Query: 704 EALGKKLSFEIAVGLNGRVWVNATSPSIVILVANAIMNSESLTGVQQKIMVDKLV 868
EALGK +SFE A+GLNGRVWVNA SPS VI+VANAIMN+ESL+GVQQ+IMVDKL+
Sbjct: 182 EALGKNISFETAIGLNGRVWVNAGSPSTVIVVANAIMNAESLSGVQQRIMVDKLI 236
>XP_007209525.1 hypothetical protein PRUPE_ppa010609mg [Prunus persica]
Length = 243
Score = 391 bits (1004), Expect = e-133
Identities = 190/235 (80%), Positives = 212/235 (90%)
Frame = +2
Query: 164 AAKPANSPTSFVDQLVVPGDVVLDLSTLANQTIKLGGGLRQDCDAVTVMKAGKLRFSKPN 343
A K SP SFVDQ VVPGDVVLDL+++ANQTIKLGGGLRQDCDA+ MKAG L+FSKPN
Sbjct: 2 AEKATGSPASFVDQSVVPGDVVLDLTSMANQTIKLGGGLRQDCDAIAAMKAGTLKFSKPN 61
Query: 344 KYWIESSQKRYVPSVGESVFGIVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFE 523
KYW+E+SQKRYVP G+SV GIV D+KADNFLVDIKGP +AFLPVLAFEGGTRRNIPKFE
Sbjct: 62 KYWVETSQKRYVPCAGDSVLGIVADSKADNFLVDIKGPTIAFLPVLAFEGGTRRNIPKFE 121
Query: 524 VGTLLYVRIVKANVGMNPELACMDACGKAAEFGPLKDGYMFESSTGLSRMLLSSPGCPVL 703
VGTLLYVR+VKAN GMNPEL+C+DA GKAAE+GPLKDGYMFE STGLS+MLLSSP CPVL
Sbjct: 122 VGTLLYVRVVKANPGMNPELSCIDASGKAAEYGPLKDGYMFECSTGLSKMLLSSPRCPVL 181
Query: 704 EALGKKLSFEIAVGLNGRVWVNATSPSIVILVANAIMNSESLTGVQQKIMVDKLV 868
EALGK +SFE A+GLNGRVWVNA SPS V +VANAIMN+ESL+GVQQ+IMVDKL+
Sbjct: 182 EALGKNISFETAIGLNGRVWVNAGSPSTVTVVANAIMNAESLSGVQQRIMVDKLI 236
>XP_019197270.1 PREDICTED: putative exosome complex component rrp40 [Ipomoea nil]
Length = 242
Score = 389 bits (999), Expect = e-133
Identities = 193/241 (80%), Positives = 219/241 (90%)
Frame = +2
Query: 155 EMEAAKPANSPTSFVDQLVVPGDVVLDLSTLANQTIKLGGGLRQDCDAVTVMKAGKLRFS 334
+MEA +P N+ +SF+DQ VVPGDV+LDLS+LAN+TIKLGGGLRQDCD V+VMKAG LR++
Sbjct: 2 KMEAKQP-NTLSSFIDQPVVPGDVILDLSSLANETIKLGGGLRQDCDTVSVMKAGILRYT 60
Query: 335 KPNKYWIESSQKRYVPSVGESVFGIVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIP 514
KPNKYW+ESSQKRYVPS G+SV GIVVDTK DNFLVDIKG LAFLPVLAFEGGTRRNIP
Sbjct: 61 KPNKYWVESSQKRYVPSAGDSVLGIVVDTKPDNFLVDIKGSMLAFLPVLAFEGGTRRNIP 120
Query: 515 KFEVGTLLYVRIVKANVGMNPELACMDACGKAAEFGPLKDGYMFESSTGLSRMLLSSPGC 694
KFE GTL+Y R+VKAN GMNPEL+CMDA GKA+EFGPLK+GYMFESSTGLSR+LLSSP C
Sbjct: 121 KFEAGTLIYARVVKANTGMNPELSCMDASGKASEFGPLKEGYMFESSTGLSRILLSSPTC 180
Query: 695 PVLEALGKKLSFEIAVGLNGRVWVNATSPSIVILVANAIMNSESLTGVQQKIMVDKLVGR 874
PVLEALGKKLSFEIA+GLNGR WVNA +P+ ILVANAIMNSESL+ VQQKIMV+KL+ R
Sbjct: 181 PVLEALGKKLSFEIAIGLNGRNWVNAPAPATTILVANAIMNSESLSAVQQKIMVEKLLQR 240
Query: 875 M 877
+
Sbjct: 241 V 241
>XP_012478610.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Gossypium raimondii] KJB30309.1 hypothetical protein
B456_005G137000 [Gossypium raimondii]
Length = 240
Score = 388 bits (996), Expect = e-132
Identities = 189/233 (81%), Positives = 210/233 (90%)
Frame = +2
Query: 170 KPANSPTSFVDQLVVPGDVVLDLSTLANQTIKLGGGLRQDCDAVTVMKAGKLRFSKPNKY 349
K ++SP SFVD VVPGDVVLDLS++ NQTIKLGGGLRQDCDA++ MKAG LRFSKPNKY
Sbjct: 4 KQSSSPASFVDSTVVPGDVVLDLSSMTNQTIKLGGGLRQDCDAISAMKAGTLRFSKPNKY 63
Query: 350 WIESSQKRYVPSVGESVFGIVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVG 529
WIESSQKRYVP V +++ GIVVD+KADNFL+DIKGPA+ FLPVLAFEGGTRRNIPKFEVG
Sbjct: 64 WIESSQKRYVPCVEDTILGIVVDSKADNFLIDIKGPAMGFLPVLAFEGGTRRNIPKFEVG 123
Query: 530 TLLYVRIVKANVGMNPELACMDACGKAAEFGPLKDGYMFESSTGLSRMLLSSPGCPVLEA 709
TLLY+R+VKAN GMNPEL+C DA GKAAEFGPLKDGYMFE+STGLSR LLSSP CPVLEA
Sbjct: 124 TLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPACPVLEA 183
Query: 710 LGKKLSFEIAVGLNGRVWVNATSPSIVILVANAIMNSESLTGVQQKIMVDKLV 868
LGKKLSFEIAVGLNGRVWVNA SP +++VANAIMNSE L+G QQ IMVD L+
Sbjct: 184 LGKKLSFEIAVGLNGRVWVNAASPDTIVVVANAIMNSECLSGAQQIIMVDHLL 236
>XP_011071845.1 PREDICTED: putative exosome complex component rrp40 [Sesamum
indicum] XP_011071846.1 PREDICTED: putative exosome
complex component rrp40 [Sesamum indicum] XP_011071847.1
PREDICTED: putative exosome complex component rrp40
[Sesamum indicum]
Length = 240
Score = 387 bits (995), Expect = e-132
Identities = 189/237 (79%), Positives = 213/237 (89%)
Frame = +2
Query: 167 AKPANSPTSFVDQLVVPGDVVLDLSTLANQTIKLGGGLRQDCDAVTVMKAGKLRFSKPNK 346
+KP+ SP+SFVDQ V PGDVVLDLS + NQTIKLGGGLRQD D ++VMKAGKLRFSKPNK
Sbjct: 3 SKPSVSPSSFVDQQVFPGDVVLDLSKMTNQTIKLGGGLRQDGDVISVMKAGKLRFSKPNK 62
Query: 347 YWIESSQKRYVPSVGESVFGIVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEV 526
YW+ESS KRYVPS G++V GIVVD KADNFLVDIKGP LAFLPVLAFEGGTRRNIPKFE+
Sbjct: 63 YWVESSHKRYVPSAGDNVLGIVVDAKADNFLVDIKGPMLAFLPVLAFEGGTRRNIPKFEI 122
Query: 527 GTLLYVRIVKANVGMNPELACMDACGKAAEFGPLKDGYMFESSTGLSRMLLSSPGCPVLE 706
GTLLYVR+VKAN GMNPEL+CMDA GKAAE+GPLKDG+MFESSTGLSR LLS+P CPVLE
Sbjct: 123 GTLLYVRVVKANTGMNPELSCMDASGKAAEYGPLKDGFMFESSTGLSRTLLSTPTCPVLE 182
Query: 707 ALGKKLSFEIAVGLNGRVWVNATSPSIVILVANAIMNSESLTGVQQKIMVDKLVGRM 877
LGKKL+FEIAVGLNGRVWVNATSPS+++LVAN IM +ESL+ QQKI V+ L+ R+
Sbjct: 183 TLGKKLAFEIAVGLNGRVWVNATSPSVIVLVANTIMQTESLSPAQQKIKVENLLQRL 239
>XP_016666803.1 PREDICTED: putative exosome complex component rrp40 isoform X2
[Gossypium hirsutum] XP_017635430.1 PREDICTED: putative
exosome complex component rrp40 isoform X2 [Gossypium
arboreum]
Length = 240
Score = 387 bits (994), Expect = e-132
Identities = 189/233 (81%), Positives = 211/233 (90%)
Frame = +2
Query: 170 KPANSPTSFVDQLVVPGDVVLDLSTLANQTIKLGGGLRQDCDAVTVMKAGKLRFSKPNKY 349
K ++SP SFVD VVPGDVVLDLS++ +QTIKLGGGLRQDCDA++ MKAG LRFSKPNKY
Sbjct: 4 KQSSSPASFVDSTVVPGDVVLDLSSMTSQTIKLGGGLRQDCDAISAMKAGTLRFSKPNKY 63
Query: 350 WIESSQKRYVPSVGESVFGIVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVG 529
WIESSQKRYVP V +++ GIVVD+KADNFL+DIKGPA+ FLPVLAFEGGTRRNIPKFEVG
Sbjct: 64 WIESSQKRYVPCVEDTILGIVVDSKADNFLIDIKGPAMGFLPVLAFEGGTRRNIPKFEVG 123
Query: 530 TLLYVRIVKANVGMNPELACMDACGKAAEFGPLKDGYMFESSTGLSRMLLSSPGCPVLEA 709
TLLY+R+VKAN GMNPEL+C DA GKAAEFGPLKDGYMFE+STGLSR LLSSP CPVLEA
Sbjct: 124 TLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPTCPVLEA 183
Query: 710 LGKKLSFEIAVGLNGRVWVNATSPSIVILVANAIMNSESLTGVQQKIMVDKLV 868
LGKKLSFEIAVGLNGRVWVNA SP +++VANAIMNSESL+G QQ IMVD L+
Sbjct: 184 LGKKLSFEIAVGLNGRVWVNAASPDTIVVVANAIMNSESLSGAQQIIMVDHLL 236
>CDP12399.1 unnamed protein product [Coffea canephora]
Length = 240
Score = 384 bits (987), Expect = e-131
Identities = 189/237 (79%), Positives = 215/237 (90%)
Frame = +2
Query: 167 AKPANSPTSFVDQLVVPGDVVLDLSTLANQTIKLGGGLRQDCDAVTVMKAGKLRFSKPNK 346
+KP++SP +F+DQ VVPGDVVLDLST+ NQTIKLG GLRQD DA++ +KAG LRF+KPNK
Sbjct: 3 SKPSSSPPNFIDQQVVPGDVVLDLSTMTNQTIKLGSGLRQDGDAISAIKAGVLRFAKPNK 62
Query: 347 YWIESSQKRYVPSVGESVFGIVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEV 526
YW+ESSQKRYVP G++V GIVVD+++DNFLVDIKGP LAFLPVLAFEGGTRRNIPKFEV
Sbjct: 63 YWVESSQKRYVPCAGDTVLGIVVDSRSDNFLVDIKGPTLAFLPVLAFEGGTRRNIPKFEV 122
Query: 527 GTLLYVRIVKANVGMNPELACMDACGKAAEFGPLKDGYMFESSTGLSRMLLSSPGCPVLE 706
GTLLYVR+VKANVGMNPEL+CMDA GKAAEFG LKDGYMFESSTGLSRMLLSSP CPVLE
Sbjct: 123 GTLLYVRVVKANVGMNPELSCMDASGKAAEFGRLKDGYMFESSTGLSRMLLSSPTCPVLE 182
Query: 707 ALGKKLSFEIAVGLNGRVWVNATSPSIVILVANAIMNSESLTGVQQKIMVDKLVGRM 877
A GK LSFEIAVGLNGRVWVNA SP+ +ILVANAIM SESL+ VQQK +V++L+ R+
Sbjct: 183 AFGKNLSFEIAVGLNGRVWVNAESPANLILVANAIMKSESLSAVQQKFLVERLLKRV 239
>XP_016721111.1 PREDICTED: putative exosome complex component rrp40 [Gossypium
hirsutum]
Length = 240
Score = 383 bits (984), Expect = e-130
Identities = 187/233 (80%), Positives = 208/233 (89%)
Frame = +2
Query: 170 KPANSPTSFVDQLVVPGDVVLDLSTLANQTIKLGGGLRQDCDAVTVMKAGKLRFSKPNKY 349
K ++SP SFVD VVPGDVVLDLS++ NQTIKLGGGLRQDCDA++ KAG LRFSKPNKY
Sbjct: 4 KQSSSPASFVDSTVVPGDVVLDLSSMTNQTIKLGGGLRQDCDAISATKAGTLRFSKPNKY 63
Query: 350 WIESSQKRYVPSVGESVFGIVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVG 529
WIESSQKRYVP V +++ GIVVD+KADNFL+DIKGPA+ FLPVLAFEGGTRRNIPKFEVG
Sbjct: 64 WIESSQKRYVPCVEDTILGIVVDSKADNFLIDIKGPAMGFLPVLAFEGGTRRNIPKFEVG 123
Query: 530 TLLYVRIVKANVGMNPELACMDACGKAAEFGPLKDGYMFESSTGLSRMLLSSPGCPVLEA 709
TLLY+R+VKAN GMNPEL+C DA GKAAEFGPLKDGYMFE+STGL R LLSSP CPVLEA
Sbjct: 124 TLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLLRKLLSSPACPVLEA 183
Query: 710 LGKKLSFEIAVGLNGRVWVNATSPSIVILVANAIMNSESLTGVQQKIMVDKLV 868
LGKKLSFEIAVGLNGRVWVNA SP +++VANAIMNSE L+G QQ IMVD L+
Sbjct: 184 LGKKLSFEIAVGLNGRVWVNAASPDTIVVVANAIMNSECLSGAQQIIMVDHLL 236
>GAV89938.1 hypothetical protein CFOL_v3_33349, partial [Cephalotus
follicularis]
Length = 321
Score = 386 bits (992), Expect = e-130
Identities = 192/233 (82%), Positives = 209/233 (89%)
Frame = +2
Query: 170 KPANSPTSFVDQLVVPGDVVLDLSTLANQTIKLGGGLRQDCDAVTVMKAGKLRFSKPNKY 349
KP+ SPTSFV+Q VVPGDVVL+LST+ N TIKLGGGLRQD D ++V KAGKLRFSKPNK+
Sbjct: 79 KPSGSPTSFVNQKVVPGDVVLNLSTMENLTIKLGGGLRQDLDTISVTKAGKLRFSKPNKF 138
Query: 350 WIESSQKRYVPSVGESVFGIVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVG 529
W+ESSQKRYVP + V GIVVD+KADNFLVDIKGP LAFLPVLAFEGGTRRNIPKFEVG
Sbjct: 139 WVESSQKRYVPCAEDHVLGIVVDSKADNFLVDIKGPVLAFLPVLAFEGGTRRNIPKFEVG 198
Query: 530 TLLYVRIVKANVGMNPELACMDACGKAAEFGPLKDGYMFESSTGLSRMLLSSPGCPVLEA 709
TL+Y R+VKAN GMNPELAC DA GKAAEFGPLKDGYMFE STGLSRMLLSSP CPVLEA
Sbjct: 199 TLIYARVVKANPGMNPELACTDAIGKAAEFGPLKDGYMFECSTGLSRMLLSSPPCPVLEA 258
Query: 710 LGKKLSFEIAVGLNGRVWVNATSPSIVILVANAIMNSESLTGVQQKIMVDKLV 868
LGKK SFEIAVGLNGRVWVNA +PS VI+VAN IMNSESL+ VQQKIMV+KL+
Sbjct: 259 LGKKYSFEIAVGLNGRVWVNAAAPSTVIIVANVIMNSESLSAVQQKIMVEKLI 311
>OMO81471.1 Exosome complex RNA-binding protein 1/RRP40/RRP4 [Corchorus
capsularis]
Length = 240
Score = 383 bits (983), Expect = e-130
Identities = 187/233 (80%), Positives = 209/233 (89%)
Frame = +2
Query: 170 KPANSPTSFVDQLVVPGDVVLDLSTLANQTIKLGGGLRQDCDAVTVMKAGKLRFSKPNKY 349
K + SP SF+D VVPGDVVLDLS++ NQTIKLGGGLRQDCDA++VMKAG LRF+KPNKY
Sbjct: 4 KESGSPASFIDSTVVPGDVVLDLSSMTNQTIKLGGGLRQDCDAISVMKAGTLRFTKPNKY 63
Query: 350 WIESSQKRYVPSVGESVFGIVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVG 529
W+ESSQKRYVP V ++V GIVVD+KADN L+DIKGPALAFLPVLAFEGGTRRNIPKFEVG
Sbjct: 64 WVESSQKRYVPCVEDTVLGIVVDSKADNLLIDIKGPALAFLPVLAFEGGTRRNIPKFEVG 123
Query: 530 TLLYVRIVKANVGMNPELACMDACGKAAEFGPLKDGYMFESSTGLSRMLLSSPGCPVLEA 709
TLLY+R+VKAN GMNPEL+C DA GKAAEFGPLKDGYMFE+STGLSR LLSSP CPVLEA
Sbjct: 124 TLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPTCPVLEA 183
Query: 710 LGKKLSFEIAVGLNGRVWVNATSPSIVILVANAIMNSESLTGVQQKIMVDKLV 868
LGKK+SFEIAVGLNGR WVNA SP +I+VANAIMNSESL+ QQ IMV+ L+
Sbjct: 184 LGKKISFEIAVGLNGRAWVNAASPETIIVVANAIMNSESLSAAQQIIMVEHLL 236
>XP_006476772.1 PREDICTED: putative exosome complex component rrp40 [Citrus
sinensis] XP_006476773.1 PREDICTED: putative exosome
complex component rrp40 [Citrus sinensis] XP_015385315.1
PREDICTED: putative exosome complex component rrp40
[Citrus sinensis] XP_015385316.1 PREDICTED: putative
exosome complex component rrp40 [Citrus sinensis]
KDO69672.1 hypothetical protein CISIN_1g026458mg [Citrus
sinensis] KDO69673.1 hypothetical protein
CISIN_1g026458mg [Citrus sinensis]
Length = 238
Score = 381 bits (979), Expect = e-130
Identities = 190/237 (80%), Positives = 215/237 (90%)
Frame = +2
Query: 167 AKPANSPTSFVDQLVVPGDVVLDLSTLANQTIKLGGGLRQDCDAVTVMKAGKLRFSKPNK 346
AKP S + VD++VVPGDVVLDLS++ NQTIKLGGGLRQ+CD+V+V+KAGKLRFSKPNK
Sbjct: 3 AKP--STANLVDKIVVPGDVVLDLSSMTNQTIKLGGGLRQECDSVSVIKAGKLRFSKPNK 60
Query: 347 YWIESSQKRYVPSVGESVFGIVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEV 526
YW+ESSQKRYVP V ++V GIVVD KADNF VDI+GP +AFLPVLAFEGGTRRNIPKFE+
Sbjct: 61 YWVESSQKRYVPCVEDTVLGIVVDCKADNFFVDIRGPTIAFLPVLAFEGGTRRNIPKFEI 120
Query: 527 GTLLYVRIVKANVGMNPELACMDACGKAAEFGPLKDGYMFESSTGLSRMLLSSPGCPVLE 706
G+LLYVR+VKAN GMNPEL+C DA GKAAEFG LKDGYMFE+STGLSRMLLSSP CPVLE
Sbjct: 121 GSLLYVRVVKANPGMNPELSCTDASGKAAEFGLLKDGYMFETSTGLSRMLLSSPTCPVLE 180
Query: 707 ALGKKLSFEIAVGLNGRVWVNATSPSIVILVANAIMNSESLTGVQQKIMVDKLVGRM 877
LGK+LSFEIAVGLNGRVWVNA SPS V+LV+NAIMNSESL+ VQQKIMVDKL+ R+
Sbjct: 181 ELGKQLSFEIAVGLNGRVWVNAESPSTVVLVSNAIMNSESLSAVQQKIMVDKLLQRI 237
>XP_007036203.1 PREDICTED: putative exosome complex component rrp40 isoform X1
[Theobroma cacao] EOY20704.1 PNAS-3 related isoform 1
[Theobroma cacao]
Length = 240
Score = 381 bits (979), Expect = e-130
Identities = 186/233 (79%), Positives = 208/233 (89%)
Frame = +2
Query: 170 KPANSPTSFVDQLVVPGDVVLDLSTLANQTIKLGGGLRQDCDAVTVMKAGKLRFSKPNKY 349
K + SP S +D VVPGDVVLDLS++ NQTI LGGGLRQDCDA++VMKAG LRFSKPNKY
Sbjct: 4 KQSGSPPSLIDSTVVPGDVVLDLSSMTNQTIMLGGGLRQDCDAISVMKAGTLRFSKPNKY 63
Query: 350 WIESSQKRYVPSVGESVFGIVVDTKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEVG 529
W+ESSQKRY P V ++V GIVVD+KADNFL+DIKGP LAFLPVLAFEGGTRRNIPKFEVG
Sbjct: 64 WVESSQKRYTPCVEDTVLGIVVDSKADNFLIDIKGPVLAFLPVLAFEGGTRRNIPKFEVG 123
Query: 530 TLLYVRIVKANVGMNPELACMDACGKAAEFGPLKDGYMFESSTGLSRMLLSSPGCPVLEA 709
TLLY+R+VKAN GMNPEL+C DA GKAAEFGPLKDGYMFE+STGLSR LLSSP CPVLEA
Sbjct: 124 TLLYLRVVKANFGMNPELSCTDASGKAAEFGPLKDGYMFETSTGLSRKLLSSPTCPVLEA 183
Query: 710 LGKKLSFEIAVGLNGRVWVNATSPSIVILVANAIMNSESLTGVQQKIMVDKLV 868
LGKKLSFEIAVGLNGRVWVNA +P +++VANAIMNSESL+G QQ IMV+ L+
Sbjct: 184 LGKKLSFEIAVGLNGRVWVNAATPDTIVVVANAIMNSESLSGAQQIIMVEHLL 236