BLASTX nr result

ID: Panax24_contig00001120 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00001120
         (553 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KHN21197.1 Protein FAF-like, chloroplastic [Glycine soja]              58   1e-06
XP_006592358.1 PREDICTED: protein FAF-like, chloroplastic [Glyci...    57   3e-06
CDP15569.1 unnamed protein product [Coffea canephora]                  56   5e-06

>KHN21197.1 Protein FAF-like, chloroplastic [Glycine soja]
          Length = 525

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 50/134 (37%), Positives = 59/134 (44%), Gaps = 28/134 (20%)
 Frame = -2

Query: 552 SSSETGDA--EGKPKPQIEQXXXXXXXXXXXXXATKK-----------PRTFPPPIPS-- 418
           SSSETGDA  + + K Q+ +             ATKK           PR FPPP+PS  
Sbjct: 181 SSSETGDATEQEQDKEQVNEEEEEELCNYASVVATKKASASASASASPPRAFPPPLPSLS 240

Query: 417 -HQ-------MHSHRDSGRLVLEA-----DNFFQTQRQDGRXXXXXXXXXXXXLIDPEKK 277
            HQ       M SHRD+GRLVLEA      N F  QRQDGR                   
Sbjct: 241 HHQASSSVTHMRSHRDNGRLVLEAVSVPSHNNFSIQRQDGRLVL---------------- 284

Query: 276 QVFDNSRQEKEENE 235
             F N ++E+EE E
Sbjct: 285 -TFSNHQEEEEEEE 297


>XP_006592358.1 PREDICTED: protein FAF-like, chloroplastic [Glycine max] KRH25325.1
           hypothetical protein GLYMA_12G095200 [Glycine max]
          Length = 525

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 49/134 (36%), Positives = 59/134 (44%), Gaps = 28/134 (20%)
 Frame = -2

Query: 552 SSSETGDA--EGKPKPQIEQXXXXXXXXXXXXXATKK-----------PRTFPPPIPS-- 418
           SSSETGDA  + + K Q+ +             ATKK           PR FPPP+PS  
Sbjct: 181 SSSETGDATEQEQDKEQVNEEEEEELCNYASVVATKKASASASASASPPRAFPPPLPSLS 240

Query: 417 -HQ-------MHSHRDSGRLVLEA-----DNFFQTQRQDGRXXXXXXXXXXXXLIDPEKK 277
            HQ       M SHRD+GRLVL+A      N F  QRQDGR                   
Sbjct: 241 HHQASSSVTHMRSHRDNGRLVLQAVSVPSHNNFSIQRQDGRLVL---------------- 284

Query: 276 QVFDNSRQEKEENE 235
             F N ++E+EE E
Sbjct: 285 -TFSNHQEEEEEEE 297


>CDP15569.1 unnamed protein product [Coffea canephora]
          Length = 568

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 46/132 (34%), Positives = 60/132 (45%), Gaps = 28/132 (21%)
 Frame = -2

Query: 546 SETGDAEGK-------PKPQIEQXXXXXXXXXXXXXATKK---PRTFPPPIPSH------ 415
           SE GD + +       P+PQ+ Q              + +   PR+FPPP+PS       
Sbjct: 184 SEVGDVDEEKDNDQQQPQPQLSQSYEDMRIAKYHYSISSRKSGPRSFPPPLPSLAREDRA 243

Query: 414 --QMHSHRDSGRLVLEA-----DNFFQTQRQDGRXXXXXXXXXXXXLIDPEK-----KQV 271
              M SHR++GRLVLEA      N+FQ QR+DGR                E      +QV
Sbjct: 244 SVHMQSHRENGRLVLEAVSVPPQNYFQAQREDGRLRLTFISTPSSQEEAMEDDVQEFEQV 303

Query: 270 FDNSRQEKEENE 235
           FDN  +E EENE
Sbjct: 304 FDNF-EEIEENE 314


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