BLASTX nr result

ID: Panax24_contig00001011 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00001011
         (493 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017247905.1 PREDICTED: E3 ubiquitin-protein ligase Praja-2-li...    81   6e-15
KVH98488.1 Zinc finger, RING/FYVE/PHD-type [Cynara cardunculus v...    72   7e-12
XP_019224996.1 PREDICTED: uncharacterized protein LOC109206613 [...    66   1e-09
XP_009787392.1 PREDICTED: uncharacterized protein LOC104235354 [...    65   2e-09
CDO98521.1 unnamed protein product [Coffea canephora]                  62   2e-08
XP_009604770.1 PREDICTED: uncharacterized protein LOC104099468 [...    61   5e-08
XP_002273441.1 PREDICTED: uncharacterized protein LOC100268065 [...    60   2e-07
CBI15364.3 unnamed protein product, partial [Vitis vinifera]           60   2e-07
KVH99305.1 Zinc finger, RING/FYVE/PHD-type [Cynara cardunculus v...    57   2e-06
XP_015870272.1 PREDICTED: uncharacterized protein LOC107407499 [...    55   5e-06

>XP_017247905.1 PREDICTED: E3 ubiquitin-protein ligase Praja-2-like [Daucus carota
           subsp. sativus]
          Length = 462

 Score = 81.3 bits (199), Expect = 6e-15
 Identities = 62/168 (36%), Positives = 74/168 (44%), Gaps = 11/168 (6%)
 Frame = -2

Query: 474 TAHHHRSSRSQILNGD--------VSDPDSSVTNIDFFDRENQVNFVLDLFHQRVEQSSS 319
           T H  R+S     N D        V       T  D FDRENQVNFV+ +F QRVE S  
Sbjct: 61  TTHEMRTSSVSNQNDDRYESRVFGVGSEPEEETGFDLFDRENQVNFVMGMFDQRVEDSG- 119

Query: 318 DPILDPNFGEIXXXXXXXXXXXXXXXXXXXXXGFSIESHN---XXXXXXDSGFMVADCGD 148
              LDP+FG I                     GFSI+S N          SGF+ ADCGD
Sbjct: 120 ---LDPDFGVIGGNDDMGMDNLELDIGLDFGLGFSIDSRNVDDDDDEDDYSGFICADCGD 176

Query: 147 EFFXXXXXXXXXXXXXXSYNSVGADYFMDDLRVVDIESDSEDRGHEGL 4
           EFF              S + V  ++FM+ LR VDIE DS + G  G+
Sbjct: 177 EFFESVRGSGSMSDSGESSDLVEGEFFMEGLRDVDIELDSGE-GRNGV 223


>KVH98488.1 Zinc finger, RING/FYVE/PHD-type [Cynara cardunculus var. scolymus]
          Length = 444

 Score = 72.4 bits (176), Expect = 7e-12
 Identities = 50/140 (35%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
 Frame = -2

Query: 387 FDRENQVNFVLDLFHQRVEQSSSDP--------ILDPNFGEI-XXXXXXXXXXXXXXXXX 235
           FDRENQ+NFV+D+FHQRVEQS S          I+D + G +                  
Sbjct: 84  FDRENQMNFVIDMFHQRVEQSQSQSQSHSASPVIIDSDSGNLDRSLGPIGGNEGPDANDL 143

Query: 234 XXXXGFSIESHN-XXXXXXDSGFMVADCGDEFFXXXXXXXXXXXXXXSYN-SVGADYFMD 61
               GF +E +N       +SGFM+ADCGD+FF                N SVG +Y M+
Sbjct: 144 GLGLGFPVEVNNERNNGDDNSGFMLADCGDDFFVSRRTLNARSESENPSNRSVGPEYIME 203

Query: 60  DLRVVDIESDSEDRGHEGLD 1
             RV D+ SD++  G   +D
Sbjct: 204 GFRVPDLGSDTDVAGENDID 223


>XP_019224996.1 PREDICTED: uncharacterized protein LOC109206613 [Nicotiana
           attenuata] OIT32960.1 e3 ubiquitin-protein ligase ring1
           [Nicotiana attenuata]
          Length = 437

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 49/143 (34%), Positives = 62/143 (43%), Gaps = 5/143 (3%)
 Frame = -2

Query: 438 LNGDVSDPDSSVTNIDFFDRENQVNFVLDLFHQRVEQSSSD--PILDPNFGEIXXXXXXX 265
           L+ DVS+PDS +T +DF DRENQVNFV+DLF QRVEQS S    I DP+   I       
Sbjct: 73  LSDDVSEPDSVITTMDFLDRENQVNFVMDLFQQRVEQSQSSNRVISDPDLLHISEPELEA 132

Query: 264 XXXXXXXXXXXXXXGFSIE---SHNXXXXXXDSGFMVADCGDEFFXXXXXXXXXXXXXXS 94
                            ++            +SGF V DC                    
Sbjct: 133 SFGVIEGNDVMGLSSLDLDFGLGLGFCGDADNSGFHVEDCN------------------- 173

Query: 93  YNSVGADYFMDDLRVVDIESDSE 25
               G + F+  L+VVDI SDS+
Sbjct: 174 ----GPEQFVSGLQVVDIGSDSD 192


>XP_009787392.1 PREDICTED: uncharacterized protein LOC104235354 [Nicotiana
           sylvestris] XP_016502168.1 PREDICTED: uncharacterized
           protein LOC107820399 [Nicotiana tabacum]
          Length = 439

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 49/143 (34%), Positives = 63/143 (44%), Gaps = 5/143 (3%)
 Frame = -2

Query: 438 LNGDVSDPDSSVTNIDFFDRENQVNFVLDLFHQRVE--QSSSDPILDPNFGEIXXXXXXX 265
           L+ DVS+PDS +T +DF DRENQVNFV+DLF QRVE  QSS+  I DP+   I       
Sbjct: 73  LSDDVSEPDSVITTMDFLDRENQVNFVMDLFQQRVEQAQSSNRVISDPDLLHISEPELEA 132

Query: 264 XXXXXXXXXXXXXXGFSIE---SHNXXXXXXDSGFMVADCGDEFFXXXXXXXXXXXXXXS 94
                            ++            +SGF V DC                    
Sbjct: 133 SFGVIEGNDVMGLSSLDLDFGLGLGFCGDTDNSGFHVEDCD------------------- 173

Query: 93  YNSVGADYFMDDLRVVDIESDSE 25
               G + F+  L+VVDI SDS+
Sbjct: 174 ----GPEQFVSGLQVVDIGSDSD 192


>CDO98521.1 unnamed protein product [Coffea canephora]
          Length = 435

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 37/75 (49%), Positives = 43/75 (57%), Gaps = 11/75 (14%)
 Frame = -2

Query: 483 RICTAHHHRSSRSQILNGDVSDPDSSVTNIDFFDRENQVNFVLDLFHQRVEQSS------ 322
           R+ T H   S      +  VS+P+S VT  D FDRENQVNFV+DL HQRVEQS       
Sbjct: 69  RLSTLHRSSSLLVDSPSDIVSEPESVVTGADLFDRENQVNFVMDLLHQRVEQSQLSSTTC 128

Query: 321 --SDPIL---DPNFG 292
              DP +   DPNFG
Sbjct: 129 VVIDPEISDADPNFG 143


>XP_009604770.1 PREDICTED: uncharacterized protein LOC104099468 [Nicotiana
           tomentosiformis] XP_016495738.1 PREDICTED:
           uncharacterized protein LOC107814792 [Nicotiana tabacum]
          Length = 439

 Score = 61.2 bits (147), Expect = 5e-08
 Identities = 31/49 (63%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
 Frame = -2

Query: 438 LNGDVSDPDSSVTNIDFFDRENQVNFVLDLFHQRVE--QSSSDPILDPN 298
           L+ DVS+PDS +T +D  DRENQVNFV+DLF QRVE  QSS+  I DP+
Sbjct: 73  LSDDVSEPDSVITTMDLLDRENQVNFVMDLFQQRVEQVQSSTRVISDPD 121


>XP_002273441.1 PREDICTED: uncharacterized protein LOC100268065 [Vitis vinifera]
          Length = 439

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 8/56 (14%)
 Frame = -2

Query: 429 DVSDPDSSVTNIDFFDRENQVNFVLDLFHQRVEQSS--------SDPILDPNFGEI 286
           D+S+PDS +TN+D  DRENQVNFVL+LFHQRVEQS         S+ + D  FG I
Sbjct: 74  DISEPDS-ITNVDLLDRENQVNFVLNLFHQRVEQSHVMGETDLVSETLDDSGFGVI 128


>CBI15364.3 unnamed protein product, partial [Vitis vinifera]
          Length = 1427

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 8/56 (14%)
 Frame = -2

Query: 429  DVSDPDSSVTNIDFFDRENQVNFVLDLFHQRVEQSS--------SDPILDPNFGEI 286
            D+S+PDS +TN+D  DRENQVNFVL+LFHQRVEQS         S+ + D  FG I
Sbjct: 994  DISEPDS-ITNVDLLDRENQVNFVLNLFHQRVEQSHVMGETDLVSETLDDSGFGVI 1048


>KVH99305.1 Zinc finger, RING/FYVE/PHD-type [Cynara cardunculus var. scolymus]
          Length = 444

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 47/152 (30%), Positives = 63/152 (41%), Gaps = 6/152 (3%)
 Frame = -2

Query: 459 RSSRSQILNGDVSDPDSSVTNIDFFDRENQVNFVLDLFHQRVEQSS---SDPILDPNFGE 289
           R+ R+ I   + S+P         F+R+NQVNFV+D+F+ RVEQS       ++D + G 
Sbjct: 57  RTDRNPIRLSNASNP---------FERDNQVNFVIDMFNHRVEQSRVVVETDLVDCDRGF 107

Query: 288 IXXXXXXXXXXXXXXXXXXXXXGFSIESHNXXXXXXDS---GFMVADCGDEFFXXXXXXX 118
           +                     GF +E  N      +    GFMVADCGDEFF       
Sbjct: 108 VVGGGNEDIDSNELEMDFRSGLGFPVEFRNCDDDDVEDEDHGFMVADCGDEFF--VSRRT 165

Query: 117 XXXXXXXSYNSVGADYFMDDLRVVDIESDSED 22
                          YFM  L V D E D E+
Sbjct: 166 RGGGVRSELGDPNPTYFMAGLSVTDSEEDIEN 197


>XP_015870272.1 PREDICTED: uncharacterized protein LOC107407499 [Ziziphus jujuba]
          Length = 214

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
 Frame = -2

Query: 471 AHHHRSSRSQILNGDVSDPDSSVTNIDFFDRENQVNFVLDLFHQRVEQS--------SSD 316
           + H  +   + L  DVS+   S+ N D  DRENQVNFV+DLF QRVEQS        SS+
Sbjct: 62  SQHESTIHIRSLEDDVSEA-GSIANADLLDRENQVNFVMDLFQQRVEQSQVMGHSDFSSE 120

Query: 315 PILDPNFGEI 286
            + D +FG I
Sbjct: 121 ALNDSSFGVI 130


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