BLASTX nr result

ID: Panax24_contig00000899 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00000899
         (530 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM90625.1 hypothetical protein DCAR_022010 [Daucus carota subsp...    77   3e-13
XP_017256136.1 PREDICTED: probable E3 ubiquitin ligase SUD1 isof...    77   3e-13
XP_017256135.1 PREDICTED: probable E3 ubiquitin ligase SUD1 isof...    77   3e-13
EEF43655.1 ssm4 protein, putative [Ricinus communis]                   54   9e-06

>KZM90625.1 hypothetical protein DCAR_022010 [Daucus carota subsp. sativus]
          Length = 1100

 Score = 77.0 bits (188), Expect = 3e-13
 Identities = 33/50 (66%), Positives = 44/50 (88%)
 Frame = -2

Query: 529  NFGEDKEARQNETEIDSEMQDANVQDNGLILQDGEEADVGLRQRRAIRQD 380
            NFGEDKE R+N+ ++ SE+QDAN+QD  ++L +G+EADVG+RQRRAIRQD
Sbjct: 1050 NFGEDKEVRRNDPDVSSEIQDANIQDPTMVLHEGDEADVGMRQRRAIRQD 1099


>XP_017256136.1 PREDICTED: probable E3 ubiquitin ligase SUD1 isoform X2 [Daucus
            carota subsp. sativus]
          Length = 1115

 Score = 77.0 bits (188), Expect = 3e-13
 Identities = 33/50 (66%), Positives = 44/50 (88%)
 Frame = -2

Query: 529  NFGEDKEARQNETEIDSEMQDANVQDNGLILQDGEEADVGLRQRRAIRQD 380
            NFGEDKE R+N+ ++ SE+QDAN+QD  ++L +G+EADVG+RQRRAIRQD
Sbjct: 1065 NFGEDKEVRRNDPDVSSEIQDANIQDPTMVLHEGDEADVGMRQRRAIRQD 1114


>XP_017256135.1 PREDICTED: probable E3 ubiquitin ligase SUD1 isoform X1 [Daucus
            carota subsp. sativus]
          Length = 1116

 Score = 77.0 bits (188), Expect = 3e-13
 Identities = 33/50 (66%), Positives = 44/50 (88%)
 Frame = -2

Query: 529  NFGEDKEARQNETEIDSEMQDANVQDNGLILQDGEEADVGLRQRRAIRQD 380
            NFGEDKE R+N+ ++ SE+QDAN+QD  ++L +G+EADVG+RQRRAIRQD
Sbjct: 1066 NFGEDKEVRRNDPDVSSEIQDANIQDPTMVLHEGDEADVGMRQRRAIRQD 1115


>EEF43655.1 ssm4 protein, putative [Ricinus communis]
          Length = 214

 Score = 54.3 bits (129), Expect = 9e-06
 Identities = 28/51 (54%), Positives = 36/51 (70%)
 Frame = -2

Query: 529 NFGEDKEARQNETEIDSEMQDANVQDNGLILQDGEEADVGLRQRRAIRQDA 377
           NFGEDKE R+NE    SE+Q++N+Q   LI  DG E +VGLR RR  +Q+A
Sbjct: 164 NFGEDKEERENEAGTSSEVQNSNLQGADLIRNDG-EVEVGLRLRRVYQQEA 213


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