BLASTX nr result

ID: Panax24_contig00000407 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00000407
         (743 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZM83536.1 hypothetical protein DCAR_031105 [Daucus carota subsp...    72   9e-12
XP_017224377.1 PREDICTED: AMSH-like ubiquitin thioesterase 2 iso...    72   1e-11

>KZM83536.1 hypothetical protein DCAR_031105 [Daucus carota subsp. sativus]
          Length = 217

 Score = 72.4 bits (176), Expect = 9e-12
 Identities = 39/66 (59%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
 Frame = -3

Query: 645 MAAKYCGQSNLHAVTQSCP-PGISFIYTVQGAAQVSRITDVNSVHGLAKSSCEE*MASTA 469
           MA+K     + HAVTQS P PGIS I+TV+   Q+SRITDV   HGLA+SSC E   ST 
Sbjct: 1   MASKSSRLFSTHAVTQSSPSPGISHIHTVRNDTQLSRITDVGEAHGLARSSCRESTTSTV 60

Query: 468 LKDIHM 451
           LKDIH+
Sbjct: 61  LKDIHI 66


>XP_017224377.1 PREDICTED: AMSH-like ubiquitin thioesterase 2 isoform X1 [Daucus
           carota subsp. sativus] XP_017224378.1 PREDICTED:
           AMSH-like ubiquitin thioesterase 2 isoform X1 [Daucus
           carota subsp. sativus]
          Length = 238

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 39/66 (59%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
 Frame = -3

Query: 645 MAAKYCGQSNLHAVTQSCP-PGISFIYTVQGAAQVSRITDVNSVHGLAKSSCEE*MASTA 469
           MA+K     + HAVTQS P PGIS I+TV+   Q+SRITDV   HGLA+SSC E   ST 
Sbjct: 1   MASKSSRLFSTHAVTQSSPSPGISHIHTVRNDTQLSRITDVGEAHGLARSSCRESTTSTV 60

Query: 468 LKDIHM 451
           LKDIH+
Sbjct: 61  LKDIHI 66


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