BLASTX nr result

ID: Panax24_contig00000402 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00000402
         (512 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017224377.1 PREDICTED: AMSH-like ubiquitin thioesterase 2 iso...    46   5e-08
KZM83536.1 hypothetical protein DCAR_031105 [Daucus carota subsp...    46   5e-08

>XP_017224377.1 PREDICTED: AMSH-like ubiquitin thioesterase 2 isoform X1 [Daucus
           carota subsp. sativus] XP_017224378.1 PREDICTED:
           AMSH-like ubiquitin thioesterase 2 isoform X1 [Daucus
           carota subsp. sativus]
          Length = 238

 Score = 45.8 bits (107), Expect(2) = 5e-08
 Identities = 20/33 (60%), Positives = 24/33 (72%)
 Frame = +1

Query: 202 QVSRITNVNSVHGLVKSKCEESMASTALKDIHM 300
           Q+SRIT+V   HGL +S C ES  ST LKDIH+
Sbjct: 34  QLSRITDVGEAHGLARSSCRESTTSTVLKDIHI 66



 Score = 38.5 bits (88), Expect(2) = 5e-08
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = +3

Query: 93  MAAKYCGQSNLHAVTQSCPSPGISFIHTVQ 182
           MA+K     + HAVTQS PSPGIS IHTV+
Sbjct: 1   MASKSSRLFSTHAVTQSSPSPGISHIHTVR 30


>KZM83536.1 hypothetical protein DCAR_031105 [Daucus carota subsp. sativus]
          Length = 217

 Score = 45.8 bits (107), Expect(2) = 5e-08
 Identities = 20/33 (60%), Positives = 24/33 (72%)
 Frame = +1

Query: 202 QVSRITNVNSVHGLVKSKCEESMASTALKDIHM 300
           Q+SRIT+V   HGL +S C ES  ST LKDIH+
Sbjct: 34  QLSRITDVGEAHGLARSSCRESTTSTVLKDIHI 66



 Score = 38.5 bits (88), Expect(2) = 5e-08
 Identities = 19/30 (63%), Positives = 22/30 (73%)
 Frame = +3

Query: 93  MAAKYCGQSNLHAVTQSCPSPGISFIHTVQ 182
           MA+K     + HAVTQS PSPGIS IHTV+
Sbjct: 1   MASKSSRLFSTHAVTQSSPSPGISHIHTVR 30


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