BLASTX nr result

ID: Panax24_contig00000390 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00000390
         (404 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017231570.1 PREDICTED: protein STAY-GREEN, chloroplastic-like...    58   2e-07
AKA88530.1 stay green protein [Litchi chinensis]                       55   3e-06
XP_017232560.1 PREDICTED: protein STAY-GREEN, chloroplastic-like...    54   9e-06

>XP_017231570.1 PREDICTED: protein STAY-GREEN, chloroplastic-like [Daucus carota
           subsp. sativus] KZN08347.1 hypothetical protein
           DCAR_000893 [Daucus carota subsp. sativus]
          Length = 272

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 24/40 (60%), Positives = 30/40 (75%), Gaps = 3/40 (7%)
 Frame = -1

Query: 404 PCKEECSCCFPPMSSIPWPPHLPNTI---TDDTHESLPQQ 294
           PC+E CSCCFPPMSSIPWP  L N +   +D+  +SLPQ+
Sbjct: 232 PCEEACSCCFPPMSSIPWPRQLSNPVEQSSDEAIQSLPQE 271


>AKA88530.1 stay green protein [Litchi chinensis]
          Length = 268

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 23/37 (62%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
 Frame = -1

Query: 401 CKEECSCCFPPMSSIPWPPHLP-NTITDDTHESLPQQ 294
           C+E+C+CCFPPMS IPWP  LP N     TH+SL QQ
Sbjct: 231 CQEDCTCCFPPMSLIPWPQMLPHNNENHGTHQSLQQQ 267


>XP_017232560.1 PREDICTED: protein STAY-GREEN, chloroplastic-like [Daucus carota
           subsp. sativus] KZN07595.1 hypothetical protein
           DCAR_008432 [Daucus carota subsp. sativus]
          Length = 274

 Score = 53.5 bits (127), Expect = 9e-06
 Identities = 21/38 (55%), Positives = 26/38 (68%)
 Frame = -1

Query: 404 PCKEECSCCFPPMSSIPWPPHLPNTITDDTHESLPQQQ 291
           PC E+C CCFP MSSIPW  H     +D+T +SLP+ Q
Sbjct: 237 PCIEDCDCCFPTMSSIPWLQHTFTQTSDETTQSLPEHQ 274


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