BLASTX nr result

ID: Panax24_contig00000360 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00000360
         (491 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017218432.1 PREDICTED: ATP-dependent Clp protease ATP-binding...    56   4e-06
KZM88582.1 hypothetical protein DCAR_025657 [Daucus carota subsp...    56   4e-06
KVH98912.1 AAA+ ATPase domain-containing protein [Cynara cardunc...    55   8e-06

>XP_017218432.1 PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpA
            homolog CD4B, chloroplastic [Daucus carota subsp.
            sativus]
          Length = 922

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/41 (70%), Positives = 31/41 (75%)
 Frame = -1

Query: 491  LAREIKEGXXXXXXXXXDGNVTVLNGSSGAPPEALQEPVAV 369
            LAREIKEG         DGNVTVLNGSSGAPPE+L EP+AV
Sbjct: 882  LAREIKEGDSVIVDVDSDGNVTVLNGSSGAPPESLPEPIAV 922


>KZM88582.1 hypothetical protein DCAR_025657 [Daucus carota subsp. sativus]
          Length = 928

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/41 (70%), Positives = 31/41 (75%)
 Frame = -1

Query: 491  LAREIKEGXXXXXXXXXDGNVTVLNGSSGAPPEALQEPVAV 369
            LAREIKEG         DGNVTVLNGSSGAPPE+L EP+AV
Sbjct: 888  LAREIKEGDSVIVDVDSDGNVTVLNGSSGAPPESLPEPIAV 928


>KVH98912.1 AAA+ ATPase domain-containing protein [Cynara cardunculus var.
            scolymus]
          Length = 933

 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 28/41 (68%), Positives = 30/41 (73%)
 Frame = -1

Query: 491  LAREIKEGXXXXXXXXXDGNVTVLNGSSGAPPEALQEPVAV 369
            LAREIKEG         +GNVTVLNGSSGAPPEAL EP+ V
Sbjct: 893  LAREIKEGDSVIVDVDSEGNVTVLNGSSGAPPEALPEPIPV 933


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