BLASTX nr result

ID: Panax24_contig00000111 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00000111
         (521 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABF48481.1 dehydrin 8 [Panax ginseng]                                  53   9e-11
ABF48477.1 dehydrin 4 [Panax ginseng]                                  53   9e-11

>ABF48481.1 dehydrin 8 [Panax ginseng]
          Length = 229

 Score = 52.8 bits (125), Expect(2) = 9e-11
 Identities = 27/40 (67%), Positives = 27/40 (67%)
 Frame = -1

Query: 299 PAPPAAVESYATVEGEPAXXXXXXXXXXXXXIPGYHSKTS 180
           PAPPAAVESYATVEGEPA             IPGYHSKTS
Sbjct: 170 PAPPAAVESYATVEGEPAKEKKGILEKIKEKIPGYHSKTS 209



 Score = 40.8 bits (94), Expect(2) = 9e-11
 Identities = 28/65 (43%), Positives = 28/65 (43%)
 Frame = -3

Query: 516 EEEKKSSLLDKLHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDTSVPVEKI 337
           EEEKK SLLDKLHR                                    EDTSVPVEKI
Sbjct: 73  EEEKKPSLLDKLHRSGSSSSSSSSDEEEVEEGGEKKKKKKKSLKEKIHKEEDTSVPVEKI 132

Query: 336 EETVV 322
           EETVV
Sbjct: 133 EETVV 137


>ABF48477.1 dehydrin 4 [Panax ginseng]
          Length = 218

 Score = 52.8 bits (125), Expect(2) = 9e-11
 Identities = 27/40 (67%), Positives = 27/40 (67%)
 Frame = -1

Query: 299 PAPPAAVESYATVEGEPAXXXXXXXXXXXXXIPGYHSKTS 180
           PAPPAAVESYATVEGEPA             IPGYHSKTS
Sbjct: 170 PAPPAAVESYATVEGEPAKEKKGILEKIKEKIPGYHSKTS 209



 Score = 40.8 bits (94), Expect(2) = 9e-11
 Identities = 28/65 (43%), Positives = 28/65 (43%)
 Frame = -3

Query: 516 EEEKKSSLLDKLHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDTSVPVEKI 337
           EEEKK SLLDKLHR                                    EDTSVPVEKI
Sbjct: 73  EEEKKPSLLDKLHRSGSSSSSSSSDEEEVEEGGEKKKKKKKSLKEKIHKEEDTSVPVEKI 132

Query: 336 EETVV 322
           EETVV
Sbjct: 133 EETVV 137


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