BLASTX nr result
ID: Panax21_contig00039497
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00039497
(631 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 115 5e-24
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib... 102 6e-23
emb|CAH66131.1| OSIGBa0135L04.5 [Oryza sativa Indica Group] 106 4e-22
gb|EEC72938.1| hypothetical protein OsI_06800 [Oryza sativa Indi... 106 5e-22
emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera] 102 8e-22
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 115 bits (289), Expect = 5e-24
Identities = 56/152 (36%), Positives = 94/152 (61%)
Frame = -2
Query: 606 WRIGTGSQVKVWSDPWLPDDNHPYIETAIPQGM*EITVQYLCCIEESCWDLDILNDLFSL 427
WR+G G+++ +WS PW+ D+ +I++A +G+ V L +E W+++++ F+
Sbjct: 931 WRVGDGTKIDIWSAPWVGDEEGRFIKSARVEGL--EVVGDLMDVERKEWNVELIERHFNE 988
Query: 426 RDKRLILEIPLSRRAKLDCWSWSRERRGIFTVKSGYHTLMLNNRGTTQHENSNMWRKLWA 247
RD++ IL IPLS R D +W+ + G ++VK+ Y + +G + +W LW+
Sbjct: 989 RDQQCILAIPLSTRCLQDELTWAYSKDGTYSVKTAY----MLGKGGNLDDFHRVWNILWS 1044
Query: 246 LNVSAKVKHFLWRACTNSLPTMKDLRKKRVDD 151
LNVS KV+HFLWRACT+SLP K L+++ + D
Sbjct: 1045 LNVSPKVRHFLWRACTSSLPVRKVLQRRHLID 1076
>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
At1g65750-like [Vitis vinifera]
Length = 820
Score = 102 bits (255), Expect(2) = 6e-23
Identities = 59/162 (36%), Positives = 85/162 (52%), Gaps = 4/162 (2%)
Frame = -2
Query: 627 LIRK*A*WRIGTGSQVKVWSDPWLPDDNHPYIETAIPQGM*EITVQYLCCIEESCWDLDI 448
L+++ W I +G++V+VW D WLPD ++ I T G I V L I E W D
Sbjct: 385 LLKRGCYWSIASGTKVQVWGDSWLPDSSNRLIITPPVAGFDGIKVDEL--ITEGLWREDF 442
Query: 447 LNDLFSLRDKRLILEIPLSRRAKLDCWSWSRERRGIFTVKSGYHTLMLNNRGT----TQH 280
+ D F RD LIL IPL ++ D SWS + RG +T +SGY L + T +
Sbjct: 443 IRDKFMARDADLILSIPLPMSSREDQISWSFDARGEYTARSGYGALRCFRQSTALVASDV 502
Query: 279 ENSNMWRKLWALNVSAKVKHFLWRACTNSLPTMKDLRKKRVD 154
+++ +W +LW + K+ +F WRA N LPT L + VD
Sbjct: 503 DSNFVWAQLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVD 544
Score = 30.4 bits (67), Expect(2) = 6e-23
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -1
Query: 112 EDALHVLVRCSYARDIWSLSWICDNSGTEESFSSDW 5
E LH LV C ARD+W S + G SF DW
Sbjct: 557 ETTLHALVECVAARDVWDESGLAMLQGNFGSF-VDW 591
>emb|CAH66131.1| OSIGBa0135L04.5 [Oryza sativa Indica Group]
Length = 611
Score = 106 bits (265), Expect(2) = 4e-22
Identities = 60/175 (34%), Positives = 92/175 (52%), Gaps = 5/175 (2%)
Frame = -2
Query: 630 ELIRK*A*WRIGTGSQVKVWSDPWLPDDNHPYIETAIPQGM*EITVQYLCCIEESCWDLD 451
EL++K WR+G G +++W DPWLP NH + V L ++ + WD
Sbjct: 157 ELLKKGIIWRVGNGHSIRIWRDPWLPR-NHSRRPITVRGNCRTKWVADLMGVDGT-WDEQ 214
Query: 450 ILNDLFSLRDKRLILEIPLSRRAKLDCWSWSRERRGIFTVKSGYHTLML-----NNRGTT 286
++ +F D LIL I LS RA+ D +W ++ G+F+V+S Y + N G++
Sbjct: 215 VVKRIFWPMDAELILTIRLSARAEEDFLAWHPDKWGVFSVRSAYKLALQLAAIDNGSGSS 274
Query: 285 QHENSNMWRKLWALNVSAKVKHFLWRACTNSLPTMKDLRKKRVDDVNDMCTRCNI 121
+ E S W +W NV KVK F WRA TNSL TM++ K+++ + C C +
Sbjct: 275 EAETSKAWNLVWKCNVPQKVKVFTWRAATNSLATMENKNKRKL-EATGTCGICGV 328
Score = 23.9 bits (50), Expect(2) = 4e-22
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1
Query: 112 EDALHVLVRCSYARDIW 62
ED H L RC A+ +W
Sbjct: 331 EDVAHALCRCPQAKKMW 347
>gb|EEC72938.1| hypothetical protein OsI_06800 [Oryza sativa Indica Group]
Length = 556
Score = 106 bits (264), Expect(2) = 5e-22
Identities = 64/185 (34%), Positives = 92/185 (49%), Gaps = 15/185 (8%)
Frame = -2
Query: 630 ELIRK*A*WRIGTGSQVKVWSDPWLPDD--NHPYIETAIPQGM*EITVQYLCCI------ 475
EL++K WRIG G V++W DPW+P P I+ + C +
Sbjct: 323 ELLKKGIIWRIGNGKSVRLWRDPWIPRSFSRRP------------ISAKRNCRLRWVSDL 370
Query: 474 --EESCWDLDILNDLFSLRDKRLILEIPLSRRAKLDCWSWSRERRGIFTVKSGYHTLML- 304
+ WD D ++ F D IL I LS R + D +W +R G F+V+S YH +
Sbjct: 371 IDQSESWDTDKISQHFLPMDAEAILNIRLSSRLEDDFIAWHPDRLGRFSVRSAYHLAIAL 430
Query: 303 ----NNRGTTQHENSNMWRKLWALNVSAKVKHFLWRACTNSLPTMKDLRKKRVDDVNDMC 136
++ + NS W LW N KVK F WRA TNSLPT+++ +KKR +V+D+C
Sbjct: 431 AQVDEGSSSSGNGNSRAWNALWKCNAPQKVKIFAWRAITNSLPTLEN-KKKRKLEVSDIC 489
Query: 135 TRCNI 121
T C +
Sbjct: 490 TICGV 494
Score = 23.9 bits (50), Expect(2) = 5e-22
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 115 TEDALHVLVRCSYARDIW 62
+E +H L RC +AR W
Sbjct: 496 SEYVVHALFRCPHARQFW 513
>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
Length = 1413
Score = 102 bits (255), Expect(2) = 8e-22
Identities = 59/163 (36%), Positives = 87/163 (53%), Gaps = 4/163 (2%)
Frame = -2
Query: 630 ELIRK*A*WRIGTGSQVKVWSDPWLPDDNHPYIETAIPQGM*EITVQYLCCIEESCWDLD 451
+L+++ W I +G++V+VW D WLPD+++ I T G EI V L I E W D
Sbjct: 1114 DLLKRGYYWSIASGTKVQVWGDSWLPDNSNRLIITPPIAGFDEIKVDEL--ITEGLWRED 1171
Query: 450 ILNDLFSLRDKRLILEIPLSRRAKLDCWSWSRERRGIFTVKSGYHTLMLNNRG----TTQ 283
+ D F RD LIL IPL ++ D SWS + RG +T +SGY L + +
Sbjct: 1172 FIRDKFMARDADLILYIPLPMSSREDQISWSFDARGEYTARSGYGALRCFRQSAALVASD 1231
Query: 282 HENSNMWRKLWALNVSAKVKHFLWRACTNSLPTMKDLRKKRVD 154
+++ +W +LW + K+ +F WRA N LPT L + VD
Sbjct: 1232 VDSNFVWAQLWKVTTPPKILNFAWRAARNCLPTRFALTIRHVD 1274
Score = 26.6 bits (57), Expect(2) = 8e-22
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 12/38 (31%)
Frame = -1
Query: 112 EDALHVLVRCSYARDIWS------------LSWICDNS 35
E LH LV C RD+W LSWI + S
Sbjct: 1287 ETTLHALVECVATRDVWDESVVEALGVREVLSWIHERS 1324