BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039492
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containi...   218   7e-55
emb|CBI19832.3| unnamed protein product [Vitis vinifera]              217   1e-54
ref|XP_002521664.1| pentatricopeptide repeat-containing protein,...   211   7e-53
ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containi...   205   4e-51
ref|XP_002302000.1| predicted protein [Populus trichocarpa] gi|2...   205   4e-51

>ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  218 bits (554), Expect = 7e-55
 Identities = 108/165 (65%), Positives = 129/165 (78%)
 Frame = +2

Query: 80  DMKNAAIATTLNLAQNLRQTDIRAVANCYAATLQKCCPQSPISYPLSLTVHAHMIASGFR 259
           DM+NAA              ++R +AN YAA LQ+CCP +P+SY ++ TVHAHMIASGF+
Sbjct: 2   DMRNAA--------------NVRRLANQYAAQLQQCCPHNPMSYSIARTVHAHMIASGFK 47

Query: 260 PRGHILNRLINVYCKTSNLGYAHQLFDKIPEPDIVARTTLIAAHSAAGNPKLARQIFNET 439
           PRG+ILNRLI+VYCK+S+L  AH LFD+I +PDIVARTTLIAAHS+AGN  LAR+IF  T
Sbjct: 48  PRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFAT 107

Query: 440 PLSVRDTVCYNAMITGYSHNNDGNAAIELFRKMKLANFQPDNFTF 574
           PL +RDTVCYNAMITGYSHNNDG  AIELFR +    F+PDNFTF
Sbjct: 108 PLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTF 152



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 9/125 (7%)
 Frame = +2

Query: 227 VHAHMIASGFRPRGHILNRLINVYCK---------TSNLGYAHQLFDKIPEPDIVARTTL 379
           +H  ++ SG      +LN L++V+ K         +S +  A +LFD++ E D ++ TT+
Sbjct: 172 IHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTM 231

Query: 380 IAAHSAAGNPKLARQIFNETPLSVRDTVCYNAMITGYSHNNDGNAAIELFRKMKLANFQP 559
           IA +   G    ARQ  +   ++ +  V +NAMI+GY H+     A+E+FRKM L   Q 
Sbjct: 232 IAGYVRNGELDAARQFLDG--MTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQW 289

Query: 560 DNFTF 574
           D FT+
Sbjct: 290 DEFTY 294



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/120 (28%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
 Frame = +2

Query: 227 VHAHMIASGFRPRGH----ILNRLINVYCKTSNLGYAHQLFDKIPEPDIVARTTLIAAHS 394
           VHA+++ +  RP       + N L  +Y K   +  A Q+F+++P  D+V+   +++ + 
Sbjct: 313 VHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYV 372

Query: 395 AAGNPKLARQIFNETPLSVRDTVCYNAMITGYSHNNDGNAAIELFRKMKLANFQPDNFTF 574
            AG    A+  F E P   R+ + +  MI+G + N  G  +++LF +MK   F+P ++ F
Sbjct: 373 NAGRIDEAKSFFEEMP--ERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAF 430


>emb|CBI19832.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score =  217 bits (552), Expect = 1e-54
 Identities = 103/145 (71%), Positives = 123/145 (84%)
 Frame = +2

Query: 140 DIRAVANCYAATLQKCCPQSPISYPLSLTVHAHMIASGFRPRGHILNRLINVYCKTSNLG 319
           ++R +AN YAA LQ+CCP +P+SY ++ TVHAHMIASGF+PRG+ILNRLI+VYCK+S+L 
Sbjct: 6   NVRRLANQYAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLV 65

Query: 320 YAHQLFDKIPEPDIVARTTLIAAHSAAGNPKLARQIFNETPLSVRDTVCYNAMITGYSHN 499
            AH LFD+I +PDIVARTTLIAAHS+AGN  LAR+IF  TPL +RDTVCYNAMITGYSHN
Sbjct: 66  SAHHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHN 125

Query: 500 NDGNAAIELFRKMKLANFQPDNFTF 574
           NDG  AIELFR +    F+PDNFTF
Sbjct: 126 NDGFGAIELFRDLLRNGFRPDNFTF 150



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 9/125 (7%)
 Frame = +2

Query: 227 VHAHMIASGFRPRGHILNRLINVYCK---------TSNLGYAHQLFDKIPEPDIVARTTL 379
           +H  ++ SG      +LN L++V+ K         +S +  A +LFD++ E D ++ TT+
Sbjct: 170 IHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTM 229

Query: 380 IAAHSAAGNPKLARQIFNETPLSVRDTVCYNAMITGYSHNNDGNAAIELFRKMKLANFQP 559
           IA +   G    ARQ  +   ++ +  V +NAMI+GY H+     A+E+FRKM L   Q 
Sbjct: 230 IAGYVRNGELDAARQFLDG--MTEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQW 287

Query: 560 DNFTF 574
           D FT+
Sbjct: 288 DEFTY 292


>ref|XP_002521664.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539055|gb|EEF40651.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 574

 Score =  211 bits (537), Expect = 7e-53
 Identities = 100/144 (69%), Positives = 118/144 (81%)
 Frame = +2

Query: 143 IRAVANCYAATLQKCCPQSPISYPLSLTVHAHMIASGFRPRGHILNRLINVYCKTSNLGY 322
           +R  AN YA+ LQ CCPQSPISYP + T+HAHMIASGF+P GH LNRLI +YCK+S L Y
Sbjct: 11  VRTAANHYASLLQLCCPQSPISYPFARTIHAHMIASGFKPHGHTLNRLIYIYCKSSKLSY 70

Query: 323 AHQLFDKIPEPDIVARTTLIAAHSAAGNPKLARQIFNETPLSVRDTVCYNAMITGYSHNN 502
           A  LFD+IP+PDIVARTTLI A+SA G+ KLA+++F ETPL +RD V YNAMIT YSHNN
Sbjct: 71  ARSLFDEIPQPDIVARTTLINAYSATGHLKLAKEMFYETPLIMRDAVIYNAMITAYSHNN 130

Query: 503 DGNAAIELFRKMKLANFQPDNFTF 574
           DG+AAIELF  MK  +F+PDNFTF
Sbjct: 131 DGHAAIELFCDMKRNDFRPDNFTF 154



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 9/125 (7%)
 Frame = +2

Query: 227 VHAHMIASGFRPRGHILNRLINVYCK---------TSNLGYAHQLFDKIPEPDIVARTTL 379
           +H  ++ SG      +LN LI+VY K         +S +G A +LFD++P  D ++ TT+
Sbjct: 174 LHCTVVKSGTWFVTSVLNALISVYVKCASSPSVISSSLMGAARRLFDEMPVRDELSWTTI 233

Query: 380 IAAHSAAGNPKLARQIFNETPLSVRDTVCYNAMITGYSHNNDGNAAIELFRKMKLANFQP 559
           I  +    +   AR++F+   +  +  V +NAMI+GY H      A+E+FRKM LA  + 
Sbjct: 234 ITGYVKNDDLDAAREVFDG--MREKLVVVWNAMISGYMHRGLYQEALEMFRKMYLAGLKL 291

Query: 560 DNFTF 574
           D FT+
Sbjct: 292 DEFTY 296



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/120 (27%), Positives = 64/120 (53%), Gaps = 4/120 (3%)
 Frame = +2

Query: 227 VHAHMIASGFRPRGH----ILNRLINVYCKTSNLGYAHQLFDKIPEPDIVARTTLIAAHS 394
           VHA+++ +   P       + N L+ +Y K   +  A ++F+ +P  D+V+  T+++ + 
Sbjct: 315 VHAYILKTEAMPSPDFSLPVNNALVTLYWKCGKVDEAQEVFNNMPVRDLVSWNTILSGYL 374

Query: 395 AAGNPKLARQIFNETPLSVRDTVCYNAMITGYSHNNDGNAAIELFRKMKLANFQPDNFTF 574
            AG    A+  F E P   ++ + +  MI+G + N  G   ++LF +MKL  F+P ++ F
Sbjct: 375 NAGRMDEAKTFFEEMP--EKNILSWVVMISGLAQNGFGEEGLKLFNQMKLRGFEPCDYAF 432


>ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
           gi|449504088|ref|XP_004162249.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  205 bits (522), Expect = 4e-51
 Identities = 97/145 (66%), Positives = 121/145 (83%)
 Frame = +2

Query: 140 DIRAVANCYAATLQKCCPQSPISYPLSLTVHAHMIASGFRPRGHILNRLINVYCKTSNLG 319
           D+R +AN Y A L  CCPQ+  SY L+ TVH H+IASGF+ RGHI+NRLI++Y K+S+  
Sbjct: 6   DVRVLANRYFAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFV 65

Query: 320 YAHQLFDKIPEPDIVARTTLIAAHSAAGNPKLARQIFNETPLSVRDTVCYNAMITGYSHN 499
           YA +LFD+IP+PD++ARTTLI A+SA GN K+AR+IFNETPL +RDTV YNAMITGYSH 
Sbjct: 66  YARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHM 125

Query: 500 NDGNAAIELFRKMKLANFQPDNFTF 574
           NDG++AIELFR M+ ANFQPD+FTF
Sbjct: 126 NDGHSAIELFRAMRWANFQPDDFTF 150



 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 41/159 (25%), Positives = 80/159 (50%), Gaps = 4/159 (2%)
 Frame = +2

Query: 110 LNLAQNLRQTDIRAVANCYAATLQKCCPQSPISYPLSLTVHAHMIASGFRPRGHIL---- 277
           L L + +R   ++   + Y + +  C       + L   VHA+++ +   P    L    
Sbjct: 274 LTLFRKMRLLGVQVDESTYTSVISACADGG--FFLLGKQVHAYILKNELNPDRDFLLSVG 331

Query: 278 NRLINVYCKTSNLGYAHQLFDKIPEPDIVARTTLIAAHSAAGNPKLARQIFNETPLSVRD 457
           N LI +Y K   +  A ++F ++P  DI+   TL++ +  AG  + A+  F + P   ++
Sbjct: 332 NTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMP--EKN 389

Query: 458 TVCYNAMITGYSHNNDGNAAIELFRKMKLANFQPDNFTF 574
            + +  MI+G + N  G  A++LF +MKL  ++P+++ F
Sbjct: 390 LLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAF 428



 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 9/125 (7%)
 Frame = +2

Query: 227 VHAHMIASGFRPRGHILNRLINVYCK---------TSNLGYAHQLFDKIPEPDIVARTTL 379
           +H  ++  G      +LN L++VY K         +S +  A +LFD++P+ +    TTL
Sbjct: 170 MHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTL 229

Query: 380 IAAHSAAGNPKLARQIFNETPLSVRDTVCYNAMITGYSHNNDGNAAIELFRKMKLANFQP 559
           I  +   G+   AR+I +   ++ +  + +NAMI+GY H+     A+ LFRKM+L   Q 
Sbjct: 230 ITGYVRNGDLTGAREILDT--MTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQV 287

Query: 560 DNFTF 574
           D  T+
Sbjct: 288 DESTY 292


>ref|XP_002302000.1| predicted protein [Populus trichocarpa] gi|222843726|gb|EEE81273.1|
           predicted protein [Populus trichocarpa]
          Length = 797

 Score =  205 bits (522), Expect = 4e-51
 Identities = 100/144 (69%), Positives = 121/144 (84%)
 Frame = +2

Query: 143 IRAVANCYAATLQKCCPQSPISYPLSLTVHAHMIASGFRPRGHILNRLINVYCKTSNLGY 322
           IR  AN Y + LQ CC QSPISY L+  VHAHMIASGF+PRGHILNRLI++Y K+S L Y
Sbjct: 7   IRTAANRYGSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNY 66

Query: 323 AHQLFDKIPEPDIVARTTLIAAHSAAGNPKLARQIFNETPLSVRDTVCYNAMITGYSHNN 502
           A  LFD+IP+PDIVARTTLIAA+SAAG+ KL+R+IF++TPL +RD+V YNAMIT YSHN+
Sbjct: 67  ARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNH 126

Query: 503 DGNAAIELFRKMKLANFQPDNFTF 574
           DG+AAIELF  M+  NF+PDN+TF
Sbjct: 127 DGHAAIELFCDMQRDNFRPDNYTF 150



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 42/125 (33%), Positives = 66/125 (52%), Gaps = 9/125 (7%)
 Frame = +2

Query: 227 VHAHMIASGFRPRGHILNRLINVYCK---------TSNLGYAHQLFDKIPEPDIVARTTL 379
           +H  ++ SG      +LN LI+ Y K         +S +  A +LFD++P  D ++ TT+
Sbjct: 170 LHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTI 229

Query: 380 IAAHSAAGNPKLARQIFNETPLSVRDTVCYNAMITGYSHNNDGNAAIELFRKMKLANFQP 559
           I  +    +   A++  N T  S +  V +NAMI+GY+H      A E+FRKM ++  Q 
Sbjct: 230 ITGYVKNNDLDAAKEFLNGT--SKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQL 287

Query: 560 DNFTF 574
           D FTF
Sbjct: 288 DEFTF 292