BLASTX nr result
ID: Panax21_contig00039436
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00039436 (401 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002520202.1| actin binding protein, putative [Ricinus com... 100 2e-19 ref|XP_002312768.1| predicted protein [Populus trichocarpa] gi|2... 94 1e-17 emb|CBI32075.3| unnamed protein product [Vitis vinifera] 91 1e-16 emb|CBI22180.3| unnamed protein product [Vitis vinifera] 91 1e-16 ref|XP_002277455.1| PREDICTED: formin-like protein 4 [Vitis vini... 91 1e-16 >ref|XP_002520202.1| actin binding protein, putative [Ricinus communis] gi|223540694|gb|EEF42257.1| actin binding protein, putative [Ricinus communis] Length = 849 Score = 100 bits (248), Expect = 2e-19 Identities = 53/79 (67%), Positives = 63/79 (79%), Gaps = 2/79 (2%) Frame = -1 Query: 401 LVKKTTDYYQAGASKDKGAQQLQLFVIVKDFLGMVDQVCVDITRNMQKRKT-STDIXXXX 225 LV+KTT+YYQAGASK KGA LQLF I+KDFLGMVD+VC++ITRNMQ+RKT S + Sbjct: 756 LVRKTTEYYQAGASKKKGAPPLQLFAIIKDFLGMVDRVCIEITRNMQRRKTPSPNFGSSP 815 Query: 224 XSPATRA-VKFPLLPSNFM 171 SPA+R VKFP LP +FM Sbjct: 816 KSPASRVPVKFPNLPEHFM 834 >ref|XP_002312768.1| predicted protein [Populus trichocarpa] gi|222852588|gb|EEE90135.1| predicted protein [Populus trichocarpa] Length = 760 Score = 94.0 bits (232), Expect = 1e-17 Identities = 50/79 (63%), Positives = 62/79 (78%), Gaps = 2/79 (2%) Frame = -1 Query: 401 LVKKTTDYYQAGASKDKGAQQLQLFVIVKDFLGMVDQVCVDITRNMQKRKTST-DIXXXX 225 LVKKTT+YY AGASKD+ A LQLF I+KDFL MVDQVC++ITRN+Q+RKTS+ + Sbjct: 667 LVKKTTEYYHAGASKDQEAHALQLFSIIKDFLCMVDQVCIEITRNLQRRKTSSRSVESSP 726 Query: 224 XSPATR-AVKFPLLPSNFM 171 SPA+R V+FP LP +FM Sbjct: 727 KSPASRIPVRFPNLPQHFM 745 >emb|CBI32075.3| unnamed protein product [Vitis vinifera] Length = 724 Score = 90.9 bits (224), Expect = 1e-16 Identities = 49/79 (62%), Positives = 61/79 (77%), Gaps = 2/79 (2%) Frame = -1 Query: 401 LVKKTTDYYQAGASKDKGAQQLQLFVIVKDFLGMVDQVCVDITRNMQKRKTST-DIXXXX 225 LV++TT+YYQ +SK+K A +QLFVIVK+FLGMVDQVCVDI RN+Q+RKT+T + Sbjct: 630 LVRRTTEYYQPRSSKNKEASPVQLFVIVKNFLGMVDQVCVDIARNLQRRKTTTASLGSST 689 Query: 224 XSPATR-AVKFPLLPSNFM 171 SP +R VKFP LP NFM Sbjct: 690 KSPPSRIPVKFPNLPPNFM 708 >emb|CBI22180.3| unnamed protein product [Vitis vinifera] Length = 751 Score = 90.9 bits (224), Expect = 1e-16 Identities = 47/80 (58%), Positives = 58/80 (72%), Gaps = 3/80 (3%) Frame = -1 Query: 401 LVKKTTDYYQAGASKDKGAQQLQLFVIVKDFLGMVDQVCVDITRNMQKRKTST---DIXX 231 L+++TT+YYQ +SK+K A LQLF+IVKDFLGMVDQVCVDI RN+Q+RKT+T Sbjct: 656 LLRRTTEYYQPRSSKNKEASPLQLFIIVKDFLGMVDQVCVDIARNLQRRKTTTASLGPSS 715 Query: 230 XXXSPATRAVKFPLLPSNFM 171 P+ VKFP LP NFM Sbjct: 716 TKSPPSRIPVKFPNLPPNFM 735 >ref|XP_002277455.1| PREDICTED: formin-like protein 4 [Vitis vinifera] Length = 819 Score = 90.9 bits (224), Expect = 1e-16 Identities = 47/80 (58%), Positives = 58/80 (72%), Gaps = 3/80 (3%) Frame = -1 Query: 401 LVKKTTDYYQAGASKDKGAQQLQLFVIVKDFLGMVDQVCVDITRNMQKRKTST---DIXX 231 L+++TT+YYQ +SK+K A LQLF+IVKDFLGMVDQVCVDI RN+Q+RKT+T Sbjct: 724 LLRRTTEYYQPRSSKNKEASPLQLFIIVKDFLGMVDQVCVDIARNLQRRKTTTASLGPSS 783 Query: 230 XXXSPATRAVKFPLLPSNFM 171 P+ VKFP LP NFM Sbjct: 784 TKSPPSRIPVKFPNLPPNFM 803