BLASTX nr result

ID: Panax21_contig00039428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039428
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22750.3| unnamed protein product [Vitis vinifera]              167   1e-39
ref|XP_004162421.1| PREDICTED: uncharacterized LOC101214826 [Cuc...   119   2e-25
ref|XP_004148380.1| PREDICTED: uncharacterized protein LOC101214...   119   2e-25
ref|XP_002862640.1| hypothetical protein ARALYDRAFT_497372 [Arab...   112   3e-23
ref|NP_200042.4| shortage in chiasmata 1 [Arabidopsis thaliana] ...   112   4e-23

>emb|CBI22750.3| unnamed protein product [Vitis vinifera]
          Length = 1591

 Score =  167 bits (422), Expect = 1e-39
 Identities = 84/138 (60%), Positives = 107/138 (77%)
 Frame = -3

Query: 415 LRKTKYSYLAADDFTLLTLPKLKLMDCIKETRAERPSLAYHDDNMMAFFTLYAIKQMIWY 236
           L+K    +L AD + LL LPK +LMDCIK+  ++R  LA+ D+++M   TLYAIKQM WY
Sbjct: 472 LKKMLDLFLDADSYQLLRLPKERLMDCIKKLCSQRSPLAHGDESIMTLVTLYAIKQMAWY 531

Query: 235 LCYYGIHTTYLYIDKLYQSLQCLKFRLHSLQTLMLDALEKANKEMIKSHPSLSVIHGILQ 56
           LC+YGIHTT+LY+DKLYQ+L+ LK RL  LQ+L+ DA EKA+KE+ +SHPSLSVI GILQ
Sbjct: 532 LCFYGIHTTHLYLDKLYQNLEYLKCRLSLLQSLIEDAHEKADKELTRSHPSLSVIQGILQ 591

Query: 55  SNFRRSRLKILIVAERVF 2
           SN     LK+LIVAE+VF
Sbjct: 592 SNAATGNLKVLIVAEQVF 609


>ref|XP_004162421.1| PREDICTED: uncharacterized LOC101214826 [Cucumis sativus]
          Length = 1654

 Score =  119 bits (299), Expect = 2e-25
 Identities = 64/138 (46%), Positives = 91/138 (65%)
 Frame = -3

Query: 415  LRKTKYSYLAADDFTLLTLPKLKLMDCIKETRAERPSLAYHDDNMMAFFTLYAIKQMIWY 236
            LRKT   Y+A D   +L+LPK KL+DCI++    R S  Y ++ +M    LYAIKQ+ WY
Sbjct: 650  LRKTYLPYVADDYSLMLSLPKQKLIDCIEKIYL-RGSSTYWEEKIMTLAMLYAIKQIGWY 708

Query: 235  LCYYGIHTTYLYIDKLYQSLQCLKFRLHSLQTLMLDALEKANKEMIKSHPSLSVIHGILQ 56
            LC+YGI+  +LY+ KL QSL+CL+ RL  L +L+ +A    ++E+  SHP+L+ I  IL 
Sbjct: 709  LCFYGIYPAHLYLKKLCQSLECLQSRLGFLASLIEEAGNSVDREITSSHPALTTIQDILC 768

Query: 55   SNFRRSRLKILIVAERVF 2
            S    S LK+LIVA ++F
Sbjct: 769  SKTSTSTLKVLIVANQIF 786


>ref|XP_004148380.1| PREDICTED: uncharacterized protein LOC101214826 [Cucumis sativus]
          Length = 1573

 Score =  119 bits (299), Expect = 2e-25
 Identities = 64/138 (46%), Positives = 91/138 (65%)
 Frame = -3

Query: 415 LRKTKYSYLAADDFTLLTLPKLKLMDCIKETRAERPSLAYHDDNMMAFFTLYAIKQMIWY 236
           LRKT   Y+A D   +L+LPK KL+DCI++    R S  Y ++ +M    LYAIKQ+ WY
Sbjct: 551 LRKTYLPYVADDYSLMLSLPKQKLIDCIEKIYL-RGSSTYWEEKIMTLAMLYAIKQIGWY 609

Query: 235 LCYYGIHTTYLYIDKLYQSLQCLKFRLHSLQTLMLDALEKANKEMIKSHPSLSVIHGILQ 56
           LC+YGI+  +LY+ KL QSL+CL+ RL  L +L+ +A    ++E+  SHP+L+ I  IL 
Sbjct: 610 LCFYGIYPAHLYLKKLCQSLECLQSRLGFLASLIEEAGNSVDREITSSHPALTTIQDILC 669

Query: 55  SNFRRSRLKILIVAERVF 2
           S    S LK+LIVA ++F
Sbjct: 670 SKTSTSTLKVLIVANQIF 687


>ref|XP_002862640.1| hypothetical protein ARALYDRAFT_497372 [Arabidopsis lyrata subsp.
           lyrata] gi|297308283|gb|EFH38898.1| hypothetical protein
           ARALYDRAFT_497372 [Arabidopsis lyrata subsp. lyrata]
          Length = 1581

 Score =  112 bits (280), Expect = 3e-23
 Identities = 58/138 (42%), Positives = 85/138 (61%)
 Frame = -3

Query: 415 LRKTKYSYLAADDFTLLTLPKLKLMDCIKETRAERPSLAYHDDNMMAFFTLYAIKQMIWY 236
           L K +   L+ D   LL++ K KL+DCI++    +  LA  DD    F  L AIKQM WY
Sbjct: 583 LVKDESENLSEDKLKLLSISKGKLIDCIRKANVHKTQLA--DDKTFTFALLLAIKQMTWY 640

Query: 235 LCYYGIHTTYLYIDKLYQSLQCLKFRLHSLQTLMLDALEKANKEMIKSHPSLSVIHGILQ 56
           +C++GIH  YLY++KL +S   +K  LH+L + +    +    ++ +SHPSL+VI GILQ
Sbjct: 641 MCFFGIHVAYLYLNKLCRSSNPMKLGLHTLYSAVETEHKSDETDVTRSHPSLAVIQGILQ 700

Query: 55  SNFRRSRLKILIVAERVF 2
           S F +   K L++AE+VF
Sbjct: 701 SEFAQGNSKALLLAEKVF 718


>ref|NP_200042.4| shortage in chiasmata 1 [Arabidopsis thaliana]
            gi|332008813|gb|AED96196.1| shortage in chiasmata 1
            [Arabidopsis thaliana]
          Length = 1594

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/138 (41%), Positives = 85/138 (61%)
 Frame = -3

Query: 415  LRKTKYSYLAADDFTLLTLPKLKLMDCIKETRAERPSLAYHDDNMMAFFTLYAIKQMIWY 236
            L K +   L+ D   LL++ K KL+DCI++    +  LA  DD    F  L AIKQM WY
Sbjct: 603  LVKDESENLSEDKLKLLSISKGKLIDCIRKANVHKTQLA--DDKTFTFALLLAIKQMTWY 660

Query: 235  LCYYGIHTTYLYIDKLYQSLQCLKFRLHSLQTLMLDALEKANKEMIKSHPSLSVIHGILQ 56
            +C++GIH  Y+Y++K+ +S   +K  LH+L + +    +    ++ +SHPSL+VI GILQ
Sbjct: 661  MCFFGIHVAYIYLNKVCRSSNPMKIGLHTLYSAVETEHKSDETDITRSHPSLAVIQGILQ 720

Query: 55   SNFRRSRLKILIVAERVF 2
            S F R   K L++AE+VF
Sbjct: 721  SEFARGNSKALLLAEKVF 738


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