BLASTX nr result

ID: Panax21_contig00039403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039403
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004153733.1| PREDICTED: uncharacterized protein LOC101205...   136   2e-30
dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana...   135   3e-30
gb|ADU56212.1| gag-pol polyprotein [Solanum lycopersicum]             135   4e-30
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola...   134   1e-29
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ...   134   1e-29

>ref|XP_004153733.1| PREDICTED: uncharacterized protein LOC101205308, partial [Cucumis
            sativus]
          Length = 768

 Score =  136 bits (343), Expect = 2e-30
 Identities = 71/149 (47%), Positives = 95/149 (63%), Gaps = 3/149 (2%)
 Frame = +1

Query: 22   IFQKLICDQNIIKMNIRVEDMPKIVFQTRYRHCKFLVMPFGLINAPATFMYLMXXXXXXX 201
            +F K+       ++ IR  D+PK  F++RY H +F+VMPFGL NAPA FM LM       
Sbjct: 618  VFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFMVMPFGLTNAPAVFMDLMNRVFKDF 677

Query: 202  XXXXXI---DDILIYSQTKEEHA*HLRRMLEILR*KKLYAKFTKCEF*SKKMQFLGYVID 372
                 I   DDIL+YS+T+ EH  HL ++LE LR  KLYAKF+KCEF  K++ FLG+V+ 
Sbjct: 678  LDTFVIVFIDDILVYSKTEAEHEEHLHKVLETLRVNKLYAKFSKCEFWLKQVAFLGHVVS 737

Query: 373  KDEISMDRAKVEVVMSWE*PKTPTEVRIF 459
             + +S+D AK+E V SW  P T +EVR F
Sbjct: 738  SEGVSVDPAKIEAVTSWSRPSTVSEVRSF 766


>dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana triflora]
          Length = 1152

 Score =  135 bits (340), Expect = 3e-30
 Identities = 73/149 (48%), Positives = 93/149 (62%), Gaps = 3/149 (2%)
 Frame = +1

Query: 22  IFQKLICDQNIIKMNIRVEDMPKIVFQTRYRHCKFLVMPFGLINAPATFMYLMXXXXXXX 201
           +F K+       ++ I+V D PK  F TRY H +FLVMPFGL NAP+ FM LM       
Sbjct: 298 VFSKIDLRSGYHQLKIKVADRPKTAFSTRYGHYEFLVMPFGLTNAPSAFMDLMQRVFMPY 357

Query: 202 XXXXX---IDDILIYSQTKEEHA*HLRRMLEILR*KKLYAKFTKCEF*SKKMQFLGYVID 372
                   IDDILIYS+ ++EH  HLR +L+ L+ KKLYAKF+KCEF  K++ FLG+VI 
Sbjct: 358 LDKFVVVFIDDILIYSKDEKEHEEHLRIVLQTLKEKKLYAKFSKCEFWLKQVSFLGHVIS 417

Query: 373 KDEISMDRAKVEVVMSWE*PKTPTEVRIF 459
            D I +D AK+E V  W  P T TE+R F
Sbjct: 418 GDGIQVDPAKIEAVSKWPRPTTVTEIRSF 446


>gb|ADU56212.1| gag-pol polyprotein [Solanum lycopersicum]
          Length = 624

 Score =  135 bits (339), Expect = 4e-30
 Identities = 71/149 (47%), Positives = 94/149 (63%), Gaps = 3/149 (2%)
 Frame = +1

Query: 22  IFQKLICDQNIIKMNIRVEDMPKIVFQTRYRHCKFLVMPFGLINAPATFMYLMXXXXXXX 201
           +F K+       ++ IR  D+PK  F+TRY H +F+VM FGL NAPA FM LM       
Sbjct: 126 VFSKIDLRSGYHQLKIRATDVPKTAFRTRYGHYEFVVMSFGLTNAPAAFMSLMNGIFKPY 185

Query: 202 XXXXXI---DDILIYSQTKEEHA*HLRRMLEILR*KKLYAKFTKCEF*SKKMQFLGYVID 372
                I   DDILIYS++KEEH  HLR +LE+LR KKLYAKF+KCEF    + FLG+V+ 
Sbjct: 186 LDLFVIVFIDDILIYSKSKEEHEEHLRMVLEMLREKKLYAKFSKCEFWLDTVSFLGHVVS 245

Query: 373 KDEISMDRAKVEVVMSWE*PKTPTEVRIF 459
           KD + +D +K+E V +W  P   +E+R F
Sbjct: 246 KDGVMVDPSKIETVKNWVRPTNVSEIRSF 274


>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
          Length = 1602

 Score =  134 bits (336), Expect = 1e-29
 Identities = 69/148 (46%), Positives = 93/148 (62%), Gaps = 3/148 (2%)
 Frame = +1

Query: 25   FQKLICDQNIIKMNIRVEDMPKIVFQTRYRHCKFLVMPFGLINAPATFMYLMXXXXXXXX 204
            F K+       ++ +R  D+PK  F+TRY H +FLVM FGL NAPA FM LM        
Sbjct: 750  FSKIDLRSGYHQLRVRERDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFRPYL 809

Query: 205  XXXXI---DDILIYSQTKEEHA*HLRRMLEILR*KKLYAKFTKCEF*SKKMQFLGYVIDK 375
                I   DDILIYS+ +E+HA HLR +L+ L+ K+LYAKF+KCEF  K + FLG+++  
Sbjct: 810  DMFVIIFIDDILIYSRNEEDHASHLRTVLQTLKDKELYAKFSKCEFWLKSVAFLGHIVSG 869

Query: 376  DEISMDRAKVEVVMSWE*PKTPTEVRIF 459
            D I +D  K+E V +W  P +PTE+R F
Sbjct: 870  DGIKVDTRKIEAVQNWPRPTSPTEIRSF 897


>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1515

 Score =  134 bits (336), Expect = 1e-29
 Identities = 69/148 (46%), Positives = 93/148 (62%), Gaps = 3/148 (2%)
 Frame = +1

Query: 25   FQKLICDQNIIKMNIRVEDMPKIVFQTRYRHCKFLVMPFGLINAPATFMYLMXXXXXXXX 204
            F K+       ++ +R  D+PK  F+TRY H +FLVM FGL NAPA FM LM        
Sbjct: 744  FSKIDLRSGYHQLRVRERDIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFRPYL 803

Query: 205  XXXXI---DDILIYSQTKEEHA*HLRRMLEILR*KKLYAKFTKCEF*SKKMQFLGYVIDK 375
                I   DDILIYS+ +E+HA HLR +L+ L+ K+LYAKF+KCEF  K + FLG+++  
Sbjct: 804  DMFVIIFIDDILIYSRNEEDHASHLRTVLQTLKDKELYAKFSKCEFWLKSVAFLGHIVSG 863

Query: 376  DEISMDRAKVEVVMSWE*PKTPTEVRIF 459
            D I +D  K+E V +W  P +PTE+R F
Sbjct: 864  DGIKVDTRKIEAVQNWPRPTSPTEIRSF 891


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