BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00039401
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...    68   7e-10
gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc...    66   3e-09
gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]                65   4e-09
gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subc...    65   7e-09
emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]          64   1e-08

>gb|ABW81018.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 672

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 45/130 (34%), Positives = 71/130 (54%)
 Frame = +2

Query: 5   VEPMDMKRIMIDKGSSVDILYTYVYQRLDLEGWKMEVGKESPLYGFNNDSVHVVGTIKLP 184
           V   ++ RI+ID GSSVD+++    +++ +    + VG  SPL  F ++S   +GTIKLP
Sbjct: 539 VANFEVSRILIDTGSSVDLIFLSTLEKMGISRGDI-VGPPSPLVAFTSESAMSLGTIKLP 597

Query: 185 IVFGKNPQ*VQINVNFFVG*VDSAYNVILGMTTLATIQAVTYIPHFKIKFPTPNEFGEV* 364
           ++  K    V   V+F V    +AYN+ILG   +  ++AV    +  IKFPT N    + 
Sbjct: 598 VLAKK----VSKIVDFVVFDKPAAYNIILGTPWIYRMKAVPSTYYQCIKFPTSNGVETIR 653

Query: 365 GDLDIALRYY 394
           GD + +   Y
Sbjct: 654 GDQEASRTCY 663


>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1980

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/130 (28%), Positives = 68/130 (52%)
 Frame = +2

Query: 2    QVEPMDMKRIMIDKGSSVDILYTYVYQRLDLEGWKMEVGKESPLYGFNNDSVHVVGTIKL 181
            ++   +++R++ID GSS D+L+   ++++ +   ++      PL GF    VH +G I L
Sbjct: 760  EIAQCEVQRVLIDGGSSADVLFYDAFKKMQIPEDRL-TNAGVPLQGFGGQQVHAIGKISL 818

Query: 182  PIVFGKNPQ*VQINVNFFVG*VDSAYNVILGMTTLATIQAVTYIPHFKIKFPTPNEFGEV 361
             +VFGK     +  + F V  +   YN ILG +T+   +A+ +  +  +K P P     V
Sbjct: 819  QVVFGKGTNVRKEEIVFDVVDMPYQYNAILGRSTINIFEAIIHHNYICMKLPGPRGVITV 878

Query: 362  *GDLDIALRY 391
             G+  +A +Y
Sbjct: 879  RGEQLVARKY 888


>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/115 (26%), Positives = 67/115 (58%)
 Frame = +2

Query: 2   QVEPMDMKRIMIDKGSSVDILYTYVYQRLDLEGWKMEVGKESPLYGFNNDSVHVVGTIKL 181
           +++   + ++++D+GSSVDILY   ++++ +   +++   E  + GF+ + V   G I L
Sbjct: 645 EIDKFAIAKVLVDQGSSVDILYWETFKKMKIPEAEIQPYNEQ-IVGFSRERVDTKGFIDL 703

Query: 182 PIVFGKNPQ*VQINVNFFVG*VDSAYNVILGMTTLATIQAVTYIPHFKIKFPTPN 346
              FG +     IN+ + +   +++YN++LG  ++  ++A+   PH  +KFP+ N
Sbjct: 704 YTTFGDDYLSKTINIRYLLVNANTSYNILLGRPSINRLKAIVSTPHLAMKFPSVN 758


>gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1889

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 37/130 (28%), Positives = 67/130 (51%)
 Frame = +2

Query: 2    QVEPMDMKRIMIDKGSSVDILYTYVYQRLDLEGWKMEVGKESPLYGFNNDSVHVVGTIKL 181
            ++   +++R++ID GSS D+L+   ++++ +   ++      PL GF    VH +G I L
Sbjct: 760  EIAQCEVQRVLIDGGSSADVLFYDAFKKMQIPEDRL-TNAGVPLQGFGGQQVHAIGKISL 818

Query: 182  PIVFGKNPQ*VQINVNFFVG*VDSAYNVILGMTTLATIQAVTYIPHFKIKFPTPNEFGEV 361
             +VFGK     +  + F V  +   YN ILG +T+   +A+ +  +  +K P P     V
Sbjct: 819  QVVFGKGTNVRKEEIVFDVVDMPYQYNAILGRSTINIFEAIIHHNYICMKLPGPRGVITV 878

Query: 362  *GDLDIALRY 391
             G+   A +Y
Sbjct: 879  RGEQLAARKY 888


>emb|CAC33017.1| hypothetical protein [Antirrhinum hispanicum]
          Length = 1455

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
 Frame = +2

Query: 20  MKRIMIDKGSSVDILYTYVYQRLDLEGWKME--VGKESPLYGFNNDSVHVVGTIKLPIVF 193
           + R++ID GSSVD+++   +  L   G K+E  V + +PL GF+  +   +G+I L + +
Sbjct: 499 VSRVLIDTGSSVDVMFLPTFLAL---GLKIEQIVPETTPLVGFDGSTSETLGSIPLLMSW 555

Query: 194 GKNPQ*VQINVNFFV-G*VDSAYNVILGMTTLATIQAVTYIPHFKIKFPTPNEFGEV*GD 370
           G+        + F++   +   YNVI G  +L   +AV  + H K+KFP  N  GEV G+
Sbjct: 556 GRGHLRRTKEIRFWIINALAKTYNVICGRPSLCLFEAVPSVLHLKVKFPANNGIGEVKGN 615